RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 TOMM7Q9P0U1 55 aa9.24□□□□□ -0.93
NME3-211ENST00000568561 PYGO1Q9Y3Y4 419 aa9.24□□□□□ -0.93
NME3-211ENST00000568561 LOC389332A0A1B0GUA5 103 aa9.23□□□□□ -0.93
NME3-211ENST00000568561 TSPAN13O95857 204 aa9.23□□□□□ -0.93
NME3-211ENST00000568561 TEX43Q6ZNM6 134 aa9.23□□□□□ -0.93
NME3-211ENST00000568561 MRPL18Q9H0U6 180 aaKnown RBP9.23□□□□□ -0.93
NME3-211ENST00000568561 TRAPPC1Q9Y5R8 145 aa9.23□□□□□ -0.93
NME3-211ENST00000568561 ZNF861PO60384 105 aa9.22□□□□□ -0.93
NME3-211ENST00000568561 LINC00173Q6ZV60 143 aa9.22□□□□□ -0.93
NME3-211ENST00000568561 XAGE1AQ9HD64 81 aa9.22□□□□□ -0.93
NME3-211ENST00000568561 TRGC2P03986 189 aa9.21□□□□□ -0.94
NME3-211ENST00000568561 FABP9Q0Z7S8 132 aa9.21□□□□□ -0.94
NME3-211ENST00000568561 C2orf88Q9BSF0 95 aa9.21□□□□□ -0.94
NME3-211ENST00000568561 PRSS2P07478 247 aa9.2□□□□□ -0.94
NME3-211ENST00000568561 C2orf66Q6UXQ4 117 aa9.2□□□□□ -0.94
NME3-211ENST00000568561 C22orf24Q9Y442 160 aa9.2□□□□□ -0.94
NME3-211ENST00000568561 CKS1BP61024 79 aa9.19□□□□□ -0.94
NME3-211ENST00000568561 MAP1LC3AQ9H492 121 aa9.19□□□□□ -0.94
NME3-211ENST00000568561 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
NME3-211ENST00000568561 A0A087X002 238 aa9.18□□□□□ -0.94
NME3-211ENST00000568561 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
NME3-211ENST00000568561 C6orf226Q5I0X4 101 aa9.18□□□□□ -0.94
NME3-211ENST00000568561 Q6ZN92 141 aa9.18□□□□□ -0.94
NME3-211ENST00000568561 LINC01561Q8N1V8 128 aa9.18□□□□□ -0.94
NME3-211ENST00000568561 AMELXQ99217 191 aa9.18□□□□□ -0.94
NME3-211ENST00000568561 FAT4Q6V0I7 4981 aa9.17□□□□□ -0.94
NME3-211ENST00000568561 Q8IZM0 81 aa9.17□□□□□ -0.94
NME3-211ENST00000568561 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
NME3-211ENST00000568561 VCX2Q9H322 139 aa9.17□□□□□ -0.94
NME3-211ENST00000568561 PRSS47A8MTI9 375 aa9.16□□□□□ -0.94
NME3-211ENST00000568561 NUPR1O60356 82 aa9.16□□□□□ -0.94
NME3-211ENST00000568561 Q8N8P6 123 aa9.16□□□□□ -0.94
NME3-211ENST00000568561 CDKN2A-AS1Q9UH64 79 aa9.16□□□□□ -0.94
NME3-211ENST00000568561 LAMTOR2Q9Y2Q5 125 aa9.16□□□□□ -0.94
NME3-211ENST00000568561 IGIPA6NJ69 53 aa9.14□□□□□ -0.95
NME3-211ENST00000568561 RAB5BP61020 215 aa9.14□□□□□ -0.95
NME3-211ENST00000568561 LBHQ53QV2 105 aaPredicted RBP9.14□□□□□ -0.95
NME3-211ENST00000568561 MRPL55Q7Z7F7 128 aaKnown RBP9.14□□□□□ -0.95
NME3-211ENST00000568561 F8VRH5 84 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 BCE1O60756 84 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BKO60814 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BJP06899 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BOP23527 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BBP33778 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BDP58876 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BCP62807 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST2H2BEQ16778 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 ORMDL2Q53FV1 153 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BHQ93079 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BNQ99877 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 HIST1H2BMQ99879 126 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
NME3-211ENST00000568561 TMA7Q9Y2S6 64 aaKnown RBP9.13□□□□□ -0.95
NME3-211ENST00000568561 GAGE10A6NGK3 116 aa9.12□□□□□ -0.95
NME3-211ENST00000568561 RPL37AP8A6NKH3 93 aa9.12□□□□□ -0.95
NME3-211ENST00000568561 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
NME3-211ENST00000568561 FAM19A3Q7Z5A8 133 aa9.12□□□□□ -0.95
NME3-211ENST00000568561 TYMSOSQ8TAI1 123 aa9.12□□□□□ -0.95
NME3-211ENST00000568561 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
NME3-211ENST00000568561 A0A0U1RQV1 116 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 CRYGAP11844 174 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 HERVK_113P63121 156 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 LINC00167Q96N53 147 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 RETNLBQ9BQ08 111 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 KRTAP9-2Q9BYQ4 174 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 GEMIN7Q9H840 131 aaKnown RBP9.11□□□□□ -0.95
NME3-211ENST00000568561 TP73-AS1Q9UF72 201 aa9.11□□□□□ -0.95
NME3-211ENST00000568561 MUC17Q685J3 4493 aa9.09□□□□□ -0.95
NME3-211ENST00000568561 KRTAP13-2Q52LG2 175 aa9.09□□□□□ -0.95
NME3-211ENST00000568561 SMIM1B2RUZ4 78 aa9.08□□□□□ -0.96
NME3-211ENST00000568561 NPSP0C0P6 89 aa9.08□□□□□ -0.96
NME3-211ENST00000568561 COA6Q5JTJ3 125 aaKnown RBP9.08□□□□□ -0.96
NME3-211ENST00000568561 NXT2Q9NPJ8 142 aaKnown RBP9.08□□□□□ -0.96
NME3-211ENST00000568561 LINC01546A6NGU7 62 aa9.07□□□□□ -0.96
NME3-211ENST00000568561 SEC11AP67812 179 aa9.07□□□□□ -0.96
NME3-211ENST00000568561 URB1-AS1Q96HZ7 61 aa9.07□□□□□ -0.96
NME3-211ENST00000568561 TIMM17AQ99595 171 aa9.07□□□□□ -0.96
NME3-211ENST00000568561 K7EMI3 77 aa9.06□□□□□ -0.96
NME3-211ENST00000568561 S100A6P06703 90 aa9.06□□□□□ -0.96
NME3-211ENST00000568561 CXCL5P42830 114 aa9.06□□□□□ -0.96
NME3-211ENST00000568561 PAPPA-AS1Q5QFB9 102 aa9.06□□□□□ -0.96
NME3-211ENST00000568561 COX7B2Q8TF08 81 aa9.06□□□□□ -0.96
NME3-211ENST00000568561 LINC00614P0C842 121 aa9.05□□□□□ -0.96
NME3-211ENST00000568561 UBE2AP49459 152 aa9.05□□□□□ -0.96
NME3-211ENST00000568561 LINC00310P59036 64 aa9.05□□□□□ -0.96
NME3-211ENST00000568561 BAGE3Q86Y29 109 aa9.05□□□□□ -0.96
NME3-211ENST00000568561 KRTAP13-1Q8IUC0 172 aa9.05□□□□□ -0.96
NME3-211ENST00000568561 TOMM6Q96B49 74 aa9.05□□□□□ -0.96
NME3-211ENST00000568561 SPINK8P0C7L1 97 aa9.04□□□□□ -0.96
NME3-211ENST00000568561 LCE2AQ5TA79 106 aaPredicted RBP9.04□□□□□ -0.96
NME3-211ENST00000568561 CHCHD1Q96BP2 118 aaKnown RBP9.04□□□□□ -0.96
NME3-211ENST00000568561 IGKV2-28A0A075B6P5 120 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 SERF1AO75920 110 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 IGKV2D-28P01615 120 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 NDUFA6P56556 154 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 PDZD11Q5EBL8 140 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 FA2HQ7L5A8 372 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
NME3-211ENST00000568561 SCGB3A1Q96QR1 104 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms