RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Fam208bQ5DTT3 2382 aa12.71□□□□□ -0.37
Ckap4-201ENSMUST00000053871 Platr25A0A1Y7VIZ1 466 aa12.71□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr303Q8VFP0 319 aa12.71□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Fxyd4Q9D2W0 88 aa12.71□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Qrich2A0A140LIY9 2337 aa12.71□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Trav14n-3A0A075B645 120 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm13030A2APQ6 143 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm9964E9Q9S5 144 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Acrv1P50289 261 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Dnd1Q6VY05 352 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ovol1Q9WTJ2 267 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Osr1Q9WVG7 266 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ighv1-69A0A0G2JFS5 117 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ccl6P27784 116 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 9230109A22RikQ8BHE6 111 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Rbm14Q8C2Q3 669 aaKnown RBP12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Insig2Q91WG1 225 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Prpf8Q99PV0 2335 aaKnown RBP12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ovol3D3YYM0 189 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 P01723 117 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Igll1P20764 209 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Mrps21P58059 87 aa12.7□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ighv14-2A0A075B5R7 117 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 IgipA0A1B0GR74 53 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Nutf2P61971 127 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Spata46Q4FZF2 204 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Znf641Q8BZ34 422 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm9944Q8C559 102 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Uqcc3Q8K2T4 89 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Slc25a39Q9D8K8 359 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm9195A0A140LHT4 2805 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm17660B9UIU9 90 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Rpp30O88796 268 aaKnown RBP12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Prok1Q14A28 105 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Sh3bgrl2Q8BG73 107 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Plrg1Q922V4 513 aaKnown RBP12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 ChtopQ9CY57 249 aaKnown RBP12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Necap2Q9D1J1 266 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Hcfc2Q9D968 241 aa12.69□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ighv1-37A0A0A6YW32 117 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm2174F6ZVF2 133 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 LtaP09225 202 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Icam2P35330 277 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Fam216bQ8CC14 138 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ighv1-31A0A0A6YWK5 117 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 1810011H11RikE9PVZ2 95 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Rnf5O35445 180 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Tmem91Q8C581 172 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Tmed6Q9CQG0 239 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Pkd1l2Q7TN88 2461 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Tcrg-C2A0A075B5Z2 167 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Tcrg-V4A0A0B4J1J8 138 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 P01853 167 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Cd79bP15530 228 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Etfrf1Q91V16 86 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Npc2Q9Z0J0 149 aa12.68□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Saa4P31532 130 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 YrdcQ3U5F4 280 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 RprmlQ3URD2 117 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm11733Q8BQP1 125 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Lyzl1Q9CPX3 148 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ammecr1Q9JHT5 344 aaKnown RBP12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Zfp53Q9Z117 652 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm3072F6SKY8 209 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm17654F7AXR3 209 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Svs5P30933 122 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Txn2P97493 166 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Zmat4Q8BZ94 229 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr1262Q8VGN2 304 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Srd5a2Q99N99 254 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Pygo1Q9D0P5 417 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr954Q9EQB6 314 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 NbasE9Q411 2356 aa12.67□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm6904E9PVF1 202 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Vmn1r119E9Q4H3 307 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Vmn1r60G3UY47 300 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 LfngO09010 378 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Tnfsf18Q7TS55 173 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Spink2Q8BMY7 86 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Ighv1-55A0A075B5W6 117 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Nsun4C4P6S0 806 aaKnown RBP12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr150Q60895 312 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Megf10Q6DIB5 1147 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr433Q7TRV9 314 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 A730015C16RikQ8C992 119 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 C1qtnf5Q8K479 243 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Rab1bQ9D1G1 201 aa12.66□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr1245A0A1L1SQJ6 307 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm15056F6ZR08 88 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 E030018B13RikJ3QMS9 113 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr1373Q7TQT6 311 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 PgpQ8CHP8 321 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gpr87Q99MT7 358 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Golt1bQ9CR60 138 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gm11027G8JL69 66 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Olfr16Q62007 309 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Mrpl16Q99N93 251 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Tmem219Q9D123 240 aa12.65□□□□□ -0.38
Ckap4-201ENSMUST00000053871 Gfra1P97785 468 aa12.65□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms