RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 MUSTN1Q8IVN3 82 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 C22orf24Q9Y442 160 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 TRIOO75962 3097 aa3.15□□□□□ -1.91
ECHDC1-222ENST00000531967 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
ECHDC1-222ENST00000531967 KRTAP9-4Q9BYQ2 154 aa3.14□□□□□ -1.91
ECHDC1-222ENST00000531967 CACNA1DQ01668 2161 aa3.14□□□□□ -1.91
ECHDC1-222ENST00000531967 TRBV6-8A0A0A6YYG3 113 aa3.14□□□□□ -1.91
ECHDC1-222ENST00000531967 NDPQ00604 133 aa3.14□□□□□ -1.91
ECHDC1-222ENST00000531967 LINC00846Q9NV44 126 aa3.14□□□□□ -1.91
ECHDC1-222ENST00000531967 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 PI4KAP42356 2102 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 PRCDQ00LT1 54 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 LINC00322Q6ZN03 302 aaPredicted RBP3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 U3KQA8 63 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 MED12Q93074 2177 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 WDR87Q6ZQQ6 2873 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 RTTNQ86VV8 2226 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 TRAV12-3A0A0B4J271 114 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 NDUFA3O95167 84 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 CNFNQ9BYD5 112 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 CDC42SE2Q9NRR3 84 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 ZGRF1Q86YA3 2104 aa3.13□□□□□ -1.91
ECHDC1-222ENST00000531967 KRTAP29-1A8MX34 341 aaPredicted RBP3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 MRPL33O75394 65 aaKnown RBP3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 SPINK9Q5DT21 86 aa3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 C10orf113Q5VZT2 155 aa3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 LINC00167Q96N53 147 aa3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 KIF25-AS1Q9Y6Z4 181 aa3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 TMEM14CQ9P0S9 112 aa3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 PSORS1C2Q9UIG4 136 aa3.12□□□□□ -1.91
ECHDC1-222ENST00000531967 VCANP13611 3396 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 ENHOQ6UWT2 76 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 LYPD1Q8N2G4 141 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 Q9BRP9 147 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 KRTAP4-9Q9BYQ8 210 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 I3L3M4 83 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 CSAG1Q6PB30 78 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 EYSQ5T1H1 3165 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 MYO15AQ9UKN7 3530 aa3.11□□□□□ -1.91
ECHDC1-222ENST00000531967 M0R1W7 72 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 FDCSPQ8NFU4 85 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 PRR15LQ9BU68 103 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 CNTRLQ7Z7A1 2325 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 LOC101927531A0A1B0GV80 90 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 PDE6HQ13956 83 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 NREPQ16612 68 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 SDK1Q7Z5N4 2213 aa3.1□□□□□ -1.91
ECHDC1-222ENST00000531967 LRCOL1A6NCL2 159 aa3.09□□□□□ -1.91
ECHDC1-222ENST00000531967 CNBPP62633 177 aaKnown RBP3.09□□□□□ -1.91
ECHDC1-222ENST00000531967 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
ECHDC1-222ENST00000531967 TRBV10-1A0A0K0K1A3 114 aa3.09□□□□□ -1.91
ECHDC1-222ENST00000531967 SAA2P0DJI9 122 aaPredicted RBP3.09□□□□□ -1.91
ECHDC1-222ENST00000531967 OBSCN-AS1Q96MR7 158 aa3.09□□□□□ -1.91
ECHDC1-222ENST00000531967 DOCK10Q96BY6 2186 aa3.09□□□□□ -1.92
ECHDC1-222ENST00000531967 M0R3E3 92 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 IGKV3-20P01619 116 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 UBL5Q9BZL1 73 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 NDUFA4L2Q9NRX3 87 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 PRUNE2Q8WUY3 3088 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 FREM1Q5H8C1 2179 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 IGIPA6NJ69 53 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 C1orf137Q5JT78 98 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 TTTY12Q9BZ98 90 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 SPEGQ15772 3267 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 KNTC1P50748 2209 aa3.08□□□□□ -1.92
ECHDC1-222ENST00000531967 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 SPINK14Q6IE38 97 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 Q6ZTI0 123 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 WDFY3Q8IZQ1 3526 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 CFAP54Q96N23 3096 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 WFDC9Q8NEX5 89 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 KRTAP4-12Q9BQ66 201 aa3.07□□□□□ -1.92
ECHDC1-222ENST00000531967 RTL8CO15255 209 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 CRIP1P50238 77 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 RPL39P5Q59GN2 51 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 TMEM167AQ8TBQ9 72 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 DNAJC13O75165 2243 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 CTSGP08311 255 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 LY6EQ16553 131 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 MRPL36Q9P0J6 103 aaKnown RBP3.06□□□□□ -1.92
ECHDC1-222ENST00000531967 ZFHX2Q9C0A1 2572 aaPredicted RBP3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 TNCP24821 2201 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 H3BRN7 92 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 HRES1P13985 223 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 TRBV6-5A0A0K0K1A5 114 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 IGKV3-15P01624 115 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 ELOF1P60002 83 aaKnown RBP3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 LCE1DQ5T752 114 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 AMELXQ99217 191 aa3.05□□□□□ -1.92
ECHDC1-222ENST00000531967 INTS1Q8N201 2190 aaKnown RBP3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 TRAV21A0A0B4J279 112 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 A0A1W2PNU3 283 aaPredicted RBP3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 NUPR2A6NF83 97 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 PPP1R17O96001 155 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 MRGPRG-AS1Q2M3A8 158 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 SMIM2Q9BVW6 85 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 CACNA1GO43497 2377 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 DEFB108AA8MXU0 73 aa3.04□□□□□ -1.92
ECHDC1-222ENST00000531967 ORMDL1Q9P0S3 153 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms