RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TRBV20-1A0A075B6N2 111 aa10.52□□□□□ -0.73
RPUSD3-215ENST00000475470 GAGE12HA6NDE8 117 aa10.52□□□□□ -0.73
RPUSD3-215ENST00000475470 LINC01561Q8N1V8 128 aa10.52□□□□□ -0.73
RPUSD3-215ENST00000475470 C11orf45Q8TAV5 145 aa10.51□□□□□ -0.73
RPUSD3-215ENST00000475470 TCL1BO95988 128 aa10.5□□□□□ -0.73
RPUSD3-215ENST00000475470 NANOS2P60321 138 aaKnown RBP10.5□□□□□ -0.73
RPUSD3-215ENST00000475470 SOSTDC1Q6X4U4 206 aa10.5□□□□□ -0.73
RPUSD3-215ENST00000475470 COX7A2LO14548 114 aa10.5□□□□□ -0.73
RPUSD3-215ENST00000475470 ANK2Q01484 3957 aa10.5□□□□□ -0.73
RPUSD3-215ENST00000475470 LINC00158P58513 81 aa10.49□□□□□ -0.73
RPUSD3-215ENST00000475470 Q8IZM0 81 aa10.49□□□□□ -0.73
RPUSD3-215ENST00000475470 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
RPUSD3-215ENST00000475470 SVIPQ8NHG7 77 aa10.49□□□□□ -0.73
RPUSD3-215ENST00000475470 KLK12Q9UKR0 248 aa10.49□□□□□ -0.73
RPUSD3-215ENST00000475470 MALP21145 153 aa10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 RPL13AP40429 203 aaKnown RBP10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 MIR7-3HGQ8N6C7 128 aa10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 DEFB121Q5J5C9 76 aa10.48□□□□□ -0.73
RPUSD3-215ENST00000475470 SPATA25Q9BR10 227 aa10.47□□□□□ -0.73
RPUSD3-215ENST00000475470 DNAH3Q8TD57 4116 aa10.47□□□□□ -0.73
RPUSD3-215ENST00000475470 TRIAP1O43715 76 aa10.47□□□□□ -0.73
RPUSD3-215ENST00000475470 PFN2P35080 140 aa10.47□□□□□ -0.73
RPUSD3-215ENST00000475470 PPDPFQ9H3Y8 114 aa10.47□□□□□ -0.73
RPUSD3-215ENST00000475470 FOXI1Q12951 378 aa10.46□□□□□ -0.73
RPUSD3-215ENST00000475470 PRR34Q9NV39 138 aa10.46□□□□□ -0.73
RPUSD3-215ENST00000475470 K7EIL1 84 aa10.46□□□□□ -0.74
RPUSD3-215ENST00000475470 CKS1BP61024 79 aa10.46□□□□□ -0.74
RPUSD3-215ENST00000475470 MRAPQ8TCY5 172 aa10.46□□□□□ -0.74
RPUSD3-215ENST00000475470 CFAP161Q6P656 301 aa10.45□□□□□ -0.74
RPUSD3-215ENST00000475470 COX6CP09669 75 aa10.45□□□□□ -0.74
RPUSD3-215ENST00000475470 C2orf82Q6UX34 121 aa10.45□□□□□ -0.74
RPUSD3-215ENST00000475470 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
RPUSD3-215ENST00000475470 WFDC10BQ8IUB3 73 aa10.44□□□□□ -0.74
RPUSD3-215ENST00000475470 CRPP02741 224 aa10.44□□□□□ -0.74
RPUSD3-215ENST00000475470 TM2D3Q9BRN9 247 aa10.44□□□□□ -0.74
RPUSD3-215ENST00000475470 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
RPUSD3-215ENST00000475470 KIAA0087Q14695 138 aa10.43□□□□□ -0.74
RPUSD3-215ENST00000475470 ATXN8Q156A1 80 aa10.43□□□□□ -0.74
RPUSD3-215ENST00000475470 ESRGQ1W209 222 aa10.43□□□□□ -0.74
RPUSD3-215ENST00000475470 SND1-IT1Q9HBX3 110 aa10.43□□□□□ -0.74
RPUSD3-215ENST00000475470 TENM3Q9P273 2699 aa10.43□□□□□ -0.74
RPUSD3-215ENST00000475470 CXCL5P42830 114 aa10.42□□□□□ -0.74
RPUSD3-215ENST00000475470 UBE2WQ96B02 151 aa10.42□□□□□ -0.74
RPUSD3-215ENST00000475470 CARD19Q96LW7 228 aa10.42□□□□□ -0.74
RPUSD3-215ENST00000475470 CCL18P55774 89 aa10.41□□□□□ -0.74
RPUSD3-215ENST00000475470 TRAV8-4A0A0B4J246 113 aa10.4□□□□□ -0.74
RPUSD3-215ENST00000475470 KLK5Q9Y337 293 aaPredicted RBP10.4□□□□□ -0.74
RPUSD3-215ENST00000475470 TEN1Q86WV5 123 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 TRAV13-2A0A0B4J235 113 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 TRAV10A0A0B4J240 114 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 C9JAW5 83 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 PPDPFLQ8WWR9 84 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 MDFIQ99750 246 aa10.39□□□□□ -0.75
RPUSD3-215ENST00000475470 CDIP1Q9H305 208 aa10.38□□□□□ -0.75
RPUSD3-215ENST00000475470 SPAG11BQ08648 103 aa10.38□□□□□ -0.75
RPUSD3-215ENST00000475470 LINC01620Q4KN68 170 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 IGKV2-28A0A075B6P5 120 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 SLC25A20O43772 301 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 IGKV2D-28P01615 120 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 SCGB1A1P11684 91 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 COX17Q14061 63 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
RPUSD3-215ENST00000475470 NBEAL1Q6ZS30 2694 aa10.36□□□□□ -0.75
RPUSD3-215ENST00000475470 LINC00337Q8N6G1 96 aa10.35□□□□□ -0.75
RPUSD3-215ENST00000475470 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
RPUSD3-215ENST00000475470 C9orf116Q5BN46 136 aaPredicted RBP10.34□□□□□ -0.75
RPUSD3-215ENST00000475470 LINC01556Q5JQF7 62 aa10.34□□□□□ -0.75
RPUSD3-215ENST00000475470 C15orf53Q8NAA6 179 aa10.34□□□□□ -0.75
RPUSD3-215ENST00000475470 LST1O00453 97 aa10.34□□□□□ -0.75
RPUSD3-215ENST00000475470 UNQ6190/PRO20217Q6UXQ8 127 aa10.34□□□□□ -0.75
RPUSD3-215ENST00000475470 LINC00526Q96FQ7 95 aa10.34□□□□□ -0.75
RPUSD3-215ENST00000475470 MT-ATP8P03928 68 aa10.33□□□□□ -0.76
RPUSD3-215ENST00000475470 TRBV10-2A0A0K0K1G8 114 aa10.32□□□□□ -0.76
RPUSD3-215ENST00000475470 C10orf25Q5T742 122 aa10.32□□□□□ -0.76
RPUSD3-215ENST00000475470 M0QXV9 152 aa10.32□□□□□ -0.76
RPUSD3-215ENST00000475470 XGP55808 180 aa10.32□□□□□ -0.76
RPUSD3-215ENST00000475470 RPL28P46779 137 aaKnown RBP10.31□□□□□ -0.76
RPUSD3-215ENST00000475470 OR13C6PQ8NH95 151 aa10.31□□□□□ -0.76
RPUSD3-215ENST00000475470 KRTAP26-1Q6PEX3 210 aa10.3□□□□□ -0.76
RPUSD3-215ENST00000475470 NTN5Q8WTR8 489 aaPredicted RBP10.3□□□□□ -0.76
RPUSD3-215ENST00000475470 C1orf43Q9BWL3 253 aa10.3□□□□□ -0.76
RPUSD3-215ENST00000475470 MGAM2Q2M2H8 2515 aa10.3□□□□□ -0.76
RPUSD3-215ENST00000475470 SMIM11BQ8TCY0 68 aa10.29□□□□□ -0.76
RPUSD3-215ENST00000475470 ZNF561-AS1K7EIQ3 104 aa10.28□□□□□ -0.76
RPUSD3-215ENST00000475470 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
RPUSD3-215ENST00000475470 LINC00588Q9Y4M8 146 aa10.28□□□□□ -0.76
RPUSD3-215ENST00000475470 IGKV2D-24A0A075B6R9 120 aa10.27□□□□□ -0.76
RPUSD3-215ENST00000475470 HIGD2BQ4VC39 106 aa10.27□□□□□ -0.76
RPUSD3-215ENST00000475470 MUC7Q8TAX7 377 aa10.27□□□□□ -0.76
RPUSD3-215ENST00000475470 NDUFC2O95298 119 aa10.27□□□□□ -0.77
RPUSD3-215ENST00000475470 LINC01600Q96MT4 127 aa10.27□□□□□ -0.77
RPUSD3-215ENST00000475470 GVQW2A0A096LPI5 108 aaPredicted RBP10.26□□□□□ -0.77
RPUSD3-215ENST00000475470 H3BT86 120 aa10.26□□□□□ -0.77
RPUSD3-215ENST00000475470 TEX49A0A1B0GTD5 131 aa10.26□□□□□ -0.77
RPUSD3-215ENST00000475470 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
RPUSD3-215ENST00000475470 A0A1B0GV72 72 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms