RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 PAPPA-AS1Q5QFB9 102 aa3.92□□□□□ -1.78
TCF4-228ENST00000565393 LINC01561Q8N1V8 128 aa3.92□□□□□ -1.78
TCF4-228ENST00000565393 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
TCF4-228ENST00000565393 A0A1B0GV90 55 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 IGIPA6NJ69 53 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 M0QXV9 152 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 CLLU1Q5K131 121 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 KRTAP11-1Q8IUC1 163 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 PRR26Q8N8Z3 221 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 SCGB3A1Q96QR1 104 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 AMELXQ99217 191 aa3.91□□□□□ -1.78
TCF4-228ENST00000565393 NPSP0C0P6 89 aa3.9□□□□□ -1.79
TCF4-228ENST00000565393 HERVK_113P63121 156 aa3.9□□□□□ -1.79
TCF4-228ENST00000565393 LBHQ53QV2 105 aaPredicted RBP3.9□□□□□ -1.79
TCF4-228ENST00000565393 C9orf129Q5T035 196 aaKnown RBP3.9□□□□□ -1.79
TCF4-228ENST00000565393 ERASQ7Z444 233 aa3.9□□□□□ -1.79
TCF4-228ENST00000565393 TOMM6Q96B49 74 aa3.9□□□□□ -1.79
TCF4-228ENST00000565393 XAGE1AQ9HD64 81 aa3.9□□□□□ -1.79
TCF4-228ENST00000565393 CDKN2A-AS1Q9UH64 79 aa3.9□□□□□ -1.79
TCF4-228ENST00000565393 TMEM218A2RU14 115 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 H0Y9J4 135 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 RAB5BP61020 215 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 UQCC3Q6UW78 93 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 LINC00173Q6ZV60 143 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 FAM19A3Q7Z5A8 133 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 KRTAP7-1Q8IUC3 87 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 Q8IZM0 81 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 C22orf24Q9Y442 160 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 VPS13BQ7Z7G8 4022 aa3.89□□□□□ -1.79
TCF4-228ENST00000565393 MYCBP2O75592 4640 aa3.88□□□□□ -1.79
TCF4-228ENST00000565393 F8VRH5 84 aa3.88□□□□□ -1.79
TCF4-228ENST00000565393 ADCYAP1P18509 176 aa3.88□□□□□ -1.79
TCF4-228ENST00000565393 TIMM17AQ99595 171 aa3.88□□□□□ -1.79
TCF4-228ENST00000565393 GNB1LQ9BYB4 327 aa3.88□□□□□ -1.79
TCF4-228ENST00000565393 CST9LQ9H4G1 147 aa3.88□□□□□ -1.79
TCF4-228ENST00000565393 IGLV1-50A0A075B6I6 118 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 TRAV9-1A0A075B6T8 112 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 TINCRA0A1B0GVN0 87 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 LINC01549A6NIU2 74 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 ZNF861PO60384 105 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 APOC3P02656 99 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 NDUFA6P56556 154 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 FABP9Q0Z7S8 132 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 PDZD11Q5EBL8 140 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 FA2HQ7L5A8 372 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 COX7B2Q8TF08 81 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 SMCO4Q9NRQ5 59 aa3.87□□□□□ -1.79
TCF4-228ENST00000565393 GAGE10A6NGK3 116 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 A6NJY4 79 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 RPL37AP8A6NKH3 93 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 SPINK8P0C7L1 97 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 CXCL5P42830 114 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 PMVKQ15126 192 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 COX19Q49B96 90 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 MRPL55Q7Z7F7 128 aaKnown RBP3.86□□□□□ -1.79
TCF4-228ENST00000565393 SEC11CQ9BY50 192 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 MRPL18Q9H0U6 180 aaKnown RBP3.86□□□□□ -1.79
TCF4-228ENST00000565393 RPS10P5Q9NQ39 176 aa3.86□□□□□ -1.79
TCF4-228ENST00000565393 CHTOPQ9Y3Y2 248 aaKnown RBP3.86□□□□□ -1.79
TCF4-228ENST00000565393 SMIM1B2RUZ4 78 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 H3BRM9 83 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 NUPR1O60356 82 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 ATP5LO75964 103 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 TSPAN13O95857 204 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 RPL13AP40429 203 aaKnown RBP3.85□□□□□ -1.79
TCF4-228ENST00000565393 RPL28P46779 137 aaKnown RBP3.85□□□□□ -1.79
TCF4-228ENST00000565393 PRR4Q16378 134 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 LINC00167Q96N53 147 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 CARHSP1Q9Y2V2 147 aaKnown RBP3.85□□□□□ -1.79
TCF4-228ENST00000565393 DNAH8Q96JB1 4490 aa3.85□□□□□ -1.79
TCF4-228ENST00000565393 LINC01546A6NGU7 62 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 HSBP1L1C9JCN9 74 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 BCE1O60756 84 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 KRTAP1-4P0C5Y4 121 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 LINC00614P0C842 121 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 PFN2P35080 140 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 SNRPEP62304 92 aaKnown RBP3.84□□□□□ -1.79
TCF4-228ENST00000565393 NKAPP1Q8N9T2 125 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 TRAPPC1Q9Y5R8 145 aa3.84□□□□□ -1.79
TCF4-228ENST00000565393 IGLV5-45A0A087WSX0 123 aa3.83□□□□□ -1.8
TCF4-228ENST00000565393 UBE2AP49459 152 aa3.83□□□□□ -1.8
TCF4-228ENST00000565393 C14orf144Q96I85 54 aa3.83□□□□□ -1.8
TCF4-228ENST00000565393 TP73-AS1Q9UF72 201 aa3.83□□□□□ -1.8
TCF4-228ENST00000565393 LRP1Q07954 4544 aaKnown RBP3.82□□□□□ -1.8
TCF4-228ENST00000565393 IGKV2-28A0A075B6P5 120 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 IGKV2D-28P01615 120 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 CRYGAP11844 174 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 RHEBQ15382 184 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 PMCHL1Q16048 86 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 TMEM170BQ5T4T1 132 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 BAGE3Q86Y29 109 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 TYMSOSQ8TAI1 123 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 ZNF625Q96I27 306 aaPredicted RBP3.82□□□□□ -1.8
TCF4-228ENST00000565393 ANAPC11Q9NYG5 84 aa3.82□□□□□ -1.8
TCF4-228ENST00000565393 TSTD3H0UI37 97 aa3.81□□□□□ -1.8
TCF4-228ENST00000565393 S100A2P29034 98 aa3.81□□□□□ -1.8
TCF4-228ENST00000565393 RPL24P83731 157 aaKnown RBP3.81□□□□□ -1.8
TCF4-228ENST00000565393 C10orf91Q5T1B1 145 aa3.81□□□□□ -1.8
TCF4-228ENST00000565393 SVBPQ8N300 66 aa3.81□□□□□ -1.8
TCF4-228ENST00000565393 ERG28Q9UKR5 140 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms