RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 UNC79Q9P2D8 2635 aa7.23□□□□□ -1.25
CDC42SE1-207ENST00000540998 RNASE1P07998 156 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-207ENST00000540998 PDZD2O15018 2839 aa7.23□□□□□ -1.25
CDC42SE1-207ENST00000540998 ANK3Q12955 4377 aaKnown RBP7.23□□□□□ -1.25
CDC42SE1-207ENST00000540998 IGLV10-54A0A075B6I4 117 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 TRAV13-2A0A0B4J235 113 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 DEFB4AO15263 64 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 C9orf116Q5BN46 136 aaPredicted RBP7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 FAM19A3Q7Z5A8 133 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 TEP1Q99973 2627 aaKnown RBP7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 ATRQ13535 2644 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 TRBV6-8A0A0A6YYG3 113 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 LRRC75A-AS1Q8N1F1 130 aa7.22□□□□□ -1.25
CDC42SE1-207ENST00000540998 LINC00526Q96FQ7 95 aa7.21□□□□□ -1.25
CDC42SE1-207ENST00000540998 HECTD1Q9ULT8 2610 aa7.21□□□□□ -1.26
CDC42SE1-207ENST00000540998 HIVEP1P15822 2718 aa7.21□□□□□ -1.26
CDC42SE1-207ENST00000540998 FHL2Q14192 279 aa7.21□□□□□ -1.26
CDC42SE1-207ENST00000540998 ACYP1P07311 99 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 C6orf226Q5I0X4 101 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 hADV29S1A0JD25 119 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 DEFB113Q30KQ7 82 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 FAM110AQ9BQ89 295 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 CXCL5P42830 114 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 KRTAP1-3Q8IUG1 177 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 C3orf22Q8N5N4 141 aa7.2□□□□□ -1.26
CDC42SE1-207ENST00000540998 LINC00959A0A1B0GUT2 108 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 HILS1P60008 231 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 COPS9Q8WXC6 57 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 OTOGQ6ZRI0 2925 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 SS18Q15532 418 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 Q8NDZ9 215 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 C19orf73Q9NVV2 129 aa7.19□□□□□ -1.26
CDC42SE1-207ENST00000540998 INAFM2P0DMQ5 153 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 GYPEP15421 78 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 FAM222AQ5U5X8 452 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 CSNK1G2-AS1Q8NCQ2 148 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 SPATA3Q8NHX4 192 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 C16orf74Q96GX8 76 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 A0A087WZ39 114 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 CFAP161Q6P656 301 aa7.18□□□□□ -1.26
CDC42SE1-207ENST00000540998 TRBV6-4A0A1B0GX49 114 aa7.17□□□□□ -1.26
CDC42SE1-207ENST00000540998 C2orf48Q96LS8 159 aa7.17□□□□□ -1.26
CDC42SE1-207ENST00000540998 A0A1B0GX51 115 aa7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 HIST1H4AP62805 103 aaKnown RBP7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 LINC01006Q8NI28 216 aa7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 IMUPQ9GZP8 106 aa7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 NANOS2P60321 138 aaKnown RBP7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 LINC01561Q8N1V8 128 aa7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 KIR2DL5BQ8NHK3 375 aa7.16□□□□□ -1.26
CDC42SE1-207ENST00000540998 IBA57-AS1B1ANH7 110 aa7.15□□□□□ -1.26
CDC42SE1-207ENST00000540998 UQCRQO14949 82 aa7.15□□□□□ -1.26
CDC42SE1-207ENST00000540998 LINC00482Q8N8I6 264 aa7.15□□□□□ -1.26
CDC42SE1-207ENST00000540998 TRAV25A0A0B4J276 109 aa7.15□□□□□ -1.27
CDC42SE1-207ENST00000540998 LINC00269Q8N2A0 174 aa7.15□□□□□ -1.27
CDC42SE1-207ENST00000540998 PF4P02776 101 aa7.14□□□□□ -1.27
CDC42SE1-207ENST00000540998 COX7CP15954 63 aa7.14□□□□□ -1.27
CDC42SE1-207ENST00000540998 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
CDC42SE1-207ENST00000540998 FAM19A1Q7Z5A9 133 aa7.13□□□□□ -1.27
CDC42SE1-207ENST00000540998 M0R2N4 97 aa7.13□□□□□ -1.27
CDC42SE1-207ENST00000540998 IGLV1-51P01701 117 aa7.13□□□□□ -1.27
CDC42SE1-207ENST00000540998 OVOL2Q9BRP0 275 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 TMEM126AQ9H061 195 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 TRAV23DV6A0A075B6W5 121 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 ORMDL1Q9P0S3 153 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 H0YGX0 51 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 RPL18AQ02543 176 aaKnown RBP7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 C10orf25Q5T742 122 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 SMR3AQ99954 134 aa7.12□□□□□ -1.27
CDC42SE1-207ENST00000540998 C6orf99Q4VX62 202 aa7.11□□□□□ -1.27
CDC42SE1-207ENST00000540998 OBSCN-AS1Q96MR7 158 aa7.11□□□□□ -1.27
CDC42SE1-207ENST00000540998 USP17L23D6RBM5 183 aa7.11□□□□□ -1.27
CDC42SE1-207ENST00000540998 DSCR8Q96T75 97 aa7.11□□□□□ -1.27
CDC42SE1-207ENST00000540998 ANGP03950 147 aaKnown RBP7.1□□□□□ -1.27
CDC42SE1-207ENST00000540998 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
CDC42SE1-207ENST00000540998 ZNF843Q8N446 348 aa7.1□□□□□ -1.27
CDC42SE1-207ENST00000540998 HTN3P15516 51 aa7.1□□□□□ -1.27
CDC42SE1-207ENST00000540998 Q8N814 137 aa7.1□□□□□ -1.27
CDC42SE1-207ENST00000540998 ATOX1O00244 68 aa7.09□□□□□ -1.27
CDC42SE1-207ENST00000540998 LY6G6DO95868 133 aa7.09□□□□□ -1.27
CDC42SE1-207ENST00000540998 DEFB135Q30KP9 77 aa7.09□□□□□ -1.27
CDC42SE1-207ENST00000540998 TMEM86BQ8N661 226 aa7.09□□□□□ -1.27
CDC42SE1-207ENST00000540998 CHCHD10Q8WYQ3 142 aaPredicted RBP7.09□□□□□ -1.27
CDC42SE1-207ENST00000540998 KRTAP10-3P60369 221 aa7.08□□□□□ -1.28
CDC42SE1-207ENST00000540998 KIAA0087Q14695 138 aa7.08□□□□□ -1.28
CDC42SE1-207ENST00000540998 Q6JHZ5 121 aa7.08□□□□□ -1.28
CDC42SE1-207ENST00000540998 UNQ6190/PRO20217Q6UXQ8 127 aa7.08□□□□□ -1.28
CDC42SE1-207ENST00000540998 OXTP01178 125 aa7.08□□□□□ -1.28
CDC42SE1-207ENST00000540998 X6R8D5 127 aa7.08□□□□□ -1.28
CDC42SE1-207ENST00000540998 TENM3Q9P273 2699 aa7.07□□□□□ -1.28
CDC42SE1-207ENST00000540998 CCKP06307 115 aa7.07□□□□□ -1.28
CDC42SE1-207ENST00000540998 FAM19A5Q7Z5A7 132 aaPredicted RBP7.07□□□□□ -1.28
CDC42SE1-207ENST00000540998 Q8IZM0 81 aa7.07□□□□□ -1.28
CDC42SE1-207ENST00000540998 F8P00451 2351 aa7.07□□□□□ -1.28
CDC42SE1-207ENST00000540998 CRYGAP11844 174 aa7.06□□□□□ -1.28
CDC42SE1-207ENST00000540998 KRTAP1-1Q07627 177 aa7.06□□□□□ -1.28
CDC42SE1-207ENST00000540998 BAHCC1Q9P281 2608 aa7.06□□□□□ -1.28
CDC42SE1-207ENST00000540998 XAGE1AQ9HD64 81 aa7.06□□□□□ -1.28
CDC42SE1-207ENST00000540998 REG3AQ06141 175 aa7.06□□□□□ -1.28
CDC42SE1-207ENST00000540998 UPK3BQ9BT76 320 aa7.06□□□□□ -1.28
CDC42SE1-207ENST00000540998 CELA1Q9UNI1 258 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms