RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 SPATA25Q9BR10 227 aa11.36□□□□□ -0.59
CHFR-224ENST00000545046 TRBV30A0A0K0K1B3 111 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 IBA57-AS1B1ANH7 110 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 PCP4P48539 62 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 SOSTDC1Q6X4U4 206 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 DEFB131BA0A096LNP1 70 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 MALP21145 153 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 KLK12Q9UKR0 248 aa11.35□□□□□ -0.59
CHFR-224ENST00000545046 WFDC2Q14508 124 aa11.34□□□□□ -0.59
CHFR-224ENST00000545046 DEFB121Q5J5C9 76 aa11.34□□□□□ -0.59
CHFR-224ENST00000545046 MIR7-3HGQ8N6C7 128 aa11.34□□□□□ -0.59
CHFR-224ENST00000545046 K7ERU9 68 aa11.34□□□□□ -0.59
CHFR-224ENST00000545046 RPL13AP40429 203 aaKnown RBP11.34□□□□□ -0.59
CHFR-224ENST00000545046 PRO0461Q9UI25 63 aa11.33□□□□□ -0.6
CHFR-224ENST00000545046 K7EIL1 84 aa11.33□□□□□ -0.6
CHFR-224ENST00000545046 CFAP161Q6P656 301 aa11.33□□□□□ -0.6
CHFR-224ENST00000545046 PRR34Q9NV39 138 aa11.33□□□□□ -0.6
CHFR-224ENST00000545046 TRIAP1O43715 76 aa11.32□□□□□ -0.6
CHFR-224ENST00000545046 COX6CP09669 75 aa11.32□□□□□ -0.6
CHFR-224ENST00000545046 CKS1BP61024 79 aa11.32□□□□□ -0.6
CHFR-224ENST00000545046 MTURNQ8N3F0 131 aa11.32□□□□□ -0.6
CHFR-224ENST00000545046 ANK2Q01484 3957 aa11.32□□□□□ -0.6
CHFR-224ENST00000545046 PFN2P35080 140 aa11.31□□□□□ -0.6
CHFR-224ENST00000545046 FOXI1Q12951 378 aa11.31□□□□□ -0.6
CHFR-224ENST00000545046 GAGE12HA6NDE8 117 aa11.31□□□□□ -0.6
CHFR-224ENST00000545046 CRPP02741 224 aa11.31□□□□□ -0.6
CHFR-224ENST00000545046 TM2D3Q9BRN9 247 aa11.31□□□□□ -0.6
CHFR-224ENST00000545046 ENHOQ6UWT2 76 aa11.3□□□□□ -0.6
CHFR-224ENST00000545046 MRAPQ8TCY5 172 aa11.3□□□□□ -0.6
CHFR-224ENST00000545046 CXCL5P42830 114 aa11.3□□□□□ -0.6
CHFR-224ENST00000545046 WFDC10BQ8IUB3 73 aa11.3□□□□□ -0.6
CHFR-224ENST00000545046 KIAA0087Q14695 138 aa11.29□□□□□ -0.6
CHFR-224ENST00000545046 ATXN8Q156A1 80 aa11.29□□□□□ -0.6
CHFR-224ENST00000545046 C2orf82Q6UX34 121 aa11.29□□□□□ -0.6
CHFR-224ENST00000545046 TRAV8-4A0A0B4J246 113 aa11.28□□□□□ -0.6
CHFR-224ENST00000545046 ESRGQ1W209 222 aa11.28□□□□□ -0.6
CHFR-224ENST00000545046 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
CHFR-224ENST00000545046 UBE2WQ96B02 151 aa11.28□□□□□ -0.6
CHFR-224ENST00000545046 SND1-IT1Q9HBX3 110 aa11.28□□□□□ -0.6
CHFR-224ENST00000545046 TENM3Q9P273 2699 aa11.27□□□□□ -0.6
CHFR-224ENST00000545046 ETDBQ3ZM63 59 aa11.27□□□□□ -0.6
CHFR-224ENST00000545046 KLK5Q9Y337 293 aaPredicted RBP11.27□□□□□ -0.6
CHFR-224ENST00000545046 NOTCH1P46531 2555 aa11.27□□□□□ -0.61
CHFR-224ENST00000545046 TRAV10A0A0B4J240 114 aa11.27□□□□□ -0.61
CHFR-224ENST00000545046 TRAV13-2A0A0B4J235 113 aa11.26□□□□□ -0.61
CHFR-224ENST00000545046 CCL18P55774 89 aa11.26□□□□□ -0.61
CHFR-224ENST00000545046 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
CHFR-224ENST00000545046 COX17Q14061 63 aa11.24□□□□□ -0.61
CHFR-224ENST00000545046 VPS25Q9BRG1 176 aa11.24□□□□□ -0.61
CHFR-224ENST00000545046 C9JAW5 83 aa11.24□□□□□ -0.61
CHFR-224ENST00000545046 SPAG11BQ08648 103 aa11.23□□□□□ -0.61
CHFR-224ENST00000545046 C21orf62-AS1Q17RA5 79 aa11.23□□□□□ -0.61
CHFR-224ENST00000545046 C15orf53Q8NAA6 179 aa11.23□□□□□ -0.61
CHFR-224ENST00000545046 MDFIQ99750 246 aa11.23□□□□□ -0.61
CHFR-224ENST00000545046 LINC01620Q4KN68 170 aa11.23□□□□□ -0.61
CHFR-224ENST00000545046 J3QR89 54 aa11.21□□□□□ -0.61
CHFR-224ENST00000545046 SLC25A20O43772 301 aa11.21□□□□□ -0.61
CHFR-224ENST00000545046 IGKV2-28A0A075B6P5 120 aa11.21□□□□□ -0.62
CHFR-224ENST00000545046 IGKV2D-28P01615 120 aa11.21□□□□□ -0.62
CHFR-224ENST00000545046 CLEC2BQ92478 149 aa11.21□□□□□ -0.62
CHFR-224ENST00000545046 NBEAL1Q6ZS30 2694 aa11.21□□□□□ -0.62
CHFR-224ENST00000545046 LINC01556Q5JQF7 62 aa11.2□□□□□ -0.62
CHFR-224ENST00000545046 LINC00337Q8N6G1 96 aa11.2□□□□□ -0.62
CHFR-224ENST00000545046 LST1O00453 97 aa11.19□□□□□ -0.62
CHFR-224ENST00000545046 C6orf223Q8N319 242 aa11.19□□□□□ -0.62
CHFR-224ENST00000545046 M0QXV9 152 aa11.18□□□□□ -0.62
CHFR-224ENST00000545046 C9orf116Q5BN46 136 aaPredicted RBP11.18□□□□□ -0.62
CHFR-224ENST00000545046 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
CHFR-224ENST00000545046 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
CHFR-224ENST00000545046 TEN1Q86WV5 123 aa11.17□□□□□ -0.62
CHFR-224ENST00000545046 RPL28P46779 137 aaKnown RBP11.17□□□□□ -0.62
CHFR-224ENST00000545046 ANKRD29Q8N6D5 301 aa11.17□□□□□ -0.62
CHFR-224ENST00000545046 LINC00526Q96FQ7 95 aa11.17□□□□□ -0.62
CHFR-224ENST00000545046 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
CHFR-224ENST00000545046 OR13C6PQ8NH95 151 aa11.16□□□□□ -0.62
CHFR-224ENST00000545046 MUC7Q8TAX7 377 aa11.16□□□□□ -0.62
CHFR-224ENST00000545046 C1orf43Q9BWL3 253 aa11.16□□□□□ -0.62
CHFR-224ENST00000545046 KRTAP26-1Q6PEX3 210 aa11.15□□□□□ -0.62
CHFR-224ENST00000545046 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.62
CHFR-224ENST00000545046 DNAH10OSP0CZ25 163 aa11.14□□□□□ -0.63
CHFR-224ENST00000545046 ZNF561-AS1K7EIQ3 104 aa11.14□□□□□ -0.63
CHFR-224ENST00000545046 NDUFC2O95298 119 aa11.14□□□□□ -0.63
CHFR-224ENST00000545046 PPDPFLQ8WWR9 84 aa11.14□□□□□ -0.63
CHFR-224ENST00000545046 LINC01600Q96MT4 127 aa11.13□□□□□ -0.63
CHFR-224ENST00000545046 GVQW2A0A096LPI5 108 aaPredicted RBP11.13□□□□□ -0.63
CHFR-224ENST00000545046 SMIM11BQ8TCY0 68 aa11.13□□□□□ -0.63
CHFR-224ENST00000545046 LINC00588Q9Y4M8 146 aa11.13□□□□□ -0.63
CHFR-224ENST00000545046 IGKV2D-24A0A075B6R9 120 aa11.12□□□□□ -0.63
CHFR-224ENST00000545046 H3BT86 120 aa11.12□□□□□ -0.63
CHFR-224ENST00000545046 MGAM2Q2M2H8 2515 aa11.11□□□□□ -0.63
CHFR-224ENST00000545046 HIGD2BQ4VC39 106 aa11.1□□□□□ -0.63
CHFR-224ENST00000545046 CARD19Q96LW7 228 aa11.1□□□□□ -0.63
CHFR-224ENST00000545046 CAMK2N2Q96S95 79 aa11.1□□□□□ -0.63
CHFR-224ENST00000545046 HUWE1Q7Z6Z7 4374 aaKnown RBP11.09□□□□□ -0.63
CHFR-224ENST00000545046 TRACP01848 142 aa11.09□□□□□ -0.63
CHFR-224ENST00000545046 C6orf48Q9UBA6 75 aa11.09□□□□□ -0.63
CHFR-224ENST00000545046 H0YGX0 51 aa11.09□□□□□ -0.63
CHFR-224ENST00000545046 Q9HAA7 133 aa11.09□□□□□ -0.63
CHFR-224ENST00000545046 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
CHFR-224ENST00000545046 C15orf56Q8N910 161 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms