RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Sh3bgrl3Q91VW3 93 aa16.37■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Mrps11Q9DCA2 191 aaKnown RBP16.37■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Bex1Q9R224 128 aa16.37■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Trav7-5A0A0G2JFX6 112 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm10521E9PZK0 135 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm6871L7N248 545 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Zfp36l1P23950 338 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Sumo1P63166 101 aaKnown RBP16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Fam210bQ9D8B6 190 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Chd9Q8BYH8 2885 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Ighv8-2A0A0A6YW58 119 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Olfr1016A2ASV2 309 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm26965M0QWH4 86 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Vmn1r230Q8R2A2 316 aa16.36■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Mettl8A2AUU0 281 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 CrygbP04344 175 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Ccl6P27784 116 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 GchfrP99025 84 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Ang2Q64438 145 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Lypd1Q8BLC3 141 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Olfr1445Q8VFW9 314 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Arl3Q9WUL7 182 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Tagln2Q9WVA4 199 aaKnown RBP16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm27027S4R1M6 97 aa16.35■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Itpr2Q9Z329 2701 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Tcte2E9PY37 120 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm3072F6SKY8 209 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm17654F7AXR3 209 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 MgpP19788 104 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Obox7Q4KL20 218 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Slc36a4Q8CH36 500 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Muc4Q8JZM8 3443 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Nav3Q80TN7 2359 aa16.34■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Samt1A2BED8 237 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm44501A8R0T9 150 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gm4744D3Z3S5 154 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Irf2bp2E9Q1P8 570 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 IfngP01580 155 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 P01674 108 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 RanP62827 216 aaKnown RBP16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Cbln2Q8BGU2 224 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Gatad1Q920S3 266 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 SNORCQ9CXL7 121 aa16.33■□□□□ 0.21
Ccdc88a-202ENSMUST00000109477 Igkv4-71A0A0G2JEH0 117 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 AU041133A0A0J9YVH3 498 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 4930444P10RikD3YUR1 185 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Gm26661M0QWV4 156 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Socs3O35718 225 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 SbsponQ3UPR9 264 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Znf580Q9DB38 172 aa16.33■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Trav7-1A0A0G2JEV5 112 aa16.32■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Nat8f7E0CYR6 227 aa16.32■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Gm10036E9PYL9 178 aaKnown RBP16.32■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Ndfip1Q8R0W6 221 aa16.32■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr779E9PUS9 130 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Gstp2P46425 210 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Fam173aQ501J2 229 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Gm10190Q8BSD7 107 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr968Q8VFN4 314 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 S100a1P56565 94 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Rpl23P62830 140 aaKnown RBP16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 4933415F23RikQ14BX6 153 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Spock3Q8BKV0 436 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 PgpQ8CHP8 321 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr1009Q8VFK1 314 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Lhfpl3Q9CTN8 222 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Smco4Q9JIS3 59 aa16.31■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Wnk1P83741 2377 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Zfp931A2AHM2 298 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Gm21616B6ZB74 166 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Cd84Q18PI6 329 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Glrx5Q80Y14 152 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr33Q8VGX7 318 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Derl1Q99J56 251 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Ctnnbip1Q9JJN6 81 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr159Q9QZ19 319 aa16.3■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Nsd1O88491 2588 aaKnown RBP16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Scgb1b29D2XZ31 93 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Scgb1b20E9PWZ2 93 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Ly86O88188 162 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 P01812 117 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 OpalinQ7M750 143 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr1441Q8VFV3 318 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Kcnip3Q9QXT8 256 aa16.29■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Rsg1A2A825 258 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Slc25a5P51881 298 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Ripply2Q2WG76 128 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Fbln7Q501P1 440 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Il31Q6EAL8 163 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr262Q8VFV8 312 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Olfr1228Q8VGM9 323 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Scgb3a2Q920H1 91 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Rpl15Q9CZM2 204 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Tmem89Q9DA04 169 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Fn1P11276 2477 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Trav9d-1A0A075B699 112 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Rpp30O88796 268 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Srp14P16254 110 aaKnown RBP16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Bri3P28662 125 aa16.28■□□□□ 0.2
Ccdc88a-202ENSMUST00000109477 Cml1Q9JIZ0 222 aa16.28■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms