RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 Q8IZM0 81 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 DIRC1Q969H9 104 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 GNB1LQ9BYB4 327 aa8.38□□□□□ -1.07
TCOF1-215ENST00000515516 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
TCOF1-215ENST00000515516 TNXBP22105 4242 aa8.37□□□□□ -1.07
TCOF1-215ENST00000515516 LINC00469Q8N7U9 141 aa8.36□□□□□ -1.07
TCOF1-215ENST00000515516 IFITM2Q01629 132 aa8.35□□□□□ -1.07
TCOF1-215ENST00000515516 FA2HQ7L5A8 372 aa8.35□□□□□ -1.07
TCOF1-215ENST00000515516 COMMD7Q86VX2 200 aa8.35□□□□□ -1.07
TCOF1-215ENST00000515516 SMCO4Q9NRQ5 59 aa8.35□□□□□ -1.07
TCOF1-215ENST00000515516 F8VRH5 84 aa8.34□□□□□ -1.07
TCOF1-215ENST00000515516 CXCL5P42830 114 aa8.34□□□□□ -1.07
TCOF1-215ENST00000515516 FABP9Q0Z7S8 132 aa8.34□□□□□ -1.07
TCOF1-215ENST00000515516 C9orf129Q5T035 196 aaKnown RBP8.34□□□□□ -1.07
TCOF1-215ENST00000515516 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
TCOF1-215ENST00000515516 LBHQ53QV2 105 aaPredicted RBP8.33□□□□□ -1.08
TCOF1-215ENST00000515516 MRPL18Q9H0U6 180 aaKnown RBP8.33□□□□□ -1.08
TCOF1-215ENST00000515516 RPS10P5Q9NQ39 176 aa8.33□□□□□ -1.08
TCOF1-215ENST00000515516 H0Y9J4 135 aa8.32□□□□□ -1.08
TCOF1-215ENST00000515516 ODF1Q14990 250 aa8.32□□□□□ -1.08
TCOF1-215ENST00000515516 RHEBQ15382 184 aa8.32□□□□□ -1.08
TCOF1-215ENST00000515516 PDZD11Q5EBL8 140 aa8.32□□□□□ -1.08
TCOF1-215ENST00000515516 KRTAP11-1Q8IUC1 163 aa8.32□□□□□ -1.08
TCOF1-215ENST00000515516 KRTAP7-1Q8IUC3 87 aa8.32□□□□□ -1.08
TCOF1-215ENST00000515516 LINC01546A6NGU7 62 aa8.31□□□□□ -1.08
TCOF1-215ENST00000515516 PMVKQ15126 192 aa8.31□□□□□ -1.08
TCOF1-215ENST00000515516 COX7B2Q8TF08 81 aa8.31□□□□□ -1.08
TCOF1-215ENST00000515516 CST9LQ9H4G1 147 aa8.31□□□□□ -1.08
TCOF1-215ENST00000515516 XAGE1AQ9HD64 81 aa8.31□□□□□ -1.08
TCOF1-215ENST00000515516 C22orf24Q9Y442 160 aa8.31□□□□□ -1.08
TCOF1-215ENST00000515516 UBR4Q5T4S7 5183 aa8.29□□□□□ -1.08
TCOF1-215ENST00000515516 SMIM1B2RUZ4 78 aa8.29□□□□□ -1.08
TCOF1-215ENST00000515516 H3BRM9 83 aa8.29□□□□□ -1.08
TCOF1-215ENST00000515516 IGLV5-45A0A087WSX0 123 aa8.28□□□□□ -1.08
TCOF1-215ENST00000515516 NUPR1O60356 82 aa8.28□□□□□ -1.08
TCOF1-215ENST00000515516 SPINK8P0C7L1 97 aa8.28□□□□□ -1.08
TCOF1-215ENST00000515516 NDUFA6P56556 154 aa8.28□□□□□ -1.08
TCOF1-215ENST00000515516 C10orf91Q5T1B1 145 aa8.28□□□□□ -1.08
TCOF1-215ENST00000515516 PRR26Q8N8Z3 221 aa8.28□□□□□ -1.08
TCOF1-215ENST00000515516 CARHSP1Q9Y2V2 147 aaKnown RBP8.28□□□□□ -1.08
TCOF1-215ENST00000515516 TRAPPC1Q9Y5R8 145 aa8.27□□□□□ -1.09
TCOF1-215ENST00000515516 IGLV1-50A0A075B6I6 118 aa8.26□□□□□ -1.09
TCOF1-215ENST00000515516 ZNF861PO60384 105 aa8.26□□□□□ -1.09
TCOF1-215ENST00000515516 ATP5LO75964 103 aa8.26□□□□□ -1.09
TCOF1-215ENST00000515516 RAB5BP61020 215 aa8.26□□□□□ -1.09
TCOF1-215ENST00000515516 MRPL55Q7Z7F7 128 aaKnown RBP8.26□□□□□ -1.09
TCOF1-215ENST00000515516 TP73-AS1Q9UF72 201 aa8.26□□□□□ -1.09
TCOF1-215ENST00000515516 LINC00614P0C842 121 aa8.25□□□□□ -1.09
TCOF1-215ENST00000515516 RPL13AP40429 203 aaKnown RBP8.24□□□□□ -1.09
TCOF1-215ENST00000515516 NDUFA5Q16718 116 aa8.24□□□□□ -1.09
TCOF1-215ENST00000515516 HBDP02042 147 aa8.23□□□□□ -1.09
TCOF1-215ENST00000515516 IGLC3P0DOY3 106 aa8.23□□□□□ -1.09
TCOF1-215ENST00000515516 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
TCOF1-215ENST00000515516 BCE1O60756 84 aa8.22□□□□□ -1.09
TCOF1-215ENST00000515516 SNAPINO95295 136 aa8.22□□□□□ -1.09
TCOF1-215ENST00000515516 APOC3P02656 99 aa8.22□□□□□ -1.09
TCOF1-215ENST00000515516 NKAPP1Q8N9T2 125 aa8.22□□□□□ -1.09
TCOF1-215ENST00000515516 C18orf32Q8TCD1 76 aa8.22□□□□□ -1.09
TCOF1-215ENST00000515516 RPL37AP8A6NKH3 93 aa8.21□□□□□ -1.1
TCOF1-215ENST00000515516 KRTAP1-4P0C5Y4 121 aa8.21□□□□□ -1.1
TCOF1-215ENST00000515516 SVBPQ8N300 66 aa8.21□□□□□ -1.1
TCOF1-215ENST00000515516 LINC00167Q96N53 147 aa8.21□□□□□ -1.1
TCOF1-215ENST00000515516 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
TCOF1-215ENST00000515516 PFN2P35080 140 aa8.2□□□□□ -1.1
TCOF1-215ENST00000515516 A0A096LNJ9 63 aa8.19□□□□□ -1.1
TCOF1-215ENST00000515516 IGLV5-39A0A0G2JS06 123 aa8.19□□□□□ -1.1
TCOF1-215ENST00000515516 ZNF22P17026 224 aaPredicted RBP8.19□□□□□ -1.1
TCOF1-215ENST00000515516 PMCHL1Q16048 86 aa8.19□□□□□ -1.1
TCOF1-215ENST00000515516 BAGE3Q86Y29 109 aa8.19□□□□□ -1.1
TCOF1-215ENST00000515516 IGLV5-37A0A075B6J1 123 aa8.18□□□□□ -1.1
TCOF1-215ENST00000515516 TMEM170BQ5T4T1 132 aa8.18□□□□□ -1.1
TCOF1-215ENST00000515516 URB1-AS1Q96HZ7 61 aa8.18□□□□□ -1.1
TCOF1-215ENST00000515516 UBE2AP49459 152 aa8.17□□□□□ -1.1
TCOF1-215ENST00000515516 SFTA2Q6UW10 78 aa8.17□□□□□ -1.1
TCOF1-215ENST00000515516 ERG28Q9UKR5 140 aa8.17□□□□□ -1.1
TCOF1-215ENST00000515516 RPL24P83731 157 aaKnown RBP8.16□□□□□ -1.1
TCOF1-215ENST00000515516 COX17Q14061 63 aa8.16□□□□□ -1.1
TCOF1-215ENST00000515516 LRP2P98164 4655 aa8.16□□□□□ -1.1
TCOF1-215ENST00000515516 ZNF625Q96I27 306 aaPredicted RBP8.15□□□□□ -1.1
TCOF1-215ENST00000515516 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
TCOF1-215ENST00000515516 IGKV2-28A0A075B6P5 120 aa8.14□□□□□ -1.11
TCOF1-215ENST00000515516 C11orf86A6NJI1 115 aa8.14□□□□□ -1.11
TCOF1-215ENST00000515516 IGKV2D-28P01615 120 aa8.14□□□□□ -1.11
TCOF1-215ENST00000515516 CRYGAP11844 174 aa8.14□□□□□ -1.11
TCOF1-215ENST00000515516 CHCHD1Q96BP2 118 aaKnown RBP8.14□□□□□ -1.11
TCOF1-215ENST00000515516 SND1-IT1Q9HBX3 110 aa8.14□□□□□ -1.11
TCOF1-215ENST00000515516 PRR4Q16378 134 aa8.13□□□□□ -1.11
TCOF1-215ENST00000515516 SCO1O75880 301 aa8.12□□□□□ -1.11
TCOF1-215ENST00000515516 TYMSOSQ8TAI1 123 aa8.12□□□□□ -1.11
TCOF1-215ENST00000515516 IFI27L1Q96BM0 104 aa8.12□□□□□ -1.11
TCOF1-215ENST00000515516 VPREB1P12018 145 aa8.11□□□□□ -1.11
TCOF1-215ENST00000515516 LINC00158P58513 81 aa8.11□□□□□ -1.11
TCOF1-215ENST00000515516 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
TCOF1-215ENST00000515516 ATP6V1G1O75348 118 aa8.1□□□□□ -1.11
TCOF1-215ENST00000515516 TSPAN13O95857 204 aa8.1□□□□□ -1.11
TCOF1-215ENST00000515516 FAM19A1Q7Z5A9 133 aa8.1□□□□□ -1.11
TCOF1-215ENST00000515516 A0A087X002 238 aa8.09□□□□□ -1.11
TCOF1-215ENST00000515516 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
TCOF1-215ENST00000515516 HSBP1O75506 76 aa8.08□□□□□ -1.12
TCOF1-215ENST00000515516 KRTAP13-1Q8IUC0 172 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms