RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 F8VRH5 84 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 H3BRM9 83 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 CXCL5P42830 114 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 RAB5BP61020 215 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 PRR4Q16378 134 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 Q8IZM0 81 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 PRR26Q8N8Z3 221 aa4.33□□□□□ -1.72
COL17A1-205ENST00000480127 IGLV1-50A0A075B6I6 118 aa4.32□□□□□ -1.72
COL17A1-205ENST00000480127 ATP5LO75964 103 aa4.32□□□□□ -1.72
COL17A1-205ENST00000480127 NPSP0C0P6 89 aa4.32□□□□□ -1.72
COL17A1-205ENST00000480127 RPL28P46779 137 aaKnown RBP4.32□□□□□ -1.72
COL17A1-205ENST00000480127 UBE2AP49459 152 aa4.32□□□□□ -1.72
COL17A1-205ENST00000480127 LINC01561Q8N1V8 128 aa4.32□□□□□ -1.72
COL17A1-205ENST00000480127 CDKN2A-AS1Q9UH64 79 aa4.32□□□□□ -1.72
COL17A1-205ENST00000480127 GAGE10A6NGK3 116 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 LINC01549A6NIU2 74 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 FABP9Q0Z7S8 132 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 KIAA0087Q14695 138 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 ERASQ7Z444 233 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 COX7B2Q8TF08 81 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 TIMM17AQ99595 171 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 C22orf24Q9Y442 160 aa4.31□□□□□ -1.72
COL17A1-205ENST00000480127 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 NUPR1O60356 82 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 SPINK8P0C7L1 97 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
COL17A1-205ENST00000480127 MRPL55Q7Z7F7 128 aaKnown RBP4.3□□□□□ -1.72
COL17A1-205ENST00000480127 FAM104AQ969W3 186 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 AMELXQ99217 191 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 MUC2Q02817 5179 aa4.3□□□□□ -1.72
COL17A1-205ENST00000480127 TRAV9-1A0A075B6T8 112 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 KRTAP9-6A0A140TA67 174 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 TINCRA0A1B0GVN0 87 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 IGIPA6NJ69 53 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 RPL37AP8A6NKH3 93 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 ZNF861PO60384 105 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 ATP6V1G1O75348 118 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 TSPAN13O95857 204 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 COX19Q49B96 90 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 PDZD11Q5EBL8 140 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 UQCC3Q6UW78 93 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 LINC00173Q6ZV60 143 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 MRPL18Q9H0U6 180 aaKnown RBP4.29□□□□□ -1.72
COL17A1-205ENST00000480127 RPS10P5Q9NQ39 176 aa4.29□□□□□ -1.72
COL17A1-205ENST00000480127 PFN2P35080 140 aa4.28□□□□□ -1.72
COL17A1-205ENST00000480127 PMVKQ15126 192 aa4.28□□□□□ -1.72
COL17A1-205ENST00000480127 CLLU1Q5K131 121 aa4.28□□□□□ -1.72
COL17A1-205ENST00000480127 COMMD7Q86VX2 200 aa4.28□□□□□ -1.72
COL17A1-205ENST00000480127 GNB1LQ9BYB4 327 aa4.28□□□□□ -1.72
COL17A1-205ENST00000480127 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 TMEM218A2RU14 115 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 SMIM1B2RUZ4 78 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 BCE1O60756 84 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 CRYGAP11844 174 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 ADCYAP1P18509 176 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 NDUFA5Q16718 116 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 LCE2AQ5TA79 106 aaPredicted RBP4.27□□□□□ -1.73
COL17A1-205ENST00000480127 TYMSOSQ8TAI1 123 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 SEC11CQ9BY50 192 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 CST9LQ9H4G1 147 aa4.27□□□□□ -1.73
COL17A1-205ENST00000480127 RPL24P83731 157 aaKnown RBP4.26□□□□□ -1.73
COL17A1-205ENST00000480127 TMEM170BQ5T4T1 132 aa4.26□□□□□ -1.73
COL17A1-205ENST00000480127 KRTAP11-1Q8IUC1 163 aa4.26□□□□□ -1.73
COL17A1-205ENST00000480127 TP73-AS1Q9UF72 201 aa4.26□□□□□ -1.73
COL17A1-205ENST00000480127 CARHSP1Q9Y2V2 147 aaKnown RBP4.26□□□□□ -1.73
COL17A1-205ENST00000480127 TRAPPC1Q9Y5R8 145 aa4.26□□□□□ -1.73
COL17A1-205ENST00000480127 IGKV2D-26A0A0A0MRZ7 120 aa4.25□□□□□ -1.73
COL17A1-205ENST00000480127 RHEBQ15382 184 aa4.25□□□□□ -1.73
COL17A1-205ENST00000480127 FAM19A3Q7Z5A8 133 aa4.25□□□□□ -1.73
COL17A1-205ENST00000480127 FAM19A1Q7Z5A9 133 aa4.25□□□□□ -1.73
COL17A1-205ENST00000480127 ZNF625Q96I27 306 aaPredicted RBP4.25□□□□□ -1.73
COL17A1-205ENST00000480127 LINC00167Q96N53 147 aa4.25□□□□□ -1.73
COL17A1-205ENST00000480127 FAT4Q6V0I7 4981 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 A0A0U1RQV1 116 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 HBDP02042 147 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 LINC00158P58513 81 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 S100A12P80511 92 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 SFTA2Q6UW10 78 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 BAGE3Q86Y29 109 aa4.24□□□□□ -1.73
COL17A1-205ENST00000480127 A0A0U1RRA0 63 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 H0Y8G0 127 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 APOC3P02656 99 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 LINC00614P0C842 121 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 PMCHL1Q16048 86 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 KRTAP7-1Q8IUC3 87 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 ERG28Q9UKR5 140 aa4.23□□□□□ -1.73
COL17A1-205ENST00000480127 IGLV5-45A0A087WSX0 123 aa4.22□□□□□ -1.73
COL17A1-205ENST00000480127 C4orf48Q5BLP8 95 aa4.22□□□□□ -1.73
COL17A1-205ENST00000480127 MEIG1Q5JSS6 88 aa4.22□□□□□ -1.73
COL17A1-205ENST00000480127 HIGD2AQ9BW72 106 aa4.22□□□□□ -1.73
COL17A1-205ENST00000480127 ANAPC11Q9NYG5 84 aa4.22□□□□□ -1.73
COL17A1-205ENST00000480127 SCO1O75880 301 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 SNAPINO95295 136 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 IGLC3P0DOY3 106 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 PRLHP81277 87 aa4.21□□□□□ -1.74
COL17A1-205ENST00000480127 COX17Q14061 63 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms