RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 ATOX1O00244 68 aa5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 NFE4Q86UQ8 179 aa5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 KPRPQ5T749 579 aaPredicted RBP5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 IGKV3D-7A0A0C4DH55 119 aa5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 TRBV10-2A0A0K0K1G8 114 aa5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 CHKB-CPT1BH3BT56 60 aa5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 ZNF22P17026 224 aaPredicted RBP5.79□□□□□ -1.48
HLA-DMB-262ENST00000498020 PRM2P04554 102 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 COX7BP24311 80 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 Q6ZTC4 211 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 REG3AQ06141 175 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 SBSPONQ8IVN8 264 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 B9D2Q9BPU9 175 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 TMEM223A0PJW6 202 aa5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 CEMP1Q6PRD7 247 aaPredicted RBP5.78□□□□□ -1.48
HLA-DMB-262ENST00000498020 WFDC2Q14508 124 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 BEAN1Q3B7T3 259 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 LINC00269Q8N2A0 174 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 HIGD2AQ9BW72 106 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 SPANXB1Q9NS25 103 aaPredicted RBP5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 IGLV4-69A0A075B6H9 119 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 FHL3Q13643 280 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 A8MTW9 85 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 IGLV1-51P01701 117 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 MIAQ16674 131 aa5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 RNASE8Q8TDE3 154 aaKnown RBP5.77□□□□□ -1.49
HLA-DMB-262ENST00000498020 C1orf134Q5TEV5 83 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 C1orf158Q8N1D5 194 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 B5MCH6 92 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 SMIM20Q8N5G0 67 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 H7C423 109 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 C5orf47Q569G3 176 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 WFDC9Q8NEX5 89 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 KIR2DL5BQ8NHK3 375 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 CLEC2BQ92478 149 aa5.76□□□□□ -1.49
HLA-DMB-262ENST00000498020 FAM236AA0A1B0GUQ0 79 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 FAM236BA0A1B0GV22 79 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 KRTAP1-3Q8IUG1 177 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 CHCHD10Q8WYQ3 142 aaPredicted RBP5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 CDKN2A-AS1Q9UH64 79 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 SMG1Q96Q15 3661 aaKnown RBP5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 C14orf132Q9NPU4 83 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 A0A0J9YXY3 114 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 H0Y9J4 135 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 FOXI1Q12951 378 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 C11orf72Q8NBR9 251 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
HLA-DMB-262ENST00000498020 TRBV6-4A0A1B0GX49 114 aa5.74□□□□□ -1.49
HLA-DMB-262ENST00000498020 MRPS36P82909 103 aaKnown RBP5.74□□□□□ -1.49
HLA-DMB-262ENST00000498020 RELNP78509 3460 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 IBA57-AS1B1ANH7 110 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 AMELXQ99217 191 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 TRBV6-8A0A0A6YYG3 113 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 BPY2O14599 106 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 CHCHD7Q9BUK0 85 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
HLA-DMB-262ENST00000498020 A0A087WZ39 114 aa5.72□□□□□ -1.49
HLA-DMB-262ENST00000498020 Q6ZSN1 163 aa5.72□□□□□ -1.49
HLA-DMB-262ENST00000498020 SYCNQ0VAF6 134 aa5.72□□□□□ -1.49
HLA-DMB-262ENST00000498020 UBE2D3P61077 147 aa5.71□□□□□ -1.49
HLA-DMB-262ENST00000498020 UBE2D2P62837 147 aa5.71□□□□□ -1.49
HLA-DMB-262ENST00000498020 FAM19A1Q7Z5A9 133 aa5.71□□□□□ -1.5
HLA-DMB-262ENST00000498020 C16orf90A8MZG2 172 aa5.71□□□□□ -1.5
HLA-DMB-262ENST00000498020 UBE2D1P51668 147 aa5.71□□□□□ -1.5
HLA-DMB-262ENST00000498020 C7orf33Q8WU49 177 aa5.71□□□□□ -1.5
HLA-DMB-262ENST00000498020 A0A096LNI7 61 aa5.7□□□□□ -1.5
HLA-DMB-262ENST00000498020 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
HLA-DMB-262ENST00000498020 K7EIL1 84 aa5.7□□□□□ -1.5
HLA-DMB-262ENST00000498020 RBX1P62877 108 aa5.7□□□□□ -1.5
HLA-DMB-262ENST00000498020 XAGE1AQ9HD64 81 aa5.7□□□□□ -1.5
HLA-DMB-262ENST00000498020 J3QL48 77 aa5.7□□□□□ -1.5
HLA-DMB-262ENST00000498020 LINC00308Q8TCZ7 52 aa5.69□□□□□ -1.5
HLA-DMB-262ENST00000498020 CSDC2Q9Y534 153 aaKnown RBP5.69□□□□□ -1.5
HLA-DMB-262ENST00000498020 TCL1BO95988 128 aa5.69□□□□□ -1.5
HLA-DMB-262ENST00000498020 TIMM17BO60830 172 aa5.69□□□□□ -1.5
HLA-DMB-262ENST00000498020 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
HLA-DMB-262ENST00000498020 SEC61GP60059 68 aa5.69□□□□□ -1.5
HLA-DMB-262ENST00000498020 IGLV5-52A0A0A0MRZ9 124 aa5.68□□□□□ -1.5
HLA-DMB-262ENST00000498020 CD164L2Q6UWJ8 174 aa5.68□□□□□ -1.5
HLA-DMB-262ENST00000498020 LRBAP50851 2863 aa5.68□□□□□ -1.5
HLA-DMB-262ENST00000498020 CDC42SE2Q9NRR3 84 aa5.68□□□□□ -1.5
HLA-DMB-262ENST00000498020 CELSR2Q9HCU4 2923 aa5.68□□□□□ -1.5
HLA-DMB-262ENST00000498020 C6orf99Q4VX62 202 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 ASH1LQ9NR48 2969 aaKnown RBP5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 KRTAP1-1Q07627 177 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 LINC00242Q5T6M2 205 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 UPK3BQ9BT76 320 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 LELP1Q5T871 98 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 SS18L2Q9UHA2 77 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 FAM19A5Q7Z5A7 132 aaPredicted RBP5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 Q9UF83 564 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 APCP25054 2843 aa5.67□□□□□ -1.5
HLA-DMB-262ENST00000498020 LOC100131303A0A0U1RQF7 123 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 A8MZ25 164 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 J3KT08 172 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 ATP5EP2Q5VTU8 51 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 TRAV23DV6A0A075B6W5 121 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 USP17L23D6RBM5 183 aa5.66□□□□□ -1.5
HLA-DMB-262ENST00000498020 NDUFC2O95298 119 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms