RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 C15orf53Q8NAA6 179 aa8.24□□□□□ -1.09
AP003559.1-201ENST00000540906 PRSS2P07478 247 aa8.23□□□□□ -1.09
AP003559.1-201ENST00000540906 LINC01556Q5JQF7 62 aa8.23□□□□□ -1.09
AP003559.1-201ENST00000540906 MEIG1Q5JSS6 88 aa8.23□□□□□ -1.09
AP003559.1-201ENST00000540906 LINC01561Q8N1V8 128 aa8.23□□□□□ -1.09
AP003559.1-201ENST00000540906 LINC00526Q96FQ7 95 aa8.23□□□□□ -1.09
AP003559.1-201ENST00000540906 STARD9Q9P2P6 4700 aa8.22□□□□□ -1.09
AP003559.1-201ENST00000540906 CRPP02741 224 aa8.22□□□□□ -1.09
AP003559.1-201ENST00000540906 Q8IZM0 81 aa8.22□□□□□ -1.09
AP003559.1-201ENST00000540906 C6orf223Q8N319 242 aa8.22□□□□□ -1.09
AP003559.1-201ENST00000540906 DNAH10OSP0CZ25 163 aa8.21□□□□□ -1.1
AP003559.1-201ENST00000540906 HERV-K104P63124 156 aa8.21□□□□□ -1.1
AP003559.1-201ENST00000540906 VAMP3Q15836 100 aa8.21□□□□□ -1.1
AP003559.1-201ENST00000540906 LINC00308Q8TCZ7 52 aa8.21□□□□□ -1.1
AP003559.1-201ENST00000540906 TMEM238LA0A1B0GVL6 79 aa8.2□□□□□ -1.1
AP003559.1-201ENST00000540906 A6NJY4 79 aa8.2□□□□□ -1.1
AP003559.1-201ENST00000540906 TSPAN13O95857 204 aa8.2□□□□□ -1.1
AP003559.1-201ENST00000540906 MALP21145 153 aa8.2□□□□□ -1.1
AP003559.1-201ENST00000540906 C6orf226Q5I0X4 101 aa8.2□□□□□ -1.1
AP003559.1-201ENST00000540906 A0A1W2PPM0 123 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 C10orf25Q5T742 122 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 PGPEP1Q9NXJ5 209 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 APLNQ9ULZ1 77 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 TGP01266 2768 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 PFN2P35080 140 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 RPL24P83731 157 aaKnown RBP8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 SFTA2Q6UW10 78 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 MIR7-3HGQ8N6C7 128 aa8.19□□□□□ -1.1
AP003559.1-201ENST00000540906 TRAV8-4A0A0B4J246 113 aa8.18□□□□□ -1.1
AP003559.1-201ENST00000540906 NHLRC4P0CG21 123 aaPredicted RBP8.18□□□□□ -1.1
AP003559.1-201ENST00000540906 CIRBPQ14011 172 aaKnown RBP8.18□□□□□ -1.1
AP003559.1-201ENST00000540906 C9orf116Q5BN46 136 aaPredicted RBP8.18□□□□□ -1.1
AP003559.1-201ENST00000540906 Q9HAA7 133 aa8.18□□□□□ -1.1
AP003559.1-201ENST00000540906 KLK5Q9Y337 293 aaPredicted RBP8.18□□□□□ -1.1
AP003559.1-201ENST00000540906 CCL18P55774 89 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 SPAG11BQ08648 103 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 UNQ6190/PRO20217Q6UXQ8 127 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 ERG28Q9UKR5 140 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 A0A0B4J2C4 111 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 IFITM1P13164 125 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 LINC00158P58513 81 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 UBE2V1Q13404 147 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 CASC10Q5T4H9 136 aa8.17□□□□□ -1.1
AP003559.1-201ENST00000540906 IBA57-AS1B1ANH7 110 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 HIGD2BQ4VC39 106 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 C15orf56Q8N910 161 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 UPK3BQ9BT76 320 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 PRO1854Q9UHT4 67 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 DNAH10Q8IVF4 4471 aa8.16□□□□□ -1.1
AP003559.1-201ENST00000540906 IGKV2D-24A0A075B6R9 120 aa8.15□□□□□ -1.1
AP003559.1-201ENST00000540906 H7C2G1 150 aa8.15□□□□□ -1.1
AP003559.1-201ENST00000540906 CFAP161Q6P656 301 aa8.15□□□□□ -1.1
AP003559.1-201ENST00000540906 K7EP34 96 aa8.15□□□□□ -1.11
AP003559.1-201ENST00000540906 CKS1BP61024 79 aa8.15□□□□□ -1.11
AP003559.1-201ENST00000540906 SPCS1Q9Y6A9 102 aa8.15□□□□□ -1.11
AP003559.1-201ENST00000540906 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
AP003559.1-201ENST00000540906 FABP2P12104 132 aa8.14□□□□□ -1.11
AP003559.1-201ENST00000540906 C1orf43Q9BWL3 253 aa8.14□□□□□ -1.11
AP003559.1-201ENST00000540906 VPS13DQ5THJ4 4388 aa8.13□□□□□ -1.11
AP003559.1-201ENST00000540906 GAGE10A6NGK3 116 aa8.13□□□□□ -1.11
AP003559.1-201ENST00000540906 NTN5Q8WTR8 489 aaPredicted RBP8.13□□□□□ -1.11
AP003559.1-201ENST00000540906 IGKV2-28A0A075B6P5 120 aa8.12□□□□□ -1.11
AP003559.1-201ENST00000540906 IGKV2D-28P01615 120 aa8.12□□□□□ -1.11
AP003559.1-201ENST00000540906 CXCL5P42830 114 aa8.12□□□□□ -1.11
AP003559.1-201ENST00000540906 Q8NDZ9 215 aa8.12□□□□□ -1.11
AP003559.1-201ENST00000540906 C6orf48Q9UBA6 75 aa8.12□□□□□ -1.11
AP003559.1-201ENST00000540906 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
AP003559.1-201ENST00000540906 TENM2Q9NT68 2774 aa8.1□□□□□ -1.11
AP003559.1-201ENST00000540906 LOC107984156A0A0G2JMH3 177 aa8.1□□□□□ -1.11
AP003559.1-201ENST00000540906 ARL17AQ8IVW1 177 aa8.1□□□□□ -1.11
AP003559.1-201ENST00000540906 SND1-IT1Q9HBX3 110 aa8.1□□□□□ -1.11
AP003559.1-201ENST00000540906 TRIAP1O43715 76 aa8.09□□□□□ -1.11
AP003559.1-201ENST00000540906 LINC00337Q8N6G1 96 aa8.09□□□□□ -1.11
AP003559.1-201ENST00000540906 PPDPFQ9H3Y8 114 aa8.09□□□□□ -1.11
AP003559.1-201ENST00000540906 NUPR2A6NF83 97 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 PRR3P79522 188 aaKnown RBP8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 Q1RN00 199 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 Q6ZRU5 148 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 UBE2DNLQ8IWF7 75 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 H3BMG7 143 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 TCL1BO95988 128 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 MTURNQ8N3F0 131 aa8.08□□□□□ -1.12
AP003559.1-201ENST00000540906 GVQW2A0A096LPI5 108 aaPredicted RBP8.07□□□□□ -1.12
AP003559.1-201ENST00000540906 ZNF561-AS1K7EIQ3 104 aa8.07□□□□□ -1.12
AP003559.1-201ENST00000540906 LECT2O14960 151 aa8.07□□□□□ -1.12
AP003559.1-201ENST00000540906 WFDC2Q14508 124 aa8.07□□□□□ -1.12
AP003559.1-201ENST00000540906 GTF2H5Q6ZYL4 71 aa8.07□□□□□ -1.12
AP003559.1-201ENST00000540906 CAMK2N2Q96S95 79 aa8.07□□□□□ -1.12
AP003559.1-201ENST00000540906 SLPIP03973 132 aa8.06□□□□□ -1.12
AP003559.1-201ENST00000540906 PSMB2P49721 201 aa8.06□□□□□ -1.12
AP003559.1-201ENST00000540906 COX17Q14061 63 aa8.06□□□□□ -1.12
AP003559.1-201ENST00000540906 USP17L23D6RBM5 183 aa8.06□□□□□ -1.12
AP003559.1-201ENST00000540906 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
AP003559.1-201ENST00000540906 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
AP003559.1-201ENST00000540906 C2orf48Q96LS8 159 aa8.04□□□□□ -1.12
AP003559.1-201ENST00000540906 PRO0461Q9UI25 63 aa8.04□□□□□ -1.12
AP003559.1-201ENST00000540906 TRBV30A0A0K0K1B3 111 aa8.03□□□□□ -1.12
AP003559.1-201ENST00000540906 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
AP003559.1-201ENST00000540906 WWC2-AS2Q96NR7 200 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms