RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 RNF151Q2KHN1 245 aa13.34□□□□□ -0.27
FAM3A-215ENST00000447601 ATXN8Q156A1 80 aa13.33□□□□□ -0.28
FAM3A-215ENST00000447601 IGLV10-54A0A075B6I4 117 aa13.32□□□□□ -0.28
FAM3A-215ENST00000447601 ETDBQ3ZM63 59 aa13.32□□□□□ -0.28
FAM3A-215ENST00000447601 MALP21145 153 aa13.32□□□□□ -0.28
FAM3A-215ENST00000447601 PRR34Q9NV39 138 aa13.32□□□□□ -0.28
FAM3A-215ENST00000447601 CXCL5P42830 114 aa13.3□□□□□ -0.28
FAM3A-215ENST00000447601 SMCPP49901 116 aaPredicted RBP13.3□□□□□ -0.28
FAM3A-215ENST00000447601 FOXI1Q12951 378 aa13.3□□□□□ -0.28
FAM3A-215ENST00000447601 C11orf45Q8TAV5 145 aa13.3□□□□□ -0.28
FAM3A-215ENST00000447601 CMYA5Q8N3K9 4069 aa13.3□□□□□ -0.28
FAM3A-215ENST00000447601 CKS1BP61024 79 aa13.29□□□□□ -0.28
FAM3A-215ENST00000447601 KLK12Q9UKR0 248 aa13.29□□□□□ -0.28
FAM3A-215ENST00000447601 PFN2P35080 140 aa13.29□□□□□ -0.28
FAM3A-215ENST00000447601 CFAP161Q6P656 301 aa13.29□□□□□ -0.28
FAM3A-215ENST00000447601 NANOS2P60321 138 aaKnown RBP13.28□□□□□ -0.28
FAM3A-215ENST00000447601 VPS25Q9BRG1 176 aa13.28□□□□□ -0.28
FAM3A-215ENST00000447601 CBY1Q9Y3M2 126 aa13.28□□□□□ -0.28
FAM3A-215ENST00000447601 J3QR89 54 aa13.27□□□□□ -0.28
FAM3A-215ENST00000447601 KIAA0087Q14695 138 aa13.27□□□□□ -0.28
FAM3A-215ENST00000447601 SPATA25Q9BR10 227 aa13.27□□□□□ -0.28
FAM3A-215ENST00000447601 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.28
FAM3A-215ENST00000447601 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
FAM3A-215ENST00000447601 TRAV13-2A0A0B4J235 113 aa13.27□□□□□ -0.29
FAM3A-215ENST00000447601 GAGE12HA6NDE8 117 aa13.26□□□□□ -0.29
FAM3A-215ENST00000447601 C2orf82Q6UX34 121 aa13.26□□□□□ -0.29
FAM3A-215ENST00000447601 DNAH3Q8TD57 4116 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 C9JAW5 83 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 M0QXV9 152 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 CRPP02741 224 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 ENHOQ6UWT2 76 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 SLC25A20O43772 301 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 CCL18P55774 89 aa13.25□□□□□ -0.29
FAM3A-215ENST00000447601 KLK5Q9Y337 293 aaPredicted RBP13.25□□□□□ -0.29
FAM3A-215ENST00000447601 TRAV8-4A0A0B4J246 113 aa13.24□□□□□ -0.29
FAM3A-215ENST00000447601 PKD1L1Q8TDX9 2849 aa13.23□□□□□ -0.29
FAM3A-215ENST00000447601 WFDC10BQ8IUB3 73 aa13.23□□□□□ -0.29
FAM3A-215ENST00000447601 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
FAM3A-215ENST00000447601 COX17Q14061 63 aa13.23□□□□□ -0.29
FAM3A-215ENST00000447601 TEN1Q86WV5 123 aa13.23□□□□□ -0.29
FAM3A-215ENST00000447601 TM2D3Q9BRN9 247 aa13.23□□□□□ -0.29
FAM3A-215ENST00000447601 ANK2Q01484 3957 aa13.22□□□□□ -0.29
FAM3A-215ENST00000447601 LST1O00453 97 aa13.22□□□□□ -0.29
FAM3A-215ENST00000447601 UBE2WQ96B02 151 aa13.22□□□□□ -0.29
FAM3A-215ENST00000447601 K7EIL1 84 aa13.21□□□□□ -0.29
FAM3A-215ENST00000447601 CLEC2BQ92478 149 aa13.21□□□□□ -0.29
FAM3A-215ENST00000447601 IGKV2-28A0A075B6P5 120 aa13.2□□□□□ -0.3
FAM3A-215ENST00000447601 IGKV2D-28P01615 120 aa13.2□□□□□ -0.3
FAM3A-215ENST00000447601 SPAG11BQ08648 103 aa13.2□□□□□ -0.3
FAM3A-215ENST00000447601 ESRGQ1W209 222 aa13.2□□□□□ -0.3
FAM3A-215ENST00000447601 COL6A5A8TX70 2615 aa13.2□□□□□ -0.3
FAM3A-215ENST00000447601 TRBV10-2A0A0K0K1G8 114 aa13.2□□□□□ -0.3
FAM3A-215ENST00000447601 DEFB121Q5J5C9 76 aa13.19□□□□□ -0.3
FAM3A-215ENST00000447601 ANKRD29Q8N6D5 301 aa13.19□□□□□ -0.3
FAM3A-215ENST00000447601 LINC00337Q8N6G1 96 aa13.19□□□□□ -0.3
FAM3A-215ENST00000447601 LINC01600Q96MT4 127 aa13.18□□□□□ -0.3
FAM3A-215ENST00000447601 TRAV10A0A0B4J240 114 aa13.18□□□□□ -0.3
FAM3A-215ENST00000447601 PPDPFLQ8WWR9 84 aa13.18□□□□□ -0.3
FAM3A-215ENST00000447601 RPL28P46779 137 aaKnown RBP13.17□□□□□ -0.3
FAM3A-215ENST00000447601 MRAPQ8TCY5 172 aa13.16□□□□□ -0.3
FAM3A-215ENST00000447601 H3BT86 120 aa13.15□□□□□ -0.3
FAM3A-215ENST00000447601 LINC01556Q5JQF7 62 aa13.15□□□□□ -0.3
FAM3A-215ENST00000447601 C15orf53Q8NAA6 179 aa13.15□□□□□ -0.3
FAM3A-215ENST00000447601 MUC7Q8TAX7 377 aa13.15□□□□□ -0.3
FAM3A-215ENST00000447601 UNQ6190/PRO20217Q6UXQ8 127 aa13.12□□□□□ -0.31
FAM3A-215ENST00000447601 C6orf223Q8N319 242 aa13.12□□□□□ -0.31
FAM3A-215ENST00000447601 CARD19Q96LW7 228 aa13.12□□□□□ -0.31
FAM3A-215ENST00000447601 NDUFC2O95298 119 aa13.11□□□□□ -0.31
FAM3A-215ENST00000447601 C9orf116Q5BN46 136 aaPredicted RBP13.11□□□□□ -0.31
FAM3A-215ENST00000447601 SMIM11BQ8TCY0 68 aa13.11□□□□□ -0.31
FAM3A-215ENST00000447601 TENM3Q9P273 2699 aa13.1□□□□□ -0.31
FAM3A-215ENST00000447601 GVQW2A0A096LPI5 108 aaPredicted RBP13.1□□□□□ -0.31
FAM3A-215ENST00000447601 TRACP01848 142 aa13.1□□□□□ -0.31
FAM3A-215ENST00000447601 C10orf25Q5T742 122 aa13.1□□□□□ -0.31
FAM3A-215ENST00000447601 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
FAM3A-215ENST00000447601 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
FAM3A-215ENST00000447601 NTN5Q8WTR8 489 aaPredicted RBP13.09□□□□□ -0.31
FAM3A-215ENST00000447601 NOTCH1P46531 2555 aa13.09□□□□□ -0.31
FAM3A-215ENST00000447601 LINC00526Q96FQ7 95 aa13.08□□□□□ -0.32
FAM3A-215ENST00000447601 C1orf43Q9BWL3 253 aa13.08□□□□□ -0.32
FAM3A-215ENST00000447601 DNAH10OSP0CZ25 163 aa13.07□□□□□ -0.32
FAM3A-215ENST00000447601 H0YGX0 51 aa13.06□□□□□ -0.32
FAM3A-215ENST00000447601 ZNF561-AS1K7EIQ3 104 aa13.06□□□□□ -0.32
FAM3A-215ENST00000447601 MDFIQ99750 246 aa13.06□□□□□ -0.32
FAM3A-215ENST00000447601 FAM218AQ96MZ4 157 aa13.04□□□□□ -0.32
FAM3A-215ENST00000447601 C6orf48Q9UBA6 75 aa13.03□□□□□ -0.32
FAM3A-215ENST00000447601 HIGD2BQ4VC39 106 aa13.02□□□□□ -0.32
FAM3A-215ENST00000447601 TMEM126AQ9H061 195 aa13.02□□□□□ -0.32
FAM3A-215ENST00000447601 LINC00588Q9Y4M8 146 aa13.02□□□□□ -0.32
FAM3A-215ENST00000447601 IGKV2D-24A0A075B6R9 120 aa13.02□□□□□ -0.33
FAM3A-215ENST00000447601 TEX49A0A1B0GTD5 131 aa13.02□□□□□ -0.33
FAM3A-215ENST00000447601 CAMK2N2Q96S95 79 aa13.02□□□□□ -0.33
FAM3A-215ENST00000447601 NBEAL1Q6ZS30 2694 aa13.01□□□□□ -0.33
FAM3A-215ENST00000447601 PRR3P79522 188 aaKnown RBP13.01□□□□□ -0.33
FAM3A-215ENST00000447601 C15orf56Q8N910 161 aa13.01□□□□□ -0.33
FAM3A-215ENST00000447601 C2orf48Q96LS8 159 aa13□□□□□ -0.33
FAM3A-215ENST00000447601 F8WDY8 70 aa12.99□□□□□ -0.33
FAM3A-215ENST00000447601 NCR3O14931 201 aa12.97□□□□□ -0.33
FAM3A-215ENST00000447601 DNAL4O96015 105 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms