RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 PRR4Q16378 134 aa14.38□□□□□ -0.11
LEMD3-203ENST00000541171 C2orf88Q9BSF0 95 aa14.38□□□□□ -0.11
LEMD3-203ENST00000541171 TOMM7Q9P0U1 55 aa14.38□□□□□ -0.11
LEMD3-203ENST00000541171 PRSS2P07478 247 aa14.37□□□□□ -0.11
LEMD3-203ENST00000541171 LINC00469Q8N7U9 141 aa14.37□□□□□ -0.11
LEMD3-203ENST00000541171 ALKBH7Q9BT30 221 aaPredicted RBP14.37□□□□□ -0.11
LEMD3-203ENST00000541171 MRPL18Q9H0U6 180 aaKnown RBP14.37□□□□□ -0.11
LEMD3-203ENST00000541171 NPSP0C0P6 89 aa14.36□□□□□ -0.11
LEMD3-203ENST00000541171 G0S2P27469 103 aa14.36□□□□□ -0.11
LEMD3-203ENST00000541171 C2orf66Q6UXQ4 117 aa14.36□□□□□ -0.11
LEMD3-203ENST00000541171 LINC01561Q8N1V8 128 aa14.36□□□□□ -0.11
LEMD3-203ENST00000541171 RPL13AP40429 203 aaKnown RBP14.35□□□□□ -0.11
LEMD3-203ENST00000541171 CKS1BP61024 79 aa14.35□□□□□ -0.11
LEMD3-203ENST00000541171 Q6ZN92 141 aa14.35□□□□□ -0.11
LEMD3-203ENST00000541171 VCX2Q9H322 139 aa14.35□□□□□ -0.11
LEMD3-203ENST00000541171 FABP9Q0Z7S8 132 aa14.34□□□□□ -0.11
LEMD3-203ENST00000541171 LINC00173Q6ZV60 143 aa14.34□□□□□ -0.11
LEMD3-203ENST00000541171 C6orf226Q5I0X4 101 aa14.33□□□□□ -0.12
LEMD3-203ENST00000541171 LINC01546A6NGU7 62 aa14.32□□□□□ -0.12
LEMD3-203ENST00000541171 XAGE1AQ9HD64 81 aa14.32□□□□□ -0.12
LEMD3-203ENST00000541171 C22orf24Q9Y442 160 aa14.32□□□□□ -0.12
LEMD3-203ENST00000541171 ZNF861PO60384 105 aa14.31□□□□□ -0.12
LEMD3-203ENST00000541171 AMELXQ99217 191 aa14.31□□□□□ -0.12
LEMD3-203ENST00000541171 YPEL4Q96NS1 127 aa14.3□□□□□ -0.12
LEMD3-203ENST00000541171 TRAPPC1Q9Y5R8 145 aa14.3□□□□□ -0.12
LEMD3-203ENST00000541171 LINC01549A6NIU2 74 aa14.29□□□□□ -0.12
LEMD3-203ENST00000541171 IGIPA6NJ69 53 aa14.29□□□□□ -0.12
LEMD3-203ENST00000541171 TOMM6Q96B49 74 aa14.29□□□□□ -0.12
LEMD3-203ENST00000541171 TIMM17AQ99595 171 aa14.29□□□□□ -0.12
LEMD3-203ENST00000541171 PAPPA-AS1Q5QFB9 102 aa14.28□□□□□ -0.12
LEMD3-203ENST00000541171 Q8IZM0 81 aa14.28□□□□□ -0.12
LEMD3-203ENST00000541171 NUPR1O60356 82 aa14.27□□□□□ -0.13
LEMD3-203ENST00000541171 LBHQ53QV2 105 aaPredicted RBP14.27□□□□□ -0.13
LEMD3-203ENST00000541171 SLC7A5P1Q8MH63 180 aa14.27□□□□□ -0.13
LEMD3-203ENST00000541171 TSPAN13O95857 204 aa14.26□□□□□ -0.13
LEMD3-203ENST00000541171 FA2HQ7L5A8 372 aa14.26□□□□□ -0.13
LEMD3-203ENST00000541171 SMCO4Q9NRQ5 59 aa14.25□□□□□ -0.13
LEMD3-203ENST00000541171 CDKN2A-AS1Q9UH64 79 aa14.25□□□□□ -0.13
LEMD3-203ENST00000541171 FAM19A3Q7Z5A8 133 aa14.24□□□□□ -0.13
LEMD3-203ENST00000541171 HERVK_113P63121 156 aa14.23□□□□□ -0.13
LEMD3-203ENST00000541171 ERASQ7Z444 233 aa14.23□□□□□ -0.13
LEMD3-203ENST00000541171 C18orf32Q8TCD1 76 aa14.23□□□□□ -0.13
LEMD3-203ENST00000541171 GEMIN7Q9H840 131 aaKnown RBP14.23□□□□□ -0.13
LEMD3-203ENST00000541171 MUC2Q02817 5179 aa14.22□□□□□ -0.13
LEMD3-203ENST00000541171 F8VRH5 84 aa14.22□□□□□ -0.13
LEMD3-203ENST00000541171 CBLN2Q8IUK8 224 aa14.22□□□□□ -0.13
LEMD3-203ENST00000541171 SEC11AP67812 179 aa14.21□□□□□ -0.13
LEMD3-203ENST00000541171 MRPL55Q7Z7F7 128 aaKnown RBP14.21□□□□□ -0.13
LEMD3-203ENST00000541171 SCGB3A1Q96QR1 104 aa14.21□□□□□ -0.13
LEMD3-203ENST00000541171 RPL28P46779 137 aaKnown RBP14.19□□□□□ -0.14
LEMD3-203ENST00000541171 BCE1O60756 84 aa14.18□□□□□ -0.14
LEMD3-203ENST00000541171 TP73-AS1Q9UF72 201 aa14.18□□□□□ -0.14
LEMD3-203ENST00000541171 A0A087X002 238 aa14.17□□□□□ -0.14
LEMD3-203ENST00000541171 RPL37AP8A6NKH3 93 aa14.17□□□□□ -0.14
LEMD3-203ENST00000541171 LINC00614P0C842 121 aa14.17□□□□□ -0.14
LEMD3-203ENST00000541171 RAB5BP61020 215 aa14.17□□□□□ -0.14
LEMD3-203ENST00000541171 URB1-AS1Q96HZ7 61 aa14.16□□□□□ -0.14
LEMD3-203ENST00000541171 LINC00167Q96N53 147 aa14.16□□□□□ -0.14
LEMD3-203ENST00000541171 GAGE10A6NGK3 116 aa14.15□□□□□ -0.14
LEMD3-203ENST00000541171 CXCL5P42830 114 aa14.15□□□□□ -0.14
LEMD3-203ENST00000541171 TYMSOSQ8TAI1 123 aa14.15□□□□□ -0.14
LEMD3-203ENST00000541171 CRYGAP11844 174 aa14.14□□□□□ -0.15
LEMD3-203ENST00000541171 A0A096LNJ9 63 aa14.13□□□□□ -0.15
LEMD3-203ENST00000541171 HBDP02042 147 aa14.13□□□□□ -0.15
LEMD3-203ENST00000541171 ANAPC11Q9NYG5 84 aa14.13□□□□□ -0.15
LEMD3-203ENST00000541171 SMIM1B2RUZ4 78 aa14.12□□□□□ -0.15
LEMD3-203ENST00000541171 COX7B2Q8TF08 81 aa14.12□□□□□ -0.15
LEMD3-203ENST00000541171 PMVKQ15126 192 aa14.1□□□□□ -0.15
LEMD3-203ENST00000541171 PDZD11Q5EBL8 140 aa14.1□□□□□ -0.15
LEMD3-203ENST00000541171 CHCHD1Q96BP2 118 aaKnown RBP14.09□□□□□ -0.15
LEMD3-203ENST00000541171 CST9LQ9H4G1 147 aa14.09□□□□□ -0.15
LEMD3-203ENST00000541171 A0A0U1RQV1 116 aa14.08□□□□□ -0.16
LEMD3-203ENST00000541171 TINCRA0A1B0GVN0 87 aa14.08□□□□□ -0.16
LEMD3-203ENST00000541171 IGLV5-45A0A087WSX0 123 aa14.07□□□□□ -0.16
LEMD3-203ENST00000541171 SPINK8P0C7L1 97 aa14.07□□□□□ -0.16
LEMD3-203ENST00000541171 UBE2AP49459 152 aa14.07□□□□□ -0.16
LEMD3-203ENST00000541171 ATP5LO75964 103 aa14.06□□□□□ -0.16
LEMD3-203ENST00000541171 NKAPP1Q8N9T2 125 aa14.06□□□□□ -0.16
LEMD3-203ENST00000541171 TRGC2P03986 189 aa14.05□□□□□ -0.16
LEMD3-203ENST00000541171 PMCHL1Q16048 86 aa14.05□□□□□ -0.16
LEMD3-203ENST00000541171 COLCA2A8K830 154 aa14.04□□□□□ -0.16
LEMD3-203ENST00000541171 KRTAP13-2Q52LG2 175 aa14.04□□□□□ -0.16
LEMD3-203ENST00000541171 IGLV5-37A0A075B6J1 123 aa14.03□□□□□ -0.16
LEMD3-203ENST00000541171 SCO1O75880 301 aa14.03□□□□□ -0.16
LEMD3-203ENST00000541171 RETNLBQ9BQ08 111 aa14.02□□□□□ -0.17
LEMD3-203ENST00000541171 IGKV2-28A0A075B6P5 120 aa14.01□□□□□ -0.17
LEMD3-203ENST00000541171 IGKV2D-28P01615 120 aa14.01□□□□□ -0.17
LEMD3-203ENST00000541171 IGLC3P0DOY3 106 aa14.01□□□□□ -0.17
LEMD3-203ENST00000541171 KRTAP13-1Q8IUC0 172 aa14.01□□□□□ -0.17
LEMD3-203ENST00000541171 BAGE3Q86Y29 109 aa14□□□□□ -0.17
LEMD3-203ENST00000541171 HSBP1O75506 76 aa13.98□□□□□ -0.17
LEMD3-203ENST00000541171 PFN2P35080 140 aa13.98□□□□□ -0.17
LEMD3-203ENST00000541171 H3BRM9 83 aa13.97□□□□□ -0.17
LEMD3-203ENST00000541171 NDUFA6P56556 154 aa13.97□□□□□ -0.17
LEMD3-203ENST00000541171 LINC00304Q8N9R0 145 aa13.97□□□□□ -0.17
LEMD3-203ENST00000541171 FAM229BQ4G0N7 80 aa13.96□□□□□ -0.17
LEMD3-203ENST00000541171 PRLHP81277 87 aa13.95□□□□□ -0.18
LEMD3-203ENST00000541171 IGKV2D-26A0A0A0MRZ7 120 aa13.94□□□□□ -0.18
LEMD3-203ENST00000541171 FAM19A1Q7Z5A9 133 aa13.94□□□□□ -0.18
LEMD3-203ENST00000541171 IFI27L1Q96BM0 104 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms