RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 DNAJC13O75165 2243 aa0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 EDC4Q6P2E9 1401 aaKnown RBP0.7□□□□□ -2.3
TRAPPC13-209ENST00000508304 KNDC1Q76NI1 1749 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 XRN1Q8IZH2 1706 aaKnown RBP0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 CHD9Q3L8U1 2897 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 FANCAO15360 1455 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 NRXN1Q9ULB1 1477 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 PAPPAQ13219 1627 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 LINC00959A0A1B0GUT2 108 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 WFDC2Q14508 124 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 ALKAL2Q6UX46 152 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 C20orf78Q9BR46 151 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 ZFYVE26Q68DK2 2539 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 IGF2RP11717 2491 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 NAV2Q8IVL1 2488 aa0.69□□□□□ -2.3
TRAPPC13-209ENST00000508304 AHNAKQ09666 5890 aaKnown RBP0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 LAMC1P11047 1609 aa0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 KRTAP2-3P0C7H8 128 aa0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 PYY3Q5JQD4 70 aa0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 USMG5Q96IX5 58 aa0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 KRTAP2-4Q9BYR9 128 aa0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 KRTAP2-1Q9BYU5 128 aa0.68□□□□□ -2.3
TRAPPC13-209ENST00000508304 CCDC141Q6ZP82 1450 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 A0A0G2JMZ2 1700 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 CYB5AP00167 134 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 S100A16Q96FQ6 103 aaKnown RBP0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 PSENENQ9NZ42 101 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 HIGD1BQ9P298 99 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 NHSL1Q5SYE7 1610 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 MON2Q7Z3U7 1717 aa0.67□□□□□ -2.3
TRAPPC13-209ENST00000508304 ZNF292O60281 2723 aa0.66□□□□□ -2.3
TRAPPC13-209ENST00000508304 COX6B1P14854 86 aa0.66□□□□□ -2.3
TRAPPC13-209ENST00000508304 FXYD6Q9H0Q3 95 aa0.66□□□□□ -2.3
TRAPPC13-209ENST00000508304 USF3Q68DE3 2245 aa0.66□□□□□ -2.3
TRAPPC13-209ENST00000508304 K7EP34 96 aa0.65□□□□□ -2.31
TRAPPC13-209ENST00000508304 HMGN2P05204 90 aaKnown RBP0.65□□□□□ -2.31
TRAPPC13-209ENST00000508304 COX8AP10176 69 aa0.65□□□□□ -2.31
TRAPPC13-209ENST00000508304 DEFB109BQ30KR1 87 aa0.65□□□□□ -2.31
TRAPPC13-209ENST00000508304 IQSEC2Q5JU85 1478 aa0.65□□□□□ -2.31
TRAPPC13-209ENST00000508304 CELSR2Q9HCU4 2923 aa0.65□□□□□ -2.31
TRAPPC13-209ENST00000508304 ABCC3O15438 1527 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 TULP4Q9NRJ4 1543 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 C9orf62Q8N4C0 152 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 DEFB123Q8N688 67 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 CEP162Q5TB80 1403 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 ANK2Q01484 3957 aa0.64□□□□□ -2.31
TRAPPC13-209ENST00000508304 PKDREJQ9NTG1 2253 aa0.63□□□□□ -2.31
TRAPPC13-209ENST00000508304 PLIN4Q96Q06 1357 aa0.63□□□□□ -2.31
TRAPPC13-209ENST00000508304 Q5VSD8 79 aa0.63□□□□□ -2.31
TRAPPC13-209ENST00000508304 RGPD4Q7Z3J3 1758 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 RB1CC1Q8TDY2 1594 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 CRIPTQ9P021 101 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 RABAC1Q9UI14 185 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 U3KQA8 63 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 PTPRQQ9UMZ3 2332 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 CUX1P39880 1505 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 SPTBN1Q01082 2364 aaKnown RBP0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 ANKRD17O75179 2603 aaKnown RBP0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 C5P01031 1676 aa0.62□□□□□ -2.31
TRAPPC13-209ENST00000508304 TARBP1Q13395 1621 aaKnown RBP0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 MYO3AQ8NEV4 1616 aa0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 K7EQZ3 153 aa0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 PLGLAQ15195 96 aa0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 MYH4Q9Y623 1939 aa0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 SHPRHQ149N8 1683 aa0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 URB1O60287 2271 aaKnown RBP0.61□□□□□ -2.31
TRAPPC13-209ENST00000508304 SPRR1AP35321 89 aa0.6□□□□□ -2.31
TRAPPC13-209ENST00000508304 SNRPFP62306 86 aaKnown RBP0.6□□□□□ -2.31
TRAPPC13-209ENST00000508304 NMSQ5H8A3 153 aa0.6□□□□□ -2.31
TRAPPC13-209ENST00000508304 UACAQ9BZF9 1416 aa0.6□□□□□ -2.31
TRAPPC13-209ENST00000508304 RGPD3A6NKT7 1758 aaPredicted RBP0.6□□□□□ -2.31
TRAPPC13-209ENST00000508304 PIEZO2Q9H5I5 2752 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 KIAA1551Q9HCM1 1747 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 GPR98Q8WXG9 6306 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 I3L3M4 83 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 IGLC2P0DOY2 106 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 IGLC3P0DOY3 106 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 DEFB112Q30KQ8 113 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 UBE2D4Q9Y2X8 147 aa0.59□□□□□ -2.31
TRAPPC13-209ENST00000508304 PAPPA2Q9BXP8 1791 aa0.59□□□□□ -2.32
TRAPPC13-209ENST00000508304 KIAA0556O60303 1618 aa0.58□□□□□ -2.32
TRAPPC13-209ENST00000508304 SPTY2D1-AS1A0A0U1RR47 76 aa0.58□□□□□ -2.32
TRAPPC13-209ENST00000508304 PPRC1Q5VV67 1664 aaKnown RBP0.58□□□□□ -2.32
TRAPPC13-209ENST00000508304 CRYBG1Q9Y4K1 1723 aa0.58□□□□□ -2.32
TRAPPC13-209ENST00000508304 OTOGQ6ZRI0 2925 aa0.58□□□□□ -2.32
TRAPPC13-209ENST00000508304 A0A1B0GUT8 65 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 IQCF6A8MYZ5 107 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 SPRR1BP22528 89 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 ANKRD36A6QL64 1941 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 UNC79Q9P2D8 2635 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 SAMD9Q5K651 1589 aa0.57□□□□□ -2.32
TRAPPC13-209ENST00000508304 MYMXA0A1B0GTQ4 84 aa0.56□□□□□ -2.32
TRAPPC13-209ENST00000508304 KANTRA0A1W2PQU2 76 aa0.56□□□□□ -2.32
TRAPPC13-209ENST00000508304 SPINK4O60575 86 aa0.56□□□□□ -2.32
TRAPPC13-209ENST00000508304 TSC2P49815 1807 aa0.56□□□□□ -2.32
TRAPPC13-209ENST00000508304 LRRC37AA6NMS7 1700 aa0.55□□□□□ -2.32
TRAPPC13-209ENST00000508304 CCDC18Q5T9S5 1454 aa0.55□□□□□ -2.32
TRAPPC13-209ENST00000508304 CPSF4LA6NMK7 179 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms