RNA–Protein interactions for RNA: ENST00000440093.6

SOX9-AS1-205, SOX9 antisense RNA 1, humanhuman

TSL 3

Gene SOX9-AS1, Length 468 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-205ENST00000440093 SNHG12Q9BXW3 62 aa3.54□□□□□ -1.84
SOX9-AS1-205ENST00000440093 TRAV8-6A0A0B4J262 113 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 IGHV1-58A0A0C4DH39 117 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 A0A0J9YXV3 536 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 A6NDN8 102 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 ZNF815PA8K554 130 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 C16orf90A8MZG2 172 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 J3QQQ9 107 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 LGALS3P17931 250 aaKnown RBP3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 LELP1Q5T871 98 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 SFTA2Q6UW10 78 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 LINC01561Q8N1V8 128 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 LINC00469Q8N7U9 141 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 C11orf45Q8TAV5 145 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 DEFB104AQ8WTQ1 72 aa3.53□□□□□ -1.84
SOX9-AS1-205ENST00000440093 TNXBP22105 4242 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 A0A096LPF7 62 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGLV5-39A0A0G2JS06 123 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGLL5B9A064 214 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGHV3-30-3P0DP02 117 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 GCSHP23434 173 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 GAGE6Q13070 117 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 MPV17L2Q567V2 206 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 BVES-AS1Q5T3Y7 98 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 Q6ZVH6 145 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 C15orf53Q8NAA6 179 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TM2D2Q9BX73 214 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SPANXB1Q9NS25 103 aaPredicted RBP3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TP73-AS1Q9UF72 201 aa3.52□□□□□ -1.85
SOX9-AS1-205ENST00000440093 DEFB131BA0A096LNP1 70 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TRAV10A0A0B4J240 114 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TRAV13-1A0A0B4J241 112 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 A0A0J9YY99 117 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TMEM238C9JI98 176 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TIMM17BO60830 172 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 HTN3P15516 51 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 HINT1P49773 126 aaPredicted RBP3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 RBX1P62877 108 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SS18Q15532 418 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SCGB1D4Q6XE38 83 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 Q6ZTC4 211 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 ORAOV1Q8WV07 137 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 COPS9Q8WXC6 57 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 PPDPFQ9H3Y8 114 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 CDKN2A-AS1Q9UH64 79 aa3.51□□□□□ -1.85
SOX9-AS1-205ENST00000440093 MUC2Q02817 5179 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGLV4-60A0A075B6I1 120 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 A0A087WZ39 114 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGHV3OR16-9A0A0B4J2B5 98 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 LINC00959A0A1B0GUT2 108 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SMIM1B2RUZ4 78 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TMEM262E9PQX1 116 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 NDUFA1O15239 70 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 HERV-K104P63124 156 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 BATFQ16520 125 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 RNASE13Q5GAN3 156 aaKnown RBP3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 LYPD5Q6UWN5 251 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 CEND1Q8N111 149 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 HIST1H4GQ99525 98 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 NDUFA12Q9UI09 145 aa3.5□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TRAV8-4A0A0B4J246 113 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 K7EP13 123 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 INAFM2P0DMQ5 153 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TCTAP57738 103 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TSPEAR-AS2P59090 65 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SRSF9Q13242 221 aaKnown RBP eCLIP3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 CIRBPQ14011 172 aaKnown RBP3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 CD164L2Q6UWJ8 174 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 Q6ZR54 194 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TTTY13Q9BZ97 58 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 PRR34Q9NV39 138 aa3.49□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TRAV8-3A0A0A6YYJ7 113 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 A0A1B0GWB2 263 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 ANGP03950 147 aaKnown RBP3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SPINK8P0C7L1 97 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IFITM1P13164 125 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 CXCL5P42830 114 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 PTTG1IPP53801 180 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 RPL24P83731 157 aaKnown RBP3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 COX6A2Q02221 97 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 REG3AQ06141 175 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 MIAQ16674 131 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 RNF151Q2KHN1 245 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 LINC01556Q5JQF7 62 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 C10orf126Q8N4M7 172 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SPANXDQ9BXN6 97 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SPANXCQ9NY87 97 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 COX11Q9Y6N1 276 aa3.48□□□□□ -1.85
SOX9-AS1-205ENST00000440093 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 EPM2AB3EWF7 344 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 COX7A2LO14548 114 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 APOMO95445 188 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGHV3-30P01768 117 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 CRPP02741 224 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 SMIM13P0DJ93 91 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 IGHV3-30-5P0DP03 117 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 Q8IZM0 81 aa3.47□□□□□ -1.85
SOX9-AS1-205ENST00000440093 LINC00269Q8N2A0 174 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms