RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SPART-AS1P0CW21 52 aa9.51□□□□□ -0.89
RTN3-210ENST00000540798 COPS9Q8WXC6 57 aa9.51□□□□□ -0.89
RTN3-210ENST00000540798 TRIAP1O43715 76 aa9.51□□□□□ -0.89
RTN3-210ENST00000540798 KRTAP10-11P60412 298 aa9.51□□□□□ -0.89
RTN3-210ENST00000540798 EGFEM1PQ0D2K5 195 aa9.51□□□□□ -0.89
RTN3-210ENST00000540798 SCGB1C2P0DMR2 95 aa9.5□□□□□ -0.89
RTN3-210ENST00000540798 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
RTN3-210ENST00000540798 LINC01561Q8N1V8 128 aa9.5□□□□□ -0.89
RTN3-210ENST00000540798 ICOSQ9Y6W8 199 aa9.5□□□□□ -0.89
RTN3-210ENST00000540798 H7C2G1 150 aa9.49□□□□□ -0.89
RTN3-210ENST00000540798 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
RTN3-210ENST00000540798 A0A096LPF7 62 aa9.49□□□□□ -0.89
RTN3-210ENST00000540798 Q1RN00 199 aa9.48□□□□□ -0.89
RTN3-210ENST00000540798 C9JAW5 83 aa9.48□□□□□ -0.89
RTN3-210ENST00000540798 OXLD1Q5BKU9 147 aa9.48□□□□□ -0.89
RTN3-210ENST00000540798 NTN5Q8WTR8 489 aaPredicted RBP9.48□□□□□ -0.89
RTN3-210ENST00000540798 SS18Q15532 418 aa9.47□□□□□ -0.89
RTN3-210ENST00000540798 RPL13AP40429 203 aaKnown RBP9.47□□□□□ -0.89
RTN3-210ENST00000540798 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
RTN3-210ENST00000540798 ATXN8Q156A1 80 aa9.47□□□□□ -0.89
RTN3-210ENST00000540798 ANK2Q01484 3957 aa9.46□□□□□ -0.89
RTN3-210ENST00000540798 C5orf38Q86SI9 138 aa9.46□□□□□ -0.89
RTN3-210ENST00000540798 A0A0U1RRA0 63 aa9.46□□□□□ -0.9
RTN3-210ENST00000540798 TMEM126AQ9H061 195 aa9.45□□□□□ -0.9
RTN3-210ENST00000540798 SLC25A20O43772 301 aa9.45□□□□□ -0.9
RTN3-210ENST00000540798 IBA57-AS1B1ANH7 110 aa9.45□□□□□ -0.9
RTN3-210ENST00000540798 C9orf153Q5TBE3 101 aa9.45□□□□□ -0.9
RTN3-210ENST00000540798 TOMM7Q9P0U1 55 aa9.45□□□□□ -0.9
RTN3-210ENST00000540798 FBN1P35555 2871 aaKnown RBP9.45□□□□□ -0.9
RTN3-210ENST00000540798 XCL1P47992 114 aa9.44□□□□□ -0.9
RTN3-210ENST00000540798 LELP1Q5T871 98 aa9.44□□□□□ -0.9
RTN3-210ENST00000540798 Q8IZM0 81 aa9.44□□□□□ -0.9
RTN3-210ENST00000540798 LINC01620Q4KN68 170 aa9.44□□□□□ -0.9
RTN3-210ENST00000540798 LINC00269Q8N2A0 174 aa9.43□□□□□ -0.9
RTN3-210ENST00000540798 CD164L2Q6UWJ8 174 aa9.43□□□□□ -0.9
RTN3-210ENST00000540798 COX6CP09669 75 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 C4orf26Q17RF5 130 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 Q8N3U1 123 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 MIR7-3HGQ8N6C7 128 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 TRAV8-4A0A0B4J246 113 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 FAM236AA0A1B0GUQ0 79 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 FAM236BA0A1B0GV22 79 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 CLPSL2Q6UWE3 100 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 HRCT1Q6UXD1 115 aa9.42□□□□□ -0.9
RTN3-210ENST00000540798 H3BNG1 76 aa9.41□□□□□ -0.9
RTN3-210ENST00000540798 LST1O00453 97 aa9.41□□□□□ -0.9
RTN3-210ENST00000540798 REG3AQ06141 175 aa9.41□□□□□ -0.9
RTN3-210ENST00000540798 C11orf68Q9H3H3 251 aaKnown RBP9.41□□□□□ -0.9
RTN3-210ENST00000540798 TRBV10-2A0A0K0K1G8 114 aa9.4□□□□□ -0.9
RTN3-210ENST00000540798 KIAA0087Q14695 138 aa9.4□□□□□ -0.9
RTN3-210ENST00000540798 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
RTN3-210ENST00000540798 RETNQ9HD89 108 aa9.4□□□□□ -0.9
RTN3-210ENST00000540798 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.91
RTN3-210ENST00000540798 HTN3P15516 51 aa9.4□□□□□ -0.91
RTN3-210ENST00000540798 IGKV2-28A0A075B6P5 120 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 J3KT08 172 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 IGKV2D-28P01615 120 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 Q6Q795 121 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 PRR34Q9NV39 138 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 C6orf226Q5I0X4 101 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 CLEC2BQ92478 149 aa9.39□□□□□ -0.91
RTN3-210ENST00000540798 COX7A2LO14548 114 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 CCL18P55774 89 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 LINC00158P58513 81 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 PKD1L1Q8TDX9 2849 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 LYPD5Q6UWN5 251 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 CYSTM1Q9H1C7 97 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 TRAV13-2A0A0B4J235 113 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 SND1-IT1Q9HBX3 110 aa9.38□□□□□ -0.91
RTN3-210ENST00000540798 COL6A5A8TX70 2615 aa9.37□□□□□ -0.91
RTN3-210ENST00000540798 LINC00337Q8N6G1 96 aa9.37□□□□□ -0.91
RTN3-210ENST00000540798 H3BT86 120 aa9.36□□□□□ -0.91
RTN3-210ENST00000540798 CXCL5P42830 114 aa9.36□□□□□ -0.91
RTN3-210ENST00000540798 RPL28P46779 137 aaKnown RBP9.36□□□□□ -0.91
RTN3-210ENST00000540798 OXTP01178 125 aa9.35□□□□□ -0.91
RTN3-210ENST00000540798 C2orf82Q6UX34 121 aa9.35□□□□□ -0.91
RTN3-210ENST00000540798 PFN2P35080 140 aa9.35□□□□□ -0.91
RTN3-210ENST00000540798 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
RTN3-210ENST00000540798 CRPP02741 224 aa9.34□□□□□ -0.91
RTN3-210ENST00000540798 COX17Q14061 63 aa9.34□□□□□ -0.91
RTN3-210ENST00000540798 ENHOQ6UWT2 76 aa9.34□□□□□ -0.91
RTN3-210ENST00000540798 OR13C6PQ8NH95 151 aa9.34□□□□□ -0.91
RTN3-210ENST00000540798 STAB1Q9NY15 2570 aa9.34□□□□□ -0.92
RTN3-210ENST00000540798 Q6ZTC4 211 aa9.34□□□□□ -0.92
RTN3-210ENST00000540798 KPRPQ5T749 579 aaPredicted RBP9.33□□□□□ -0.92
RTN3-210ENST00000540798 C3orf22Q8N5N4 141 aa9.33□□□□□ -0.92
RTN3-210ENST00000540798 DSCR8Q96T75 97 aa9.32□□□□□ -0.92
RTN3-210ENST00000540798 MALP21145 153 aa9.32□□□□□ -0.92
RTN3-210ENST00000540798 hADV29S1A0JD25 119 aa9.31□□□□□ -0.92
RTN3-210ENST00000540798 TRACP01848 142 aa9.31□□□□□ -0.92
RTN3-210ENST00000540798 KLK12Q9UKR0 248 aa9.31□□□□□ -0.92
RTN3-210ENST00000540798 UBE2WQ96B02 151 aa9.3□□□□□ -0.92
RTN3-210ENST00000540798 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
RTN3-210ENST00000540798 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
RTN3-210ENST00000540798 FAM218AQ96MZ4 157 aa9.29□□□□□ -0.92
RTN3-210ENST00000540798 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
RTN3-210ENST00000540798 GAGE2AQ6NT46 116 aa9.29□□□□□ -0.92
RTN3-210ENST00000540798 MDFIQ99750 246 aa9.29□□□□□ -0.92
RTN3-210ENST00000540798 PKIGQ9Y2B9 76 aa9.29□□□□□ -0.92
RTN3-210ENST00000540798 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms