RNA–Protein interactions for RNA: ENST00000442241.8

NLE1-202, Transcript of notchless homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLE1, Length 2,588 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-202ENST00000442241 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
NLE1-202ENST00000442241 DEFB135Q30KP9 77 aa11.24□□□□□ -0.61
NLE1-202ENST00000442241 Q8N3U1 123 aa11.23□□□□□ -0.61
NLE1-202ENST00000442241 X6R8D5 127 aa11.23□□□□□ -0.61
NLE1-202ENST00000442241 C3orf22Q8N5N4 141 aa11.22□□□□□ -0.61
NLE1-202ENST00000442241 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
NLE1-202ENST00000442241 FAM222AQ5U5X8 452 aa11.21□□□□□ -0.61
NLE1-202ENST00000442241 FAM19A3Q7Z5A8 133 aa11.21□□□□□ -0.61
NLE1-202ENST00000442241 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
NLE1-202ENST00000442241 PPDPFQ9H3Y8 114 aa11.21□□□□□ -0.61
NLE1-202ENST00000442241 PFN2P35080 140 aa11.21□□□□□ -0.62
NLE1-202ENST00000442241 XCL1P47992 114 aa11.21□□□□□ -0.62
NLE1-202ENST00000442241 C22orf24Q9Y442 160 aa11.21□□□□□ -0.62
NLE1-202ENST00000442241 TRACP01848 142 aa11.2□□□□□ -0.62
NLE1-202ENST00000442241 ATP5G1P05496 136 aa11.2□□□□□ -0.62
NLE1-202ENST00000442241 MIR7-3HGQ8N6C7 128 aa11.2□□□□□ -0.62
NLE1-202ENST00000442241 UQCRQO14949 82 aa11.2□□□□□ -0.62
NLE1-202ENST00000442241 C9orf153Q5TBE3 101 aa11.19□□□□□ -0.62
NLE1-202ENST00000442241 LINC00526Q96FQ7 95 aa11.19□□□□□ -0.62
NLE1-202ENST00000442241 LINC00158P58513 81 aa11.19□□□□□ -0.62
NLE1-202ENST00000442241 CXCL5P42830 114 aa11.18□□□□□ -0.62
NLE1-202ENST00000442241 IGHV3OR16-9A0A0B4J2B5 98 aa11.17□□□□□ -0.62
NLE1-202ENST00000442241 IGLV10-54A0A075B6I4 117 aa11.16□□□□□ -0.62
NLE1-202ENST00000442241 LINC00959A0A1B0GUT2 108 aa11.16□□□□□ -0.62
NLE1-202ENST00000442241 HTN3P15516 51 aa11.16□□□□□ -0.62
NLE1-202ENST00000442241 BAALC-AS2P0C853 105 aa11.16□□□□□ -0.62
NLE1-202ENST00000442241 COPS9Q8WXC6 57 aa11.16□□□□□ -0.62
NLE1-202ENST00000442241 FAM218AQ96MZ4 157 aa11.15□□□□□ -0.63
NLE1-202ENST00000442241 CELA1Q9UNI1 258 aa11.15□□□□□ -0.63
NLE1-202ENST00000442241 KIR2DL5BQ8NHK3 375 aa11.14□□□□□ -0.63
NLE1-202ENST00000442241 PAX4O43316 350 aa11.14□□□□□ -0.63
NLE1-202ENST00000442241 HIST1H4AP62805 103 aaKnown RBP11.14□□□□□ -0.63
NLE1-202ENST00000442241 LINC00337Q8N6G1 96 aa11.14□□□□□ -0.63
NLE1-202ENST00000442241 C2orf48Q96LS8 159 aa11.13□□□□□ -0.63
NLE1-202ENST00000442241 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
NLE1-202ENST00000442241 IGKV2-28A0A075B6P5 120 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 IGHV4-28A0A0C4DH34 117 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 IGKV2D-28P01615 120 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 INAFM2P0DMQ5 153 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 COX7CP15954 63 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 Q9HAA7 133 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 PRO0255Q9UI72 69 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 PKD1L1Q8TDX9 2849 aa11.12□□□□□ -0.63
NLE1-202ENST00000442241 C6orf226Q5I0X4 101 aa11.11□□□□□ -0.63
NLE1-202ENST00000442241 LINC00269Q8N2A0 174 aa11.11□□□□□ -0.63
NLE1-202ENST00000442241 A0A087WZ39 114 aa11.11□□□□□ -0.63
NLE1-202ENST00000442241 CCL18P55774 89 aa11.11□□□□□ -0.63
NLE1-202ENST00000442241 C9orf66Q5T8R8 295 aa11.11□□□□□ -0.63
NLE1-202ENST00000442241 LINC00612Q8N6U2 182 aa11.11□□□□□ -0.63
NLE1-202ENST00000442241 A0A1B0GX51 115 aa11.1□□□□□ -0.63
NLE1-202ENST00000442241 CRYGAP11844 174 aa11.1□□□□□ -0.63
NLE1-202ENST00000442241 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
NLE1-202ENST00000442241 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
NLE1-202ENST00000442241 CRPP02741 224 aa11.08□□□□□ -0.64
NLE1-202ENST00000442241 PRR3P79522 188 aaKnown RBP11.08□□□□□ -0.64
NLE1-202ENST00000442241 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
NLE1-202ENST00000442241 ANGP03950 147 aaKnown RBP11.08□□□□□ -0.64
NLE1-202ENST00000442241 MALP21145 153 aa11.08□□□□□ -0.64
NLE1-202ENST00000442241 DAD1P61803 113 aa11.08□□□□□ -0.64
NLE1-202ENST00000442241 RPL28P46779 137 aaKnown RBP11.07□□□□□ -0.64
NLE1-202ENST00000442241 OR13C6PQ8NH95 151 aa11.07□□□□□ -0.64
NLE1-202ENST00000442241 J3KT08 172 aa11.07□□□□□ -0.64
NLE1-202ENST00000442241 ATOX1O00244 68 aa11.07□□□□□ -0.64
NLE1-202ENST00000442241 SS18Q15532 418 aa11.07□□□□□ -0.64
NLE1-202ENST00000442241 C9orf116Q5BN46 136 aaPredicted RBP11.06□□□□□ -0.64
NLE1-202ENST00000442241 SMIM11BQ8TCY0 68 aa11.06□□□□□ -0.64
NLE1-202ENST00000442241 ANK2Q01484 3957 aa11.04□□□□□ -0.64
NLE1-202ENST00000442241 A0A087WYN8 130 aa11.04□□□□□ -0.64
NLE1-202ENST00000442241 TRAV13-2A0A0B4J235 113 aa11.04□□□□□ -0.64
NLE1-202ENST00000442241 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
NLE1-202ENST00000442241 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
NLE1-202ENST00000442241 RPS28P62857 69 aaKnown RBP11.03□□□□□ -0.64
NLE1-202ENST00000442241 OBSCN-AS1Q96MR7 158 aa11.03□□□□□ -0.64
NLE1-202ENST00000442241 RETNQ9HD89 108 aa11.03□□□□□ -0.64
NLE1-202ENST00000442241 LYRM9A8MSI8 78 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 IGHV4-30-4P0DP06 118 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 Q8NAQ8 132 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 CHCHD10Q8WYQ3 142 aaPredicted RBP11.02□□□□□ -0.65
NLE1-202ENST00000442241 F8P00451 2351 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 IBA57-AS1B1ANH7 110 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 APOC4P55056 127 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 RPL18AQ02543 176 aaKnown RBP11.02□□□□□ -0.65
NLE1-202ENST00000442241 C9orf129Q5T035 196 aaKnown RBP11.02□□□□□ -0.65
NLE1-202ENST00000442241 CYSTM1Q9H1C7 97 aa11.02□□□□□ -0.65
NLE1-202ENST00000442241 A0A1B0GUV1 79 aa11.01□□□□□ -0.65
NLE1-202ENST00000442241 OXLD1Q5BKU9 147 aa11.01□□□□□ -0.65
NLE1-202ENST00000442241 FAM19A5Q7Z5A7 132 aaPredicted RBP11.01□□□□□ -0.65
NLE1-202ENST00000442241 DNAL4O96015 105 aa11.01□□□□□ -0.65
NLE1-202ENST00000442241 SLPIP03973 132 aa11.01□□□□□ -0.65
NLE1-202ENST00000442241 REG3AQ06141 175 aa11.01□□□□□ -0.65
NLE1-202ENST00000442241 STAB1Q9NY15 2570 aa11□□□□□ -0.65
NLE1-202ENST00000442241 hADV29S1A0JD25 119 aa11□□□□□ -0.65
NLE1-202ENST00000442241 C6orf223Q8N319 242 aa11□□□□□ -0.65
NLE1-202ENST00000442241 Q6JHZ5 121 aa11□□□□□ -0.65
NLE1-202ENST00000442241 FBN1P35555 2871 aaKnown RBP11□□□□□ -0.65
NLE1-202ENST00000442241 C14orf132Q9NPU4 83 aa10.99□□□□□ -0.65
NLE1-202ENST00000442241 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
NLE1-202ENST00000442241 LINC00846Q9NV44 126 aa10.98□□□□□ -0.65
NLE1-202ENST00000442241 TENM3Q9P273 2699 aa10.97□□□□□ -0.65
NLE1-202ENST00000442241 UPK3BQ9BT76 320 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms