RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 J3QR89 54 aa8.93□□□□□ -0.98
SEC13-216ENST00000479868 MRPL23Q16540 153 aaKnown RBP8.93□□□□□ -0.98
SEC13-216ENST00000479868 LINC01620Q4KN68 170 aa8.93□□□□□ -0.98
SEC13-216ENST00000479868 TEN1Q86WV5 123 aa8.93□□□□□ -0.98
SEC13-216ENST00000479868 CLEC2BQ92478 149 aa8.93□□□□□ -0.98
SEC13-216ENST00000479868 C11orf68Q9H3H3 251 aaKnown RBP8.93□□□□□ -0.98
SEC13-216ENST00000479868 ANGP03950 147 aaKnown RBP8.93□□□□□ -0.98
SEC13-216ENST00000479868 C3orf56Q8N813 242 aa8.93□□□□□ -0.98
SEC13-216ENST00000479868 COX6CP09669 75 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 ANKRD29Q8N6D5 301 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 CARD19Q96LW7 228 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 IGLV10-54A0A075B6I4 117 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 LINC00158P58513 81 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 REG3AQ06141 175 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 EGFEM1PQ0D2K5 195 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 C6orf226Q5I0X4 101 aa8.92□□□□□ -0.98
SEC13-216ENST00000479868 PPDPFQ9H3Y8 114 aa8.91□□□□□ -0.98
SEC13-216ENST00000479868 TENM3Q9P273 2699 aa8.91□□□□□ -0.98
SEC13-216ENST00000479868 PFN2P35080 140 aa8.91□□□□□ -0.98
SEC13-216ENST00000479868 IBA57-AS1B1ANH7 110 aa8.9□□□□□ -0.98
SEC13-216ENST00000479868 CHCHD10Q8WYQ3 142 aaPredicted RBP8.9□□□□□ -0.98
SEC13-216ENST00000479868 LELP1Q5T871 98 aa8.9□□□□□ -0.99
SEC13-216ENST00000479868 CD164L2Q6UWJ8 174 aa8.9□□□□□ -0.99
SEC13-216ENST00000479868 C2orf82Q6UX34 121 aa8.9□□□□□ -0.99
SEC13-216ENST00000479868 Q8IZM0 81 aa8.9□□□□□ -0.99
SEC13-216ENST00000479868 PPDPFLQ8WWR9 84 aa8.9□□□□□ -0.99
SEC13-216ENST00000479868 LST1O00453 97 aa8.89□□□□□ -0.99
SEC13-216ENST00000479868 M0QXV9 152 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 CCL18P55774 89 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 SND1-IT1Q9HBX3 110 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 IGKV2-28A0A075B6P5 120 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 TRBV10-2A0A0K0K1G8 114 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 GAGE12HA6NDE8 117 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 IGKV2D-28P01615 120 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 LINC01561Q8N1V8 128 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 DNAH3Q8TD57 4116 aa8.88□□□□□ -0.99
SEC13-216ENST00000479868 COX7A2LO14548 114 aa8.87□□□□□ -0.99
SEC13-216ENST00000479868 LINC00337Q8N6G1 96 aa8.87□□□□□ -0.99
SEC13-216ENST00000479868 COL6A5A8TX70 2615 aa8.87□□□□□ -0.99
SEC13-216ENST00000479868 NOTCH1P46531 2555 aa8.87□□□□□ -0.99
SEC13-216ENST00000479868 KIAA0087Q14695 138 aa8.87□□□□□ -0.99
SEC13-216ENST00000479868 SPATA25Q9BR10 227 aa8.87□□□□□ -0.99
SEC13-216ENST00000479868 LYPD5Q6UWN5 251 aa8.86□□□□□ -0.99
SEC13-216ENST00000479868 CYSRT1A8MQ03 144 aa8.86□□□□□ -0.99
SEC13-216ENST00000479868 Q6ZTC4 211 aa8.86□□□□□ -0.99
SEC13-216ENST00000479868 SMIM20Q8N5G0 67 aa8.86□□□□□ -0.99
SEC13-216ENST00000479868 LINC01600Q96MT4 127 aa8.86□□□□□ -0.99
SEC13-216ENST00000479868 C5orf47Q569G3 176 aa8.85□□□□□ -0.99
SEC13-216ENST00000479868 NTN5Q8WTR8 489 aaPredicted RBP8.85□□□□□ -0.99
SEC13-216ENST00000479868 KLK12Q9UKR0 248 aa8.85□□□□□ -0.99
SEC13-216ENST00000479868 TRAV13-2A0A0B4J235 113 aa8.85□□□□□ -0.99
SEC13-216ENST00000479868 CRPP02741 224 aa8.85□□□□□ -0.99
SEC13-216ENST00000479868 MALP21145 153 aa8.85□□□□□ -0.99
SEC13-216ENST00000479868 BAHCC1Q9P281 2608 aa8.84□□□□□ -0.99
SEC13-216ENST00000479868 KPRPQ5T749 579 aaPredicted RBP8.84□□□□□ -0.99
SEC13-216ENST00000479868 PRR34Q9NV39 138 aa8.84□□□□□ -0.99
SEC13-216ENST00000479868 TEX49A0A1B0GTD5 131 aa8.83□□□□□ -1
SEC13-216ENST00000479868 ENHOQ6UWT2 76 aa8.83□□□□□ -1
SEC13-216ENST00000479868 A0A0J9YWU9 116 aa8.82□□□□□ -1
SEC13-216ENST00000479868 H3BT86 120 aa8.82□□□□□ -1
SEC13-216ENST00000479868 CDIP1Q9H305 208 aa8.82□□□□□ -1
SEC13-216ENST00000479868 RPL28P46779 137 aaKnown RBP8.81□□□□□ -1
SEC13-216ENST00000479868 FAM218AQ96MZ4 157 aa8.81□□□□□ -1
SEC13-216ENST00000479868 NBEAL1Q6ZS30 2694 aa8.81□□□□□ -1
SEC13-216ENST00000479868 H3BNG1 76 aa8.81□□□□□ -1
SEC13-216ENST00000479868 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
SEC13-216ENST00000479868 CXCL5P42830 114 aa8.8□□□□□ -1
SEC13-216ENST00000479868 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
SEC13-216ENST00000479868 SMIM11BQ8TCY0 68 aa8.8□□□□□ -1
SEC13-216ENST00000479868 NANOS2P60321 138 aaKnown RBP8.8□□□□□ -1
SEC13-216ENST00000479868 C6orf223Q8N319 242 aa8.79□□□□□ -1
SEC13-216ENST00000479868 UBE2WQ96B02 151 aa8.79□□□□□ -1
SEC13-216ENST00000479868 LINC00526Q96FQ7 95 aa8.79□□□□□ -1
SEC13-216ENST00000479868 KLK5Q9Y337 293 aaPredicted RBP8.79□□□□□ -1
SEC13-216ENST00000479868 TRAV8-4A0A0B4J246 113 aa8.78□□□□□ -1
SEC13-216ENST00000479868 PRB2P02812 416 aaPredicted RBP8.78□□□□□ -1
SEC13-216ENST00000479868 COX17Q14061 63 aa8.78□□□□□ -1
SEC13-216ENST00000479868 C10orf25Q5T742 122 aa8.78□□□□□ -1
SEC13-216ENST00000479868 SPAG11BQ08648 103 aa8.78□□□□□ -1
SEC13-216ENST00000479868 TRACP01848 142 aa8.77□□□□□ -1.01
SEC13-216ENST00000479868 UNQ6190/PRO20217Q6UXQ8 127 aa8.77□□□□□ -1.01
SEC13-216ENST00000479868 OR13C6PQ8NH95 151 aa8.77□□□□□ -1.01
SEC13-216ENST00000479868 PRR3P79522 188 aaKnown RBP8.77□□□□□ -1.01
SEC13-216ENST00000479868 ESRGQ1W209 222 aa8.77□□□□□ -1.01
SEC13-216ENST00000479868 C11orf45Q8TAV5 145 aa8.77□□□□□ -1.01
SEC13-216ENST00000479868 DEFB131BA0A096LNP1 70 aa8.76□□□□□ -1.01
SEC13-216ENST00000479868 B5MCH6 92 aa8.75□□□□□ -1.01
SEC13-216ENST00000479868 XGP55808 180 aa8.75□□□□□ -1.01
SEC13-216ENST00000479868 Q9HAA7 133 aa8.75□□□□□ -1.01
SEC13-216ENST00000479868 A0A087WYN8 130 aa8.74□□□□□ -1.01
SEC13-216ENST00000479868 Q8NDZ9 215 aa8.74□□□□□ -1.01
SEC13-216ENST00000479868 ZNF561-AS1K7EIQ3 104 aa8.73□□□□□ -1.01
SEC13-216ENST00000479868 MT-ATP8P03928 68 aa8.73□□□□□ -1.01
SEC13-216ENST00000479868 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
SEC13-216ENST00000479868 NDUFC2O95298 119 aa8.72□□□□□ -1.01
SEC13-216ENST00000479868 C22orf24Q9Y442 160 aa8.72□□□□□ -1.01
SEC13-216ENST00000479868 DEFB121Q5J5C9 76 aa8.72□□□□□ -1.01
SEC13-216ENST00000479868 KRTAP26-1Q6PEX3 210 aa8.72□□□□□ -1.01
SEC13-216ENST00000479868 H0YGX0 51 aa8.71□□□□□ -1.01
SEC13-216ENST00000479868 SEC61GP60059 68 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms