RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 NSD1Q96L73 2696 aaPredicted RBP1.11□□□□□ -2.23
VRK1-202ENST00000553683 TMSB15BA0A087X1C1 80 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 IGHV3-73A0A0B4J1V6 119 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 LOC107984156A0A0G2JMH3 177 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 CXorf51AA0A1B0GTR3 108 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 LOC101927531A0A1B0GV80 90 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 SDHAF1A6NFY7 115 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 A6NIN4 97 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 CEBPZOSA8MTT3 80 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 TMEM14DPA8MWL7 114 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 F8WEM9 126 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 SH2D1AO60880 128 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 ERC2-IT1O76042 136 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 LY6HO94772 140 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 IGKV1D-33P01593 117 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 IGKV1-33P01594 117 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 CD24P25063 80 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 S100A3P33764 101 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 IFI27P40305 119 aaPredicted RBP1.11□□□□□ -2.23
VRK1-202ENST00000553683 RPL28P46779 137 aaKnown RBP1.11□□□□□ -2.23
VRK1-202ENST00000553683 Q6ZQT0 140 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 ARL17AQ8IVW1 177 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 CLECL1Q8IZS7 167 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 ZNF563Q8TA94 476 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 MUC7Q8TAX7 377 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 SMIM7Q9BQ49 75 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 CDC42SE2Q9NRR3 84 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 TMEM14BQ9NUH8 114 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 PRO1854Q9UHT4 67 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 HERC2O95714 4834 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 IFT172Q9UG01 1749 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 FANCMQ8IYD8 2048 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 NUP205Q92621 2012 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 BRWD1Q9NSI6 2320 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 MYH6P13533 1939 aa1.11□□□□□ -2.23
VRK1-202ENST00000553683 HELZP42694 1942 aaKnown RBP1.11□□□□□ -2.23
VRK1-202ENST00000553683 USP54Q70EL1 1684 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 TANC1Q9C0D5 1861 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 PLXNA1Q9UIW2 1896 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 NBASA2RRP1 2371 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 A0A087WSZ3 146 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 TRAV1-2A0A0B4J238 106 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 PIGBOS1A0A0B4J2F0 54 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 TRBV10-3A0A0K0K1G6 114 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 A6NED7 52 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 C17orf98A8MV24 154 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 LEPROTL1O95214 131 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 IGHV3-53P01767 116 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 PRH1P02810 166 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 TRGV3P03979 118 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 PLGLAQ15195 96 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 SPTSSBQ8NFR3 76 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 LINC00467Q9BRT7 94 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 U3KQK5 164 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 NCKAP5O14513 1909 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 TCHHQ07283 1943 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 RGPD2P0DJD1 1756 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 SNRNP200O75643 2136 aaKnown RBP1.1□□□□□ -2.23
VRK1-202ENST00000553683 LMO7Q8WWI1 1683 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 HERC1Q15751 4861 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 MGAM2Q2M2H8 2515 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 ABCA13Q86UQ4 5058 aa1.1□□□□□ -2.23
VRK1-202ENST00000553683 ANKRD31Q8N7Z5 1873 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 ATG2BQ96BY7 2078 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 MED13Q9UHV7 2174 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 TRBV6-8A0A0A6YYG3 113 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 TRBV7-4A0A0J9YYF1 115 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 CLPSL1A2RUU4 121 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 LINC01549A6NIU2 74 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 CHKB-CPT1BH3BT56 60 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 H3BVH4 76 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 K7ERS5 55 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 CRPP02741 224 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 MSMBP08118 114 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 IFI6P09912 130 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 BAALC-AS2P0C853 105 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 DEFA4P12838 97 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 IL9P15248 144 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 ATXN8Q156A1 80 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 NNATQ16517 81 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 KRTAP26-1Q6PEX3 210 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 SFTA2Q6UW10 78 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 ZNF818PQ6ZRF7 136 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 Q6ZS52 159 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 C20orf166-AS1Q96NR2 134 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 LIMD2Q9BT23 127 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 GNG13Q9P2W3 67 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 FAM215AQ9Y5M1 114 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 DOCK2Q92608 1830 aa1.09□□□□□ -2.23
VRK1-202ENST00000553683 DSCAML1Q8TD84 2053 aa1.09□□□□□ -2.24
VRK1-202ENST00000553683 TENM3Q9P273 2699 aa1.09□□□□□ -2.24
VRK1-202ENST00000553683 CRYBG1Q9Y4K1 1723 aa1.09□□□□□ -2.24
VRK1-202ENST00000553683 CACNA1EQ15878 2313 aa1.09□□□□□ -2.24
VRK1-202ENST00000553683 MAP1AP78559 2803 aaPredicted RBP1.08□□□□□ -2.24
VRK1-202ENST00000553683 E9PCH4 1651 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 IGKV1D-37A0A075B6S9 117 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 IGKV1OR2-108A0A075B7D4 117 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 TRBV30A0A0K0K1B3 111 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 A0A1W2PNM2 257 aa1.08□□□□□ -2.24
VRK1-202ENST00000553683 SMIM27A0A1W2PRY6 76 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms