RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 GAGE2AQ6NT46 116 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 Q6ZSA8 131 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 MUSTN1Q8IVN3 82 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 SORL1Q92673 2214 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 LINC00588Q9Y4M8 146 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 IBA57-AS1B1ANH7 110 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 LELP1Q5T871 98 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 LINC00643Q86TS7 51 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 PHLDA3Q9Y5J5 127 aa4.89□□□□□ -1.63
CBWD1-219ENST00000611457 IGLV4-69A0A075B6H9 119 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 TRBV6-5A0A0K0K1A5 114 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 LEPROTO15243 131 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 MGPP08493 103 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 C11orf21Q9P2W6 132 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 LOC107984640A0A0U1RRK4 108 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 TRIAP1O43715 76 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 CRYGDP07320 174 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 LINC00315P59091 139 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 TIMM17AQ99595 171 aa4.88□□□□□ -1.63
CBWD1-219ENST00000611457 PRSS2P07478 247 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 RHOHQ15669 191 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 TENM3Q9P273 2699 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 NOTCH3Q9UM47 2321 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 IGHV3OR16-8A0A075B7F1 116 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 VCYO14598 125 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 C14orf178Q8N769 122 aaPredicted RBP4.87□□□□□ -1.63
CBWD1-219ENST00000611457 RPL39LQ96EH5 51 aaKnown RBP4.87□□□□□ -1.63
CBWD1-219ENST00000611457 APOBP04114 4563 aaKnown RBP4.87□□□□□ -1.63
CBWD1-219ENST00000611457 COX7CP15954 63 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 LYPD5Q6UWN5 251 aa4.87□□□□□ -1.63
CBWD1-219ENST00000611457 IGIPA6NJ69 53 aa4.86□□□□□ -1.63
CBWD1-219ENST00000611457 TRACP01848 142 aa4.86□□□□□ -1.63
CBWD1-219ENST00000611457 CXCL5P42830 114 aa4.86□□□□□ -1.63
CBWD1-219ENST00000611457 TSPEAR-AS2P59090 65 aa4.86□□□□□ -1.63
CBWD1-219ENST00000611457 RPL11P62913 178 aaKnown RBP4.86□□□□□ -1.63
CBWD1-219ENST00000611457 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
CBWD1-219ENST00000611457 CIRBPQ14011 172 aaKnown RBP4.86□□□□□ -1.63
CBWD1-219ENST00000611457 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
CBWD1-219ENST00000611457 IGHV3OR16-13A0A075B7E8 117 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 IGHV3-74A0A0B4J1X5 117 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 K7EQD1 137 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 ATOX1O00244 68 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 LST1O00453 97 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 AMELXQ99217 191 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 PRR34Q9NV39 138 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 RYR1P21817 5038 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 FAT3Q8TDW7 4589 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 TMEM223A0PJW6 202 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 CRYGAP11844 174 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 TRAV8-3A0A0A6YYJ7 113 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 A0A1B0GUV1 79 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 ZNF22P17026 224 aaPredicted RBP4.85□□□□□ -1.63
CBWD1-219ENST00000611457 CCL18P55774 89 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 LINC01561Q8N1V8 128 aa4.85□□□□□ -1.63
CBWD1-219ENST00000611457 LRCOL1A6NCL2 159 aa4.84□□□□□ -1.63
CBWD1-219ENST00000611457 TSHBP01222 138 aa4.84□□□□□ -1.63
CBWD1-219ENST00000611457 POLR2KP53803 58 aaKnown RBP4.84□□□□□ -1.63
CBWD1-219ENST00000611457 A0A0J9YXY3 114 aa4.84□□□□□ -1.64
CBWD1-219ENST00000611457 TMEM258P61165 79 aa4.84□□□□□ -1.64
CBWD1-219ENST00000611457 ESRGQ1W209 222 aa4.84□□□□□ -1.64
CBWD1-219ENST00000611457 KRTAP26-1Q6PEX3 210 aa4.84□□□□□ -1.64
CBWD1-219ENST00000611457 MUC4Q99102 2169 aa4.84□□□□□ -1.64
CBWD1-219ENST00000611457 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
CBWD1-219ENST00000611457 Q6ZTI0 123 aa4.83□□□□□ -1.64
CBWD1-219ENST00000611457 EPPK1P58107 5090 aaKnown RBP4.83□□□□□ -1.64
CBWD1-219ENST00000611457 F5H697 171 aa4.83□□□□□ -1.64
CBWD1-219ENST00000611457 RPL39P62891 51 aaKnown RBP4.83□□□□□ -1.64
CBWD1-219ENST00000611457 DAZ4Q86SG3 579 aaKnown RBP4.83□□□□□ -1.64
CBWD1-219ENST00000611457 CLEC2BQ92478 149 aa4.83□□□□□ -1.64
CBWD1-219ENST00000611457 TIMM21Q9BVV7 248 aa4.83□□□□□ -1.64
CBWD1-219ENST00000611457 NOP10Q9NPE3 64 aaKnown RBP4.83□□□□□ -1.64
CBWD1-219ENST00000611457 DAZ3Q9NR90 486 aaKnown RBP4.83□□□□□ -1.64
CBWD1-219ENST00000611457 TRAV12-3A0A0B4J271 114 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 TRBV27A0A0K0K1C4 114 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 RNASE4P34096 147 aaKnown RBP4.82□□□□□ -1.64
CBWD1-219ENST00000611457 C1orf134Q5TEV5 83 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 IGHV3-64A0A075B6Q5 118 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 INAFM2P0DMQ5 153 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 LRP1BQ9NZR2 4599 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 I3L3M4 83 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 PKIGQ9Y2B9 76 aa4.82□□□□□ -1.64
CBWD1-219ENST00000611457 TRAV12-2A0A075B6T6 113 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 F5H768 121 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 C5orf38Q86SI9 138 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 hADV29S1A0JD25 119 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 DEFB1P60022 68 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 MIAQ16674 131 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 HSPG2P98160 4391 aa4.81□□□□□ -1.64
CBWD1-219ENST00000611457 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 COPS9Q8WXC6 57 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 DPH3Q96FX2 82 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 IGHV3-30-3P0DP02 117 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 DAND5Q8N907 189 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 Q9H8V8 135 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 NDUFA12Q9UI09 145 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 PYGO1Q9Y3Y4 419 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 PAX4O43316 350 aa4.8□□□□□ -1.64
CBWD1-219ENST00000611457 FAT1Q14517 4588 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms