RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 LINC00269Q8N2A0 174 aa5□□□□□ -1.61
SMARCD1-210ENST00000551352 TMEM238C9JI98 176 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 XCL1P47992 114 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 PTTG1IPP53801 180 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 REG3AQ06141 175 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 SRSF9Q13242 221 aaKnown RBP eCLIP4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 Q6ZVH6 145 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 LITAFQ99732 161 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 COX11Q9Y6N1 276 aa4.99□□□□□ -1.61
SMARCD1-210ENST00000551352 A0A1B0GWB2 263 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 TIMM17BO60830 172 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 IGHV3-30P01768 117 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 SMIM13P0DJ93 91 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 IGHV3-30-5P0DP03 117 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 TNP2Q05952 138 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 ESRGQ1W209 222 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 C5orf38Q86SI9 138 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 WFDC10BQ8IUB3 73 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 LINC01561Q8N1V8 128 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 C15orf53Q8NAA6 179 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 COX7B2Q8TF08 81 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 CHCHD10Q8WYQ3 142 aaPredicted RBP4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 Q9H8V8 135 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 PRR34Q9NV39 138 aa4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 NHP2Q9NX24 153 aaKnown RBP4.98□□□□□ -1.61
SMARCD1-210ENST00000551352 MYCBP2O75592 4640 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 TMEM238LA0A1B0GVL6 79 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 A6NJY4 79 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 K7ERJ3 54 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 IGHV3-33P01772 117 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 CD164L2Q6UWJ8 174 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 SPANXDQ9BXN6 97 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 KRTAP1-5Q9BYS1 174 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 SPANXCQ9NY87 97 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 KLK12Q9UKR0 248 aa4.97□□□□□ -1.61
SMARCD1-210ENST00000551352 IGLV10-54A0A075B6I4 117 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 C9orf118A6NHY6 69 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 COX7A2LO14548 114 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 HERV-K104P63124 156 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 MIAQ16674 131 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 ADAMTSL4-AS1Q5T5F5 129 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 ENHOQ6UWT2 76 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 UBE2DNLQ8IWF7 75 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 RAB37Q96AX2 223 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 TOMM7Q9P0U1 55 aa4.96□□□□□ -1.62
SMARCD1-210ENST00000551352 CRPP02741 224 aa4.95□□□□□ -1.62
SMARCD1-210ENST00000551352 FOXI1Q12951 378 aa4.95□□□□□ -1.62
SMARCD1-210ENST00000551352 CIRBPQ14011 172 aaKnown RBP4.95□□□□□ -1.62
SMARCD1-210ENST00000551352 LINC01556Q5JQF7 62 aa4.95□□□□□ -1.62
SMARCD1-210ENST00000551352 MUSTN1Q8IVN3 82 aa4.95□□□□□ -1.62
SMARCD1-210ENST00000551352 UBE2WQ96B02 151 aa4.95□□□□□ -1.62
SMARCD1-210ENST00000551352 TRAV8-4A0A0B4J246 113 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 A4D1N5 150 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 H3BUT2 72 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 IFITM1P13164 125 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 RPL24P83731 157 aaKnown RBP4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 MEIG1Q5JSS6 88 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 C1orf134Q5TEV5 83 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 SFTA2Q6UW10 78 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 Q8IZM0 81 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 LINC00588Q9Y4M8 146 aa4.94□□□□□ -1.62
SMARCD1-210ENST00000551352 NBDYA0A0U1RRE5 68 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 APOMO95445 188 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 PRSS2P07478 247 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 DNAH10OSP0CZ25 163 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 MALP21145 153 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 KRTAP10-2P60368 255 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 VAMP3Q15836 100 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 C6orf226Q5I0X4 101 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 DAND5Q8N907 189 aa4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 NAA38Q9BRA0 125 aaKnown RBP4.93□□□□□ -1.62
SMARCD1-210ENST00000551352 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 A0A0B4J2C4 111 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 A0A0U1RRA0 63 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 A0A1W2PPM0 123 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 IBA57-AS1B1ANH7 110 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 EIF4EBP3O60516 100 aaPredicted RBP4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 CDK2AP2O75956 126 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 CFC1BP0CG36 223 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 CFC1P0CG37 223 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 CXCL5P42830 114 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 CCL18P55774 89 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 NPC2P61916 151 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 KIAA0087Q14695 138 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 KRTAP26-1Q6PEX3 210 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 LINC00308Q8TCZ7 52 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 PPDPFQ9H3Y8 114 aa4.92□□□□□ -1.62
SMARCD1-210ENST00000551352 C16orf90A8MZG2 172 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 TSPAN13O95857 204 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 UBE2V1Q13404 147 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 CFAP161Q6P656 301 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 SOSTDC1Q6X4U4 206 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 C6orf223Q8N319 242 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 COPS9Q8WXC6 57 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 UPK3BQ9BT76 320 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 PGPEP1Q9NXJ5 209 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 PRO1854Q9UHT4 67 aa4.91□□□□□ -1.62
SMARCD1-210ENST00000551352 PKHD1L1Q86WI1 4243 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms