RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 SH2D6Q7Z4S9 175 aa10.32□□□□□ -0.76
CCDC12-211ENST00000604367 PRO0461Q9UI25 63 aa10.32□□□□□ -0.76
CCDC12-211ENST00000604367 DNAH3Q8TD57 4116 aa10.32□□□□□ -0.76
CCDC12-211ENST00000604367 C6orf226Q5I0X4 101 aa10.32□□□□□ -0.76
CCDC12-211ENST00000604367 CHCHD10Q8WYQ3 142 aaPredicted RBP10.32□□□□□ -0.76
CCDC12-211ENST00000604367 NBEAL1Q6ZS30 2694 aa10.31□□□□□ -0.76
CCDC12-211ENST00000604367 M0QXV9 152 aa10.31□□□□□ -0.76
CCDC12-211ENST00000604367 LYPD5Q6UWN5 251 aa10.31□□□□□ -0.76
CCDC12-211ENST00000604367 MIR7-3HGQ8N6C7 128 aa10.31□□□□□ -0.76
CCDC12-211ENST00000604367 ETDBQ3ZM63 59 aa10.31□□□□□ -0.76
CCDC12-211ENST00000604367 KPRPQ5T749 579 aaPredicted RBP10.31□□□□□ -0.76
CCDC12-211ENST00000604367 TRBV20-1A0A075B6N2 111 aa10.3□□□□□ -0.76
CCDC12-211ENST00000604367 TRIAP1O43715 76 aa10.3□□□□□ -0.76
CCDC12-211ENST00000604367 PFN2P35080 140 aa10.3□□□□□ -0.76
CCDC12-211ENST00000604367 RPL13AP40429 203 aaKnown RBP10.3□□□□□ -0.76
CCDC12-211ENST00000604367 LINC00158P58513 81 aa10.3□□□□□ -0.76
CCDC12-211ENST00000604367 NANOS2P60321 138 aaKnown RBP10.3□□□□□ -0.76
CCDC12-211ENST00000604367 CD164L2Q6UWJ8 174 aa10.29□□□□□ -0.76
CCDC12-211ENST00000604367 KLK12Q9UKR0 248 aa10.29□□□□□ -0.76
CCDC12-211ENST00000604367 C5orf47Q569G3 176 aa10.29□□□□□ -0.76
CCDC12-211ENST00000604367 F8WDY8 70 aa10.28□□□□□ -0.76
CCDC12-211ENST00000604367 COX7A2LO14548 114 aa10.28□□□□□ -0.76
CCDC12-211ENST00000604367 C2orf82Q6UX34 121 aa10.28□□□□□ -0.76
CCDC12-211ENST00000604367 COPS9Q8WXC6 57 aa10.28□□□□□ -0.76
CCDC12-211ENST00000604367 SMCPP49901 116 aaPredicted RBP10.28□□□□□ -0.76
CCDC12-211ENST00000604367 TRBV30A0A0K0K1B3 111 aa10.27□□□□□ -0.76
CCDC12-211ENST00000604367 MALP21145 153 aa10.27□□□□□ -0.76
CCDC12-211ENST00000604367 C11orf45Q8TAV5 145 aa10.27□□□□□ -0.77
CCDC12-211ENST00000604367 MRAPQ8TCY5 172 aa10.27□□□□□ -0.77
CCDC12-211ENST00000604367 DEFB121Q5J5C9 76 aa10.26□□□□□ -0.77
CCDC12-211ENST00000604367 Q8IZM0 81 aa10.26□□□□□ -0.77
CCDC12-211ENST00000604367 MGAM2Q2M2H8 2515 aa10.26□□□□□ -0.77
CCDC12-211ENST00000604367 IBA57-AS1B1ANH7 110 aa10.25□□□□□ -0.77
CCDC12-211ENST00000604367 WFDC10BQ8IUB3 73 aa10.25□□□□□ -0.77
CCDC12-211ENST00000604367 DEFB131BA0A096LNP1 70 aa10.25□□□□□ -0.77
CCDC12-211ENST00000604367 FOXI1Q12951 378 aa10.24□□□□□ -0.77
CCDC12-211ENST00000604367 GAGE12HA6NDE8 117 aa10.24□□□□□ -0.77
CCDC12-211ENST00000604367 C9JAW5 83 aa10.24□□□□□ -0.77
CCDC12-211ENST00000604367 H3BNG1 76 aa10.24□□□□□ -0.77
CCDC12-211ENST00000604367 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
CCDC12-211ENST00000604367 COX6CP09669 75 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 ENHOQ6UWT2 76 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 SMIM20Q8N5G0 67 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 UBE2WQ96B02 151 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 ATXN8Q156A1 80 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 CLEC2BQ92478 149 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 PRR34Q9NV39 138 aa10.23□□□□□ -0.77
CCDC12-211ENST00000604367 K7EIL1 84 aa10.22□□□□□ -0.77
CCDC12-211ENST00000604367 CCL18P55774 89 aa10.22□□□□□ -0.77
CCDC12-211ENST00000604367 KIAA0087Q14695 138 aa10.22□□□□□ -0.77
CCDC12-211ENST00000604367 CRPP02741 224 aa10.22□□□□□ -0.77
CCDC12-211ENST00000604367 ESRGQ1W209 222 aa10.22□□□□□ -0.77
CCDC12-211ENST00000604367 SLC25A20O43772 301 aa10.21□□□□□ -0.78
CCDC12-211ENST00000604367 LINC00526Q96FQ7 95 aa10.21□□□□□ -0.78
CCDC12-211ENST00000604367 SPATA25Q9BR10 227 aa10.2□□□□□ -0.78
CCDC12-211ENST00000604367 IGKV2-28A0A075B6P5 120 aa10.19□□□□□ -0.78
CCDC12-211ENST00000604367 IGKV2D-28P01615 120 aa10.19□□□□□ -0.78
CCDC12-211ENST00000604367 LINC01620Q4KN68 170 aa10.19□□□□□ -0.78
CCDC12-211ENST00000604367 C9orf116Q5BN46 136 aaPredicted RBP10.19□□□□□ -0.78
CCDC12-211ENST00000604367 LINC00337Q8N6G1 96 aa10.19□□□□□ -0.78
CCDC12-211ENST00000604367 C6orf223Q8N319 242 aa10.18□□□□□ -0.78
CCDC12-211ENST00000604367 PPDPFQ9H3Y8 114 aa10.18□□□□□ -0.78
CCDC12-211ENST00000604367 SPAG11BQ08648 103 aa10.17□□□□□ -0.78
CCDC12-211ENST00000604367 HUWE1Q7Z6Z7 4374 aaKnown RBP10.17□□□□□ -0.78
CCDC12-211ENST00000604367 TRAV13-2A0A0B4J235 113 aa10.17□□□□□ -0.78
CCDC12-211ENST00000604367 CXCL5P42830 114 aa10.17□□□□□ -0.78
CCDC12-211ENST00000604367 MDFIQ99750 246 aa10.17□□□□□ -0.78
CCDC12-211ENST00000604367 TM2D3Q9BRN9 247 aa10.17□□□□□ -0.78
CCDC12-211ENST00000604367 TEN1Q86WV5 123 aa10.16□□□□□ -0.78
CCDC12-211ENST00000604367 ANKRD29Q8N6D5 301 aa10.16□□□□□ -0.78
CCDC12-211ENST00000604367 J3QR89 54 aa10.15□□□□□ -0.78
CCDC12-211ENST00000604367 LST1O00453 97 aa10.15□□□□□ -0.78
CCDC12-211ENST00000604367 C10orf25Q5T742 122 aa10.15□□□□□ -0.78
CCDC12-211ENST00000604367 KLK5Q9Y337 293 aaPredicted RBP10.15□□□□□ -0.78
CCDC12-211ENST00000604367 B5MCH6 92 aa10.15□□□□□ -0.79
CCDC12-211ENST00000604367 UNQ6190/PRO20217Q6UXQ8 127 aa10.15□□□□□ -0.79
CCDC12-211ENST00000604367 TRAV8-4A0A0B4J246 113 aa10.14□□□□□ -0.79
CCDC12-211ENST00000604367 TRBV10-2A0A0K0K1G8 114 aa10.13□□□□□ -0.79
CCDC12-211ENST00000604367 OR13C6PQ8NH95 151 aa10.13□□□□□ -0.79
CCDC12-211ENST00000604367 CARD19Q96LW7 228 aa10.13□□□□□ -0.79
CCDC12-211ENST00000604367 TRAV10A0A0B4J240 114 aa10.12□□□□□ -0.79
CCDC12-211ENST00000604367 PRR3P79522 188 aaKnown RBP10.12□□□□□ -0.79
CCDC12-211ENST00000604367 COX17Q14061 63 aa10.12□□□□□ -0.79
CCDC12-211ENST00000604367 SMIM11BQ8TCY0 68 aa10.11□□□□□ -0.79
CCDC12-211ENST00000604367 PPDPFLQ8WWR9 84 aa10.11□□□□□ -0.79
CCDC12-211ENST00000604367 RPL28P46779 137 aaKnown RBP10.11□□□□□ -0.79
CCDC12-211ENST00000604367 NTN5Q8WTR8 489 aaPredicted RBP10.11□□□□□ -0.79
CCDC12-211ENST00000604367 HIGD2BQ4VC39 106 aa10.1□□□□□ -0.79
CCDC12-211ENST00000604367 FAM218AQ96MZ4 157 aa10.09□□□□□ -0.79
CCDC12-211ENST00000604367 DNHD1Q96M86 4753 aa10.09□□□□□ -0.79
CCDC12-211ENST00000604367 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
CCDC12-211ENST00000604367 IGKV2D-24A0A075B6R9 120 aa10.08□□□□□ -0.8
CCDC12-211ENST00000604367 KRTAP26-1Q6PEX3 210 aa10.08□□□□□ -0.8
CCDC12-211ENST00000604367 TEX49A0A1B0GTD5 131 aa10.07□□□□□ -0.8
CCDC12-211ENST00000604367 C1orf43Q9BWL3 253 aa10.07□□□□□ -0.8
CCDC12-211ENST00000604367 Q9HAA7 133 aa10.07□□□□□ -0.8
CCDC12-211ENST00000604367 ZNF561-AS1K7EIQ3 104 aa10.07□□□□□ -0.8
CCDC12-211ENST00000604367 C15orf53Q8NAA6 179 aa10.06□□□□□ -0.8
CCDC12-211ENST00000604367 C6orf48Q9UBA6 75 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms