RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Zfp648D3Z0W3 525 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Pex7P97865 318 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Lgals4Q8K419 326 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv5-12-4A0A0A6YWG4 117 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ighv1-18A0A0A6YXN4 117 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trbv3A0A0A6YYE2 117 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Tmem219Q9D123 240 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gm20878L7N244 103 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Supt4h1aP63271 117 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Znf474Q6V5K9 347 aa7.54□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 A0A286YE02 88 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Nat8b-psE0CYC6 232 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Pcp4P63054 62 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Taf15Q8BQ46 557 aaKnown RBP7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Crim1Q9JLL0 1037 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Armcx4E9PWM3 2356 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 AcacaQ5SWU9 2345 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Pax9P47242 342 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Neurog3P70661 214 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Defb4P82019 63 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gtf3aQ8VHT7 364 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Obox1Q9D350 204 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Reg4Q9D8G5 157 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trbv30A0A0B4J1P1 111 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 H2-DMb1P35737 261 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Jsrp1Q3MI48 332 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Fbxl7Q5BJ29 491 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Trav2Q5R1I9 109 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 PdpnQ62011 172 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 SNORCQ9CXL7 121 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 C1qtnf5Q8K479 243 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Parm1Q923D3 296 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ndufc2Q9CQ54 120 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Cbln3Q9JHG0 197 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Gpr179E9PY61 2293 aa7.53□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Igkv4-80A0A075B5L7 116 aa7.52□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Saa4P31532 130 aa7.52□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Hist1h1tQ07133 208 aa7.52□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Pear1Q8VIK5 1034 aa7.52□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Mrpl16Q99N93 251 aa7.52□□□□□ -1.2
Ccdc47-201ENSMUST00000002043 Ralgapa1Q6GYP7 2035 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 A0A1Y7VMQ4 148 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Efna4O08542 206 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Xcl1P47993 114 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm10912Q3UXH0 145 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Cdkn2aQ64364 169 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 HampQ9EQ21 83 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ltbp4Q8K4G1 1666 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Svs5P30933 122 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 BC048502Q80Y74 154 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 BC049762Q8C601 163 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Mogat1Q91ZV4 335 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Plpp2Q9DAX2 276 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm20379A0A087WR34 119 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Smad7O35253 426 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Igh-VJ558P01758 117 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Kif26bQ7TNC6 2112 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Col11a2Q64739 1736 aa7.52□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Trbv12-2A0A0B4J1H1 124 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Cxcl13O55038 109 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Cdkn1aP39689 159 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ypel3P61237 119 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 MdfiP70331 251 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 ElaneQ3UP87 265 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Pate2Q3UW31 111 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Immp1lQ9CQU8 166 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Pmaip1Q9JM54 103 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Rbbp6P97868 1790 aaKnown RBP7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Igkv4-71A0A0G2JEH0 117 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 P04946 108 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 P0C1Z5 52 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 SeboxP70368 190 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Smim26Q3V460 107 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Znf319Q9ERR8 581 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 HilpdaQ9JLS0 64 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Vwc2lQ505H4 222 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Clec5aQ9R007 190 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Heatr1G3X9B1 2143 aaKnown RBP7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm7075D3Z497 112 aa7.51□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm12355A2A4X6 163 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Edn1P22387 202 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Srsf3P84104 164 aaKnown RBP7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Wbp1P97764 304 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 COA4Q8BT51 87 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Mgst3Q9CPU4 153 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ndufa7Q9Z1P6 113 aaKnown RBP7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ckap5A2AGT5 2032 aaKnown RBP7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gm33815A0A087WNV3 176 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Gpx1P11352 201 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 SlpiP97430 131 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Fam19a2Q7TPG7 131 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Tcf24V9GWT9 166 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ighv1-49A0A0A6YWX2 117 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 BC035044E0CXF8 138 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Zfp36l1P23950 338 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Tal2Q62282 108 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Znf787Q8BIF9 381 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Col4a1P02463 1669 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 Ighv1-36A0A0A6YXT2 117 aa7.5□□□□□ -1.21
Ccdc47-201ENSMUST00000002043 P01649 108 aa7.5□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 34 ms