RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 LINC00308Q8TCZ7 52 aa8.89□□□□□ -0.99
BDNF-218ENST00000533246 REV3LO60673 3130 aa8.89□□□□□ -0.99
BDNF-218ENST00000533246 H0YGX0 51 aa8.89□□□□□ -0.99
BDNF-218ENST00000533246 TRBV6-8A0A0A6YYG3 113 aa8.88□□□□□ -0.99
BDNF-218ENST00000533246 MYO15AQ9UKN7 3530 aa8.88□□□□□ -0.99
BDNF-218ENST00000533246 ATMQ13315 3056 aa8.88□□□□□ -0.99
BDNF-218ENST00000533246 LY6G6DO95868 133 aa8.88□□□□□ -0.99
BDNF-218ENST00000533246 REG3AQ06141 175 aa8.88□□□□□ -0.99
BDNF-218ENST00000533246 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
BDNF-218ENST00000533246 TACC2O95359 2948 aa8.87□□□□□ -0.99
BDNF-218ENST00000533246 LST1O00453 97 aa8.87□□□□□ -0.99
BDNF-218ENST00000533246 ZZEF1O43149 2961 aa8.87□□□□□ -0.99
BDNF-218ENST00000533246 TSPEAR-AS2P59090 65 aa8.87□□□□□ -0.99
BDNF-218ENST00000533246 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
BDNF-218ENST00000533246 UPK3BQ9BT76 320 aa8.86□□□□□ -0.99
BDNF-218ENST00000533246 KALRNO60229 2985 aa8.86□□□□□ -0.99
BDNF-218ENST00000533246 UBE2D4Q9Y2X8 147 aa8.86□□□□□ -0.99
BDNF-218ENST00000533246 UBE2BP63146 152 aa8.86□□□□□ -0.99
BDNF-218ENST00000533246 Q6ZSN1 163 aa8.85□□□□□ -0.99
BDNF-218ENST00000533246 SBSPONQ8IVN8 264 aa8.85□□□□□ -0.99
BDNF-218ENST00000533246 NDUFA1O15239 70 aa8.85□□□□□ -0.99
BDNF-218ENST00000533246 CCL18P55774 89 aa8.85□□□□□ -0.99
BDNF-218ENST00000533246 TRBV7-6A0A0J9YX20 115 aa8.85□□□□□ -0.99
BDNF-218ENST00000533246 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
BDNF-218ENST00000533246 IGLV2-18A0A075B6J9 118 aa8.84□□□□□ -0.99
BDNF-218ENST00000533246 COX8CQ7Z4L0 72 aa8.83□□□□□ -1
BDNF-218ENST00000533246 Q9UF83 564 aa8.83□□□□□ -1
BDNF-218ENST00000533246 SETXQ7Z333 2677 aaKnown RBP8.83□□□□□ -1
BDNF-218ENST00000533246 C1orf158Q8N1D5 194 aa8.83□□□□□ -1
BDNF-218ENST00000533246 ETDCA0A1B0GVM5 59 aa8.83□□□□□ -1
BDNF-218ENST00000533246 TRBV6-4A0A1B0GX49 114 aa8.83□□□□□ -1
BDNF-218ENST00000533246 FUSP35637 526 aaKnown RBP eCLIP8.83□□□□□ -1
BDNF-218ENST00000533246 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
BDNF-218ENST00000533246 MRPS36P82909 103 aaKnown RBP8.82□□□□□ -1
BDNF-218ENST00000533246 PSPHP1O15172 72 aa8.82□□□□□ -1
BDNF-218ENST00000533246 IGKV2-24A0A0C4DH68 120 aa8.82□□□□□ -1
BDNF-218ENST00000533246 LINC00242Q5T6M2 205 aa8.82□□□□□ -1
BDNF-218ENST00000533246 TEX15Q9BXT5 2789 aa8.82□□□□□ -1
BDNF-218ENST00000533246 COL12A1Q99715 3063 aa8.81□□□□□ -1
BDNF-218ENST00000533246 CD164Q04900 197 aa8.81□□□□□ -1
BDNF-218ENST00000533246 LINC00474Q9P2X8 69 aa8.8□□□□□ -1
BDNF-218ENST00000533246 HILS1P60008 231 aa8.8□□□□□ -1
BDNF-218ENST00000533246 COX6A2Q02221 97 aa8.8□□□□□ -1
BDNF-218ENST00000533246 C11orf45Q8TAV5 145 aa8.8□□□□□ -1
BDNF-218ENST00000533246 RMI2Q96E14 147 aa8.8□□□□□ -1
BDNF-218ENST00000533246 A0A087WZ39 114 aa8.79□□□□□ -1
BDNF-218ENST00000533246 FHL2Q14192 279 aa8.79□□□□□ -1
BDNF-218ENST00000533246 C6orf99Q4VX62 202 aa8.79□□□□□ -1
BDNF-218ENST00000533246 ADAMTSL4-AS1Q5T5F5 129 aa8.79□□□□□ -1
BDNF-218ENST00000533246 CDC42SE2Q9NRR3 84 aa8.79□□□□□ -1
BDNF-218ENST00000533246 IGLV4-60A0A075B6I1 120 aa8.78□□□□□ -1
BDNF-218ENST00000533246 DEFB131BA0A096LNP1 70 aa8.78□□□□□ -1
BDNF-218ENST00000533246 Q6JHZ5 121 aa8.78□□□□□ -1
BDNF-218ENST00000533246 LINC00959A0A1B0GUT2 108 aa8.77□□□□□ -1
BDNF-218ENST00000533246 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.77□□□□□ -1
BDNF-218ENST00000533246 DIRC1Q969H9 104 aa8.77□□□□□ -1
BDNF-218ENST00000533246 A0A096LNI7 61 aa8.77□□□□□ -1.01
BDNF-218ENST00000533246 NDUFC1O43677 76 aa8.77□□□□□ -1.01
BDNF-218ENST00000533246 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
BDNF-218ENST00000533246 LYRM9A8MSI8 78 aa8.77□□□□□ -1.01
BDNF-218ENST00000533246 C9orf116Q5BN46 136 aaPredicted RBP8.77□□□□□ -1.01
BDNF-218ENST00000533246 Q5XG85 94 aa8.77□□□□□ -1.01
BDNF-218ENST00000533246 CHCHD7Q9BUK0 85 aa8.76□□□□□ -1.01
BDNF-218ENST00000533246 KIF25-AS1Q9Y6Z4 181 aa8.76□□□□□ -1.01
BDNF-218ENST00000533246 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
BDNF-218ENST00000533246 ATP5EP56381 51 aaPredicted RBP8.76□□□□□ -1.01
BDNF-218ENST00000533246 STAB1Q9NY15 2570 aa8.76□□□□□ -1.01
BDNF-218ENST00000533246 CDK2AP2O75956 126 aa8.75□□□□□ -1.01
BDNF-218ENST00000533246 CCKP06307 115 aa8.75□□□□□ -1.01
BDNF-218ENST00000533246 FAM19A1Q7Z5A9 133 aa8.75□□□□□ -1.01
BDNF-218ENST00000533246 SCXQ7RTU7 201 aa8.75□□□□□ -1.01
BDNF-218ENST00000533246 UBR5O95071 2799 aaPredicted RBP8.75□□□□□ -1.01
BDNF-218ENST00000533246 NOTCH1P46531 2555 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 FLNCQ14315 2725 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 NREPQ16612 68 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 SMIM1B2RUZ4 78 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 CHKB-CPT1BH3BT56 60 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 IGLV1-51P01701 117 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 MIFP14174 115 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 PRR4Q16378 134 aa8.74□□□□□ -1.01
BDNF-218ENST00000533246 NBEAL1Q6ZS30 2694 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 LINC00315P59091 139 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 JMJD7-PLA2G4BH0Y9G9 81 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 TMEM256-PLSCR3K7ERE1 68 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 SMIM11BQ8TCY0 68 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 LINC00846Q9NV44 126 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 IGHV4-30-4P0DP06 118 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 LOC400499M0QZD8 3231 aa8.73□□□□□ -1.01
BDNF-218ENST00000533246 KPRPQ5T749 579 aaPredicted RBP8.72□□□□□ -1.01
BDNF-218ENST00000533246 HIGD2AQ9BW72 106 aa8.72□□□□□ -1.01
BDNF-218ENST00000533246 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.72□□□□□ -1.01
BDNF-218ENST00000533246 IGKV2-28A0A075B6P5 120 aa8.72□□□□□ -1.01
BDNF-218ENST00000533246 IGKV2D-28P01615 120 aa8.72□□□□□ -1.01
BDNF-218ENST00000533246 UNQ6190/PRO20217Q6UXQ8 127 aa8.72□□□□□ -1.01
BDNF-218ENST00000533246 SMCR5Q8TEV8 140 aa8.72□□□□□ -1.01
BDNF-218ENST00000533246 COX7BP24311 80 aa8.71□□□□□ -1.01
BDNF-218ENST00000533246 CD164L2Q6UWJ8 174 aa8.71□□□□□ -1.02
BDNF-218ENST00000533246 SPTBN5Q9NRC6 3674 aaKnown RBP8.71□□□□□ -1.02
BDNF-218ENST00000533246 ATP5EP2Q5VTU8 51 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms