RNA–Protein interactions for RNA: ENST00000585839.5

PKN1-204, Transcript of protein kinase N1, humanhuman

TSL 2

Gene PKN1, Length 3,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-204ENST00000585839 A0A087WYN8 130 aa13.01□□□□□ -0.33
PKN1-204ENST00000585839 KRTAP1-1Q07627 177 aa13.01□□□□□ -0.33
PKN1-204ENST00000585839 TRRAPQ9Y4A5 3859 aa13.01□□□□□ -0.33
PKN1-204ENST00000585839 NCR3O14931 201 aa13□□□□□ -0.33
PKN1-204ENST00000585839 SMIM11BQ8TCY0 68 aa13□□□□□ -0.33
PKN1-204ENST00000585839 LINC00959A0A1B0GUT2 108 aa13□□□□□ -0.33
PKN1-204ENST00000585839 TRBV6-4A0A1B0GX49 114 aa13□□□□□ -0.33
PKN1-204ENST00000585839 C19orf73Q9NVV2 129 aa13□□□□□ -0.33
PKN1-204ENST00000585839 SBSPONQ8IVN8 264 aa13□□□□□ -0.33
PKN1-204ENST00000585839 NSD1Q96L73 2696 aaPredicted RBP12.99□□□□□ -0.33
PKN1-204ENST00000585839 MGAM2Q2M2H8 2515 aa12.99□□□□□ -0.33
PKN1-204ENST00000585839 IGKV3D-7A0A0C4DH55 119 aa12.99□□□□□ -0.33
PKN1-204ENST00000585839 CCDC179H3BU77 68 aa12.99□□□□□ -0.33
PKN1-204ENST00000585839 SCGB1A1P11684 91 aa12.98□□□□□ -0.33
PKN1-204ENST00000585839 HILS1P60008 231 aa12.98□□□□□ -0.33
PKN1-204ENST00000585839 KLK12Q9UKR0 248 aa12.98□□□□□ -0.33
PKN1-204ENST00000585839 H3BT86 120 aa12.97□□□□□ -0.33
PKN1-204ENST00000585839 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
PKN1-204ENST00000585839 EDA2RQ9HAV5 297 aa12.97□□□□□ -0.33
PKN1-204ENST00000585839 HERV-K104P63124 156 aa12.96□□□□□ -0.33
PKN1-204ENST00000585839 C6orf223Q8N319 242 aa12.96□□□□□ -0.33
PKN1-204ENST00000585839 COPS9Q8WXC6 57 aa12.96□□□□□ -0.33
PKN1-204ENST00000585839 CSNK1G2-AS1Q8NCQ2 148 aa12.96□□□□□ -0.34
PKN1-204ENST00000585839 RETNQ9HD89 108 aa12.95□□□□□ -0.34
PKN1-204ENST00000585839 CELA1Q9UNI1 258 aa12.95□□□□□ -0.34
PKN1-204ENST00000585839 NDUFV3P56181 108 aaKnown RBP12.95□□□□□ -0.34
PKN1-204ENST00000585839 PKD1L1Q8TDX9 2849 aa12.95□□□□□ -0.34
PKN1-204ENST00000585839 PRO0255Q9UI72 69 aa12.95□□□□□ -0.34
PKN1-204ENST00000585839 TRAV13-2A0A0B4J235 113 aa12.94□□□□□ -0.34
PKN1-204ENST00000585839 FAM236AA0A1B0GUQ0 79 aa12.94□□□□□ -0.34
PKN1-204ENST00000585839 FAM236BA0A1B0GV22 79 aa12.94□□□□□ -0.34
PKN1-204ENST00000585839 COL6A5A8TX70 2615 aa12.94□□□□□ -0.34
PKN1-204ENST00000585839 IGHV4-28A0A0C4DH34 117 aa12.94□□□□□ -0.34
PKN1-204ENST00000585839 CMC4P56277 68 aaPredicted RBP12.94□□□□□ -0.34
PKN1-204ENST00000585839 C9orf129Q5T035 196 aaKnown RBP12.94□□□□□ -0.34
PKN1-204ENST00000585839 IGKV2-28A0A075B6P5 120 aa12.93□□□□□ -0.34
PKN1-204ENST00000585839 IGHV3OR16-9A0A0B4J2B5 98 aa12.93□□□□□ -0.34
PKN1-204ENST00000585839 TIMM17BO60830 172 aa12.93□□□□□ -0.34
PKN1-204ENST00000585839 IGKV2D-28P01615 120 aa12.93□□□□□ -0.34
PKN1-204ENST00000585839 FBN1P35555 2871 aaKnown RBP12.93□□□□□ -0.34
PKN1-204ENST00000585839 IL17DQ8TAD2 202 aa12.93□□□□□ -0.34
PKN1-204ENST00000585839 S100A7L2Q5SY68 101 aa12.92□□□□□ -0.34
PKN1-204ENST00000585839 CHCHD10Q8WYQ3 142 aaPredicted RBP12.92□□□□□ -0.34
PKN1-204ENST00000585839 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
PKN1-204ENST00000585839 OXLD1Q5BKU9 147 aa12.91□□□□□ -0.34
PKN1-204ENST00000585839 REG3AQ06141 175 aa12.9□□□□□ -0.34
PKN1-204ENST00000585839 HIGD2BQ4VC39 106 aa12.9□□□□□ -0.34
PKN1-204ENST00000585839 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
PKN1-204ENST00000585839 CSDC2Q9Y534 153 aaKnown RBP12.89□□□□□ -0.35
PKN1-204ENST00000585839 PRB2P02812 416 aaPredicted RBP12.89□□□□□ -0.35
PKN1-204ENST00000585839 X6R8D5 127 aa12.89□□□□□ -0.35
PKN1-204ENST00000585839 HIST1H4AP62805 103 aaKnown RBP12.88□□□□□ -0.35
PKN1-204ENST00000585839 UNQ6190/PRO20217Q6UXQ8 127 aa12.87□□□□□ -0.35
PKN1-204ENST00000585839 A0A087WZ39 114 aa12.87□□□□□ -0.35
PKN1-204ENST00000585839 OVOL2Q9BRP0 275 aa12.87□□□□□ -0.35
PKN1-204ENST00000585839 BAHCC1Q9P281 2608 aa12.87□□□□□ -0.35
PKN1-204ENST00000585839 RPL18AQ02543 176 aaKnown RBP12.85□□□□□ -0.35
PKN1-204ENST00000585839 WFDC9Q8NEX5 89 aa12.85□□□□□ -0.35
PKN1-204ENST00000585839 SHISA2Q6UWI4 295 aa12.85□□□□□ -0.35
PKN1-204ENST00000585839 SMCR5Q8TEV8 140 aa12.85□□□□□ -0.35
PKN1-204ENST00000585839 CITED1Q99966 193 aa12.85□□□□□ -0.35
PKN1-204ENST00000585839 C10orf25Q5T742 122 aa12.84□□□□□ -0.35
PKN1-204ENST00000585839 A0A087WVE0 104 aa12.83□□□□□ -0.36
PKN1-204ENST00000585839 SPAG11BQ08648 103 aa12.83□□□□□ -0.36
PKN1-204ENST00000585839 C16orf95Q9H693 158 aa12.82□□□□□ -0.36
PKN1-204ENST00000585839 NHLRC4P0CG21 123 aaPredicted RBP12.82□□□□□ -0.36
PKN1-204ENST00000585839 C6orf99Q4VX62 202 aa12.82□□□□□ -0.36
PKN1-204ENST00000585839 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
PKN1-204ENST00000585839 C9orf66Q5T8R8 295 aa12.81□□□□□ -0.36
PKN1-204ENST00000585839 LAMTOR3Q9UHA4 124 aa12.81□□□□□ -0.36
PKN1-204ENST00000585839 IGHV4-30-4P0DP06 118 aa12.79□□□□□ -0.36
PKN1-204ENST00000585839 TENM3Q9P273 2699 aa12.79□□□□□ -0.36
PKN1-204ENST00000585839 TRACP01848 142 aa12.78□□□□□ -0.36
PKN1-204ENST00000585839 MRAPQ8TCY5 172 aa12.78□□□□□ -0.36
PKN1-204ENST00000585839 CXCL5P42830 114 aa12.78□□□□□ -0.36
PKN1-204ENST00000585839 APOC4P55056 127 aa12.78□□□□□ -0.36
PKN1-204ENST00000585839 RPL28P46779 137 aaKnown RBP12.77□□□□□ -0.36
PKN1-204ENST00000585839 ANK3Q12955 4377 aaKnown RBP12.77□□□□□ -0.36
PKN1-204ENST00000585839 SPART-AS1P0CW21 52 aa12.77□□□□□ -0.37
PKN1-204ENST00000585839 SMIM20Q8N5G0 67 aa12.76□□□□□ -0.37
PKN1-204ENST00000585839 INAFM2P0DMQ5 153 aa12.76□□□□□ -0.37
PKN1-204ENST00000585839 ORMDL1Q9P0S3 153 aa12.75□□□□□ -0.37
PKN1-204ENST00000585839 CYSRT1A8MQ03 144 aa12.75□□□□□ -0.37
PKN1-204ENST00000585839 KIR2DL5BQ8NHK3 375 aa12.75□□□□□ -0.37
PKN1-204ENST00000585839 MRPL23Q16540 153 aaKnown RBP12.74□□□□□ -0.37
PKN1-204ENST00000585839 CD164L2Q6UWJ8 174 aa12.73□□□□□ -0.37
PKN1-204ENST00000585839 LINC00846Q9NV44 126 aa12.72□□□□□ -0.37
PKN1-204ENST00000585839 KLK5Q9Y337 293 aaPredicted RBP12.72□□□□□ -0.37
PKN1-204ENST00000585839 WFDC10BQ8IUB3 73 aa12.72□□□□□ -0.37
PKN1-204ENST00000585839 C9orf153Q5TBE3 101 aa12.72□□□□□ -0.37
PKN1-204ENST00000585839 H0YGX0 51 aa12.71□□□□□ -0.37
PKN1-204ENST00000585839 ZNF561-AS1K7EIQ3 104 aa12.71□□□□□ -0.38
PKN1-204ENST00000585839 Q8NDZ9 215 aa12.71□□□□□ -0.38
PKN1-204ENST00000585839 IGKV2D-24A0A075B6R9 120 aa12.7□□□□□ -0.38
PKN1-204ENST00000585839 Q8IZM0 81 aa12.7□□□□□ -0.38
PKN1-204ENST00000585839 LYRM9A8MSI8 78 aa12.68□□□□□ -0.38
PKN1-204ENST00000585839 Q6ZTC4 211 aa12.68□□□□□ -0.38
PKN1-204ENST00000585839 HAMPP81172 84 aa12.68□□□□□ -0.38
PKN1-204ENST00000585839 SCXQ7RTU7 201 aa12.68□□□□□ -0.38
PKN1-204ENST00000585839 LINC00643Q86TS7 51 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms