RNA–Protein interactions for RNA: ENST00000530809.2

VPS11-204, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-204ENST00000530809 PRO0255Q9UI72 69 aa3.71□□□□□ -1.82
VPS11-204ENST00000530809 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
VPS11-204ENST00000530809 TRBV20-1A0A075B6N2 111 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 TRBV6-8A0A0A6YYG3 113 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 IGLV5-39A0A0G2JS06 123 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 NDUFA1O15239 70 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 IGHV3-30P01768 117 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 ATP5G1P05496 136 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 IGHV3-30-5P0DP03 117 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 XGP55808 180 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 TSPEAR-AS2P59090 65 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 CIRBPQ14011 172 aaKnown RBP3.7□□□□□ -1.82
VPS11-204ENST00000530809 SERTAD4-AS1Q5TG53 156 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 CDC42SE2Q9NRR3 84 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 NDUFA12Q9UI09 145 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 LINC00588Q9Y4M8 146 aa3.7□□□□□ -1.82
VPS11-204ENST00000530809 DYNC1H1Q14204 4646 aaKnown RBP3.7□□□□□ -1.82
VPS11-204ENST00000530809 IGHV3-38A0A0C4DH36 116 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 A0A1B0GUV1 79 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 GAGE12JA6NER3 117 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 K7ERU9 68 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 PRM2P04554 102 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 GAGE4Q13068 117 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 GAGE5Q13069 117 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 FHL2Q14192 279 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 MIAQ16674 131 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 GAGE13Q4V321 117 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 LINC01561Q8N1V8 128 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 C10orf126Q8N4M7 172 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 FAM104AQ969W3 186 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 RAB37Q96AX2 223 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 OPRPNQ99935 248 aaPredicted RBP3.69□□□□□ -1.82
VPS11-204ENST00000530809 UPK3BQ9BT76 320 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 HERC1Q15751 4861 aa3.69□□□□□ -1.82
VPS11-204ENST00000530809 F5H768 121 aa3.68□□□□□ -1.82
VPS11-204ENST00000530809 F8W1H4 67 aa3.68□□□□□ -1.82
VPS11-204ENST00000530809 LINC00242Q5T6M2 205 aa3.68□□□□□ -1.82
VPS11-204ENST00000530809 NTM-AS1Q6ZSK4 140 aa3.68□□□□□ -1.82
VPS11-204ENST00000530809 ATP6V0E2Q8NHE4 81 aa3.68□□□□□ -1.82
VPS11-204ENST00000530809 CDKN2A-AS1Q9UH64 79 aa3.68□□□□□ -1.82
VPS11-204ENST00000530809 SMIM1B2RUZ4 78 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 J3QR89 54 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 K7ERJ3 54 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 M0QXV9 152 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 DEFB130BP0DP73 79 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 DEFB130AP0DP74 79 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 CHCHD5Q9BSY4 110 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 KRTAP1-5Q9BYS1 174 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 Q9UF83 564 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 PRO1854Q9UHT4 67 aa3.67□□□□□ -1.82
VPS11-204ENST00000530809 FLG2Q5D862 2391 aaPredicted RBP3.67□□□□□ -1.82
VPS11-204ENST00000530809 TRAV8-3A0A0A6YYJ7 113 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 TRAV13-1A0A0B4J241 112 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 KRTAP29-1A8MX34 341 aaPredicted RBP3.66□□□□□ -1.82
VPS11-204ENST00000530809 H3BNG1 76 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 PAX4O43316 350 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 TSPAN13O95857 204 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 COX6CP09669 75 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 SPINK8P0C7L1 97 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 GYPEP15421 78 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 CXCL5P42830 114 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 Q6ZRN7 208 aaPredicted RBP3.66□□□□□ -1.82
VPS11-204ENST00000530809 DEFB104AQ8WTQ1 72 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 LITAFQ99732 161 aa3.66□□□□□ -1.82
VPS11-204ENST00000530809 IGHV3-64A0A075B6Q5 118 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 A0A087WZ39 114 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 A4D1N5 150 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 APOMO95445 188 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 SMR3BP02814 79 aaPredicted RBP3.65□□□□□ -1.83
VPS11-204ENST00000530809 PLA2G1BP04054 148 aaKnown RBP3.65□□□□□ -1.83
VPS11-204ENST00000530809 CFC1BP0CG36 223 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 CFC1P0CG37 223 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 SS18Q15532 418 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 MRPL23Q16540 153 aaKnown RBP3.65□□□□□ -1.83
VPS11-204ENST00000530809 RNASE13Q5GAN3 156 aaKnown RBP3.65□□□□□ -1.83
VPS11-204ENST00000530809 ZNF625Q96I27 306 aaPredicted RBP3.65□□□□□ -1.83
VPS11-204ENST00000530809 ERG28Q9UKR5 140 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 PLA2G2DQ9UNK4 145 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 CBY1Q9Y3M2 126 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 ICOSQ9Y6W8 199 aa3.65□□□□□ -1.83
VPS11-204ENST00000530809 APOBP04114 4563 aaKnown RBP3.64□□□□□ -1.83
VPS11-204ENST00000530809 IGHV3OR16-9A0A0B4J2B5 98 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 TRBV30A0A0K0K1B3 111 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 LOC100131303A0A0U1RQF7 123 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 IBA57-AS1B1ANH7 110 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 IGHV3-33P01772 117 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 KRTAP10-1P60331 282 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 GAGE6Q13070 117 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 ESRGQ1W209 222 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 MEIG1Q5JSS6 88 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 LELP1Q5T871 98 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 MUSTN1Q8IVN3 82 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 Q8IZM0 81 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 COX7B2Q8TF08 81 aa3.64□□□□□ -1.83
VPS11-204ENST00000530809 A0A087WTM6 91 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 LOC107984156A0A0G2JMH3 177 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 LINC00959A0A1B0GUT2 108 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 H3BMG7 143 aa3.63□□□□□ -1.83
VPS11-204ENST00000530809 RBX1P62877 108 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms