RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 LINC00305Q7Z4B0 112 aa4.07□□□□□ -1.76
CBX3-206ENST00000481057 TMEM167BQ9NRX6 74 aa4.07□□□□□ -1.76
CBX3-206ENST00000481057 PSENENQ9NZ42 101 aa4.07□□□□□ -1.76
CBX3-206ENST00000481057 HHLA3Q9XRX5 114 aa4.07□□□□□ -1.76
CBX3-206ENST00000481057 R4GMQ9 66 aa4.07□□□□□ -1.76
CBX3-206ENST00000481057 UPK2O00526 184 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 IGKV1D-33P01593 117 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 IGKV1-33P01594 117 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 UBE2D1P51668 147 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 PCP2Q8IVA1 136 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 CALYQ9NYX4 217 aa4.06□□□□□ -1.76
CBX3-206ENST00000481057 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 IGHV1-58A0A0C4DH39 117 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 A0A1B0GWA3 101 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 C19orf71A6NCJ1 209 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 LYRM9A8MSI8 78 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 G3V318 75 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 BCE1O60756 84 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 TCRAP04437 139 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 LGALS3P17931 250 aaKnown RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 CACNG7P62955 275 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 DAZ2Q13117 558 aaKnown RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 SP6Q3SY56 376 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 DAZ4Q86SG3 579 aaKnown RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 PFN4Q8NHR9 129 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 SRSF12Q8WXF0 261 aaKnown RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 ARHGAP5-AS1Q96IT6 56 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 UPK3BQ9BT76 320 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 NPCDR1Q9BY65 106 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 DAZ3Q9NR90 486 aaKnown RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 DSCAML1Q8TD84 2053 aa4.05□□□□□ -1.76
CBX3-206ENST00000481057 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
CBX3-206ENST00000481057 PEX7O00628 323 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 NDUFC1O43677 76 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 ZNF816Q0VGE8 651 aaPredicted RBP4.04□□□□□ -1.76
CBX3-206ENST00000481057 ERCC8Q13216 396 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 DEFB114Q30KQ6 69 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 C10orf128Q5T292 105 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 SCGB1D4Q6XE38 83 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 OR8A1Q8NGG7 326 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 TMEM243Q9BU79 118 aa4.04□□□□□ -1.76
CBX3-206ENST00000481057 USH2AO75445 5202 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 IGKV1D-17A0A075B6S4 117 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 IGKV1D-43A0A0B4J1Z2 117 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 A0A0B4J2C4 111 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 LINC01549A6NIU2 74 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 NDUFS5O43920 106 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 SPINK4O60575 86 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 PLNP26678 52 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 SUB1P53999 127 aaKnown RBP eCLIP4.03□□□□□ -1.762e-102■■■■■ 192.9
CBX3-206ENST00000481057 Q8N9W7 124 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 Q8NAQ8 132 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 DYNLRB2Q8TF09 96 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 EEF1AKMT3Q96AZ1 226 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 METTL26Q96S19 204 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 LHFPL6Q9Y693 200 aa4.03□□□□□ -1.76
CBX3-206ENST00000481057 HIGD1CA8MV81 97 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 MRPS12O15235 138 aaKnown RBP4.02□□□□□ -1.77
CBX3-206ENST00000481057 LTAP01374 205 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 BGLAPP02818 100 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 ARL14EPLP0DKL9 152 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 FCER1GP30273 86 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 FXYD4P59646 89 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 ORMDL2Q53FV1 153 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 ZFP2Q6ZN57 461 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 SDIM1Q6ZPB5 146 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 ZNF492Q9P255 531 aa4.02□□□□□ -1.77
CBX3-206ENST00000481057 LOC100131303A0A0U1RQF7 123 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 BUB1B-PAK6H3BSN5 160 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 IFI27P40305 119 aaPredicted RBP4.01□□□□□ -1.77
CBX3-206ENST00000481057 DAD1P61803 113 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 SNRPD3P62318 126 aaKnown RBP4.01□□□□□ -1.77
CBX3-206ENST00000481057 FXYD3Q14802 87 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 GDF5OSQ5U4N7 250 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 C2orf82Q6UX34 121 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 Q6ZRN7 208 aaPredicted RBP4.01□□□□□ -1.77
CBX3-206ENST00000481057 DAND5Q8N907 189 aa4.01□□□□□ -1.77
CBX3-206ENST00000481057 RPP21Q9H633 154 aaKnown RBP4.01□□□□□ -1.77
CBX3-206ENST00000481057 IGKV1D-42A0A075B6H8 117 aa4□□□□□ -1.77
CBX3-206ENST00000481057 TRAV16A0A0A6YYK6 109 aaPredicted RBP4□□□□□ -1.77
CBX3-206ENST00000481057 IGHV7-81A0A0B4J1V7 117 aa4□□□□□ -1.77
CBX3-206ENST00000481057 TRAV41A0A0B4J266 112 aa4□□□□□ -1.77
CBX3-206ENST00000481057 INS-IGF2F8WCM5 200 aa4□□□□□ -1.77
CBX3-206ENST00000481057 SMKR1H3BMG3 65 aa4□□□□□ -1.77
CBX3-206ENST00000481057 H3BP45 60 aa4□□□□□ -1.77
CBX3-206ENST00000481057 COX6CP09669 75 aa4□□□□□ -1.77
CBX3-206ENST00000481057 CCL1P22362 96 aa4□□□□□ -1.77
CBX3-206ENST00000481057 SPANXN5Q5MJ07 72 aa4□□□□□ -1.77
CBX3-206ENST00000481057 ATP5EP2Q5VTU8 51 aa4□□□□□ -1.77
CBX3-206ENST00000481057 ZNF714Q96N38 554 aa4□□□□□ -1.77
CBX3-206ENST00000481057 PRO1854Q9UHT4 67 aa4□□□□□ -1.77
CBX3-206ENST00000481057 A0A087WTM6 91 aa3.99□□□□□ -1.77
CBX3-206ENST00000481057 TRAV3A0A0B4J244 114 aa3.99□□□□□ -1.77
CBX3-206ENST00000481057 TEX49A0A1B0GTD5 131 aa3.99□□□□□ -1.77
CBX3-206ENST00000481057 UBE2L6O14933 153 aa3.99□□□□□ -1.77
CBX3-206ENST00000481057 TIMM17BO60830 172 aa3.99□□□□□ -1.77
CBX3-206ENST00000481057 IAPPP10997 89 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms