RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 LYRM9A8MSI8 78 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 SLC25A20O43772 301 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 GAGE7O76087 117 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 GAGE12FP0CL80 117 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 GAGE12GP0CL81 117 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 GAGE12IP0CL82 117 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 RPL13AP40429 203 aaKnown RBP5.22□□□□□ -1.57
COL17A1-204ENST00000433822 COX6A2Q02221 97 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 GAGE4Q13068 117 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 GAGE5Q13069 117 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 LINC01620Q4KN68 170 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 RNASE13Q5GAN3 156 aaKnown RBP5.22□□□□□ -1.57
COL17A1-204ENST00000433822 ADAMTSL4-AS1Q5T5F5 129 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 SH2D6Q7Z4S9 175 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.22□□□□□ -1.57
COL17A1-204ENST00000433822 SIGMAR1Q99720 223 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 ICOSQ9Y6W8 199 aa5.22□□□□□ -1.57
COL17A1-204ENST00000433822 PRSS2P07478 247 aa5.21□□□□□ -1.58
COL17A1-204ENST00000433822 RPL35AP18077 110 aaKnown RBP5.21□□□□□ -1.58
COL17A1-204ENST00000433822 ANKRD29Q8N6D5 301 aa5.21□□□□□ -1.58
COL17A1-204ENST00000433822 LINC00308Q8TCZ7 52 aa5.21□□□□□ -1.58
COL17A1-204ENST00000433822 Q9H8V8 135 aa5.21□□□□□ -1.58
COL17A1-204ENST00000433822 A0A087WZ39 114 aa5.2□□□□□ -1.58
COL17A1-204ENST00000433822 IGHV3OR16-9A0A0B4J2B5 98 aa5.2□□□□□ -1.58
COL17A1-204ENST00000433822 LST1O00453 97 aa5.2□□□□□ -1.58
COL17A1-204ENST00000433822 TRIAP1O43715 76 aa5.2□□□□□ -1.58
COL17A1-204ENST00000433822 Q1RN00 199 aa5.2□□□□□ -1.58
COL17A1-204ENST00000433822 CARD19Q96LW7 228 aa5.2□□□□□ -1.58
COL17A1-204ENST00000433822 TRAV13-1A0A0B4J241 112 aa5.19□□□□□ -1.58
COL17A1-204ENST00000433822 IBA57-AS1B1ANH7 110 aa5.19□□□□□ -1.58
COL17A1-204ENST00000433822 WFDC10AQ9H1F0 79 aa5.19□□□□□ -1.58
COL17A1-204ENST00000433822 PRO0255Q9UI72 69 aa5.19□□□□□ -1.58
COL17A1-204ENST00000433822 TRAV13-2A0A0B4J235 113 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 FAM240AA0A1B0GVK7 77 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 C9JAW5 83 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 COX7A2LO14548 114 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 APOC4P55056 127 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 KRTAP10-3P60369 221 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 DEFB121Q5J5C9 76 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 MEIG1Q5JSS6 88 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 MUC7Q8TAX7 377 aa5.18□□□□□ -1.58
COL17A1-204ENST00000433822 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
COL17A1-204ENST00000433822 A8MZ25 164 aa5.17□□□□□ -1.58
COL17A1-204ENST00000433822 TRACP01848 142 aa5.17□□□□□ -1.58
COL17A1-204ENST00000433822 MIFP14174 115 aa5.17□□□□□ -1.58
COL17A1-204ENST00000433822 MRPL23Q16540 153 aaKnown RBP5.17□□□□□ -1.58
COL17A1-204ENST00000433822 WFDC9Q8NEX5 89 aa5.17□□□□□ -1.58
COL17A1-204ENST00000433822 COX7B2Q8TF08 81 aa5.17□□□□□ -1.58
COL17A1-204ENST00000433822 LOC100131303A0A0U1RQF7 123 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 LINC00959A0A1B0GUT2 108 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 CXCL5P42830 114 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 SOSTDC1Q6X4U4 206 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 Q8IZM0 81 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 MTURNQ8N3F0 131 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 CITED1Q99966 193 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 CHCHD5Q9BSY4 110 aa5.16□□□□□ -1.58
COL17A1-204ENST00000433822 IGLV4-60A0A075B6I1 120 aa5.15□□□□□ -1.59
COL17A1-204ENST00000433822 RPL28P46779 137 aaKnown RBP5.15□□□□□ -1.59
COL17A1-204ENST00000433822 GAGE6Q13070 117 aa5.15□□□□□ -1.59
COL17A1-204ENST00000433822 SS18Q15532 418 aa5.15□□□□□ -1.59
COL17A1-204ENST00000433822 UBE2WQ96B02 151 aa5.15□□□□□ -1.59
COL17A1-204ENST00000433822 H7C2G1 150 aa5.14□□□□□ -1.59
COL17A1-204ENST00000433822 GYPEP15421 78 aa5.14□□□□□ -1.59
COL17A1-204ENST00000433822 COX17Q14061 63 aa5.14□□□□□ -1.59
COL17A1-204ENST00000433822 C21orf62-AS1Q17RA5 79 aa5.14□□□□□ -1.59
COL17A1-204ENST00000433822 Q6Q795 121 aa5.14□□□□□ -1.59
COL17A1-204ENST00000433822 C2orf82Q6UX34 121 aa5.14□□□□□ -1.59
COL17A1-204ENST00000433822 IGHV4-28A0A0C4DH34 117 aa5.13□□□□□ -1.59
COL17A1-204ENST00000433822 H0YGX0 51 aa5.13□□□□□ -1.59
COL17A1-204ENST00000433822 CRPP02741 224 aa5.13□□□□□ -1.59
COL17A1-204ENST00000433822 ACYP1P07311 99 aa5.13□□□□□ -1.59
COL17A1-204ENST00000433822 Q8NAQ8 132 aa5.13□□□□□ -1.59
COL17A1-204ENST00000433822 NTN5Q8WTR8 489 aaPredicted RBP5.13□□□□□ -1.59
COL17A1-204ENST00000433822 NOTCH3Q9UM47 2321 aa5.13□□□□□ -1.59
COL17A1-204ENST00000433822 A0A1B0GV72 72 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 H3BNG1 76 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 NDUFC2O95298 119 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 ATP5G1P05496 136 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 DEFB130BP0DP73 79 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 DEFB130AP0DP74 79 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 CD164L2Q6UWJ8 174 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 MIR7-3HGQ8N6C7 128 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 DAND5Q8N907 189 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 SND1-IT1Q9HBX3 110 aa5.12□□□□□ -1.59
COL17A1-204ENST00000433822 A0A1B0GX51 115 aa5.11□□□□□ -1.59
COL17A1-204ENST00000433822 SPART-AS1P0CW21 52 aa5.11□□□□□ -1.59
COL17A1-204ENST00000433822 DAD1P61803 113 aa5.11□□□□□ -1.59
COL17A1-204ENST00000433822 LELP1Q5T871 98 aa5.11□□□□□ -1.59
COL17A1-204ENST00000433822 TENM3Q9P273 2699 aa5.11□□□□□ -1.59
COL17A1-204ENST00000433822 IGKV2-28A0A075B6P5 120 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 TRAV8-4A0A0B4J246 113 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 IGKV2D-28P01615 120 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 CCL18P55774 89 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 XGP55808 180 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 LINC00158P58513 81 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 NPC2P61916 151 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 C6orf226Q5I0X4 101 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 CLEC2BQ92478 149 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 RYR2Q92736 4967 aa5.1□□□□□ -1.59
COL17A1-204ENST00000433822 INAFM2P0DMQ5 153 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms