RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 MIR7-3HGQ8N6C7 128 aa13.53□□□□□ -0.24
CASC4-203ENST00000429162 LINC00158P58513 81 aa13.52□□□□□ -0.24
CASC4-203ENST00000429162 COX6CP09669 75 aa13.52□□□□□ -0.25
CASC4-203ENST00000429162 RNF151Q2KHN1 245 aa13.52□□□□□ -0.25
CASC4-203ENST00000429162 IGLV10-54A0A075B6I4 117 aa13.51□□□□□ -0.25
CASC4-203ENST00000429162 ATXN8Q156A1 80 aa13.51□□□□□ -0.25
CASC4-203ENST00000429162 MALP21145 153 aa13.5□□□□□ -0.25
CASC4-203ENST00000429162 CXCL5P42830 114 aa13.49□□□□□ -0.25
CASC4-203ENST00000429162 SMCPP49901 116 aaPredicted RBP13.49□□□□□ -0.25
CASC4-203ENST00000429162 ETDBQ3ZM63 59 aa13.49□□□□□ -0.25
CASC4-203ENST00000429162 C11orf45Q8TAV5 145 aa13.49□□□□□ -0.25
CASC4-203ENST00000429162 PRR34Q9NV39 138 aa13.49□□□□□ -0.25
CASC4-203ENST00000429162 FOXI1Q12951 378 aa13.49□□□□□ -0.25
CASC4-203ENST00000429162 CFAP161Q6P656 301 aa13.49□□□□□ -0.25
CASC4-203ENST00000429162 CKS1BP61024 79 aa13.48□□□□□ -0.25
CASC4-203ENST00000429162 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
CASC4-203ENST00000429162 NANOS2P60321 138 aaKnown RBP13.47□□□□□ -0.25
CASC4-203ENST00000429162 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
CASC4-203ENST00000429162 PFN2P35080 140 aa13.47□□□□□ -0.25
CASC4-203ENST00000429162 VPS25Q9BRG1 176 aa13.46□□□□□ -0.25
CASC4-203ENST00000429162 SND1-IT1Q9HBX3 110 aa13.46□□□□□ -0.25
CASC4-203ENST00000429162 CBY1Q9Y3M2 126 aa13.46□□□□□ -0.25
CASC4-203ENST00000429162 DEFB131BA0A096LNP1 70 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 GAGE12HA6NDE8 117 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 J3QR89 54 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 CRPP02741 224 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 KIAA0087Q14695 138 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 PKD1L1Q8TDX9 2849 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 TRAV13-2A0A0B4J235 113 aa13.45□□□□□ -0.26
CASC4-203ENST00000429162 C9JAW5 83 aa13.44□□□□□ -0.26
CASC4-203ENST00000429162 CCL18P55774 89 aa13.44□□□□□ -0.26
CASC4-203ENST00000429162 LINC01620Q4KN68 170 aa13.44□□□□□ -0.26
CASC4-203ENST00000429162 M0QXV9 152 aa13.43□□□□□ -0.26
CASC4-203ENST00000429162 ENHOQ6UWT2 76 aa13.43□□□□□ -0.26
CASC4-203ENST00000429162 C2orf82Q6UX34 121 aa13.43□□□□□ -0.26
CASC4-203ENST00000429162 TRAV8-4A0A0B4J246 113 aa13.43□□□□□ -0.26
CASC4-203ENST00000429162 SLC25A20O43772 301 aa13.43□□□□□ -0.26
CASC4-203ENST00000429162 WFDC10BQ8IUB3 73 aa13.43□□□□□ -0.26
CASC4-203ENST00000429162 TM2D3Q9BRN9 247 aa13.42□□□□□ -0.26
CASC4-203ENST00000429162 KLK5Q9Y337 293 aaPredicted RBP13.42□□□□□ -0.26
CASC4-203ENST00000429162 K7EIL1 84 aa13.41□□□□□ -0.26
CASC4-203ENST00000429162 PRB2P02812 416 aaPredicted RBP13.41□□□□□ -0.26
CASC4-203ENST00000429162 TEN1Q86WV5 123 aa13.41□□□□□ -0.26
CASC4-203ENST00000429162 ANK2Q01484 3957 aa13.41□□□□□ -0.26
CASC4-203ENST00000429162 LST1O00453 97 aa13.41□□□□□ -0.26
CASC4-203ENST00000429162 COX17Q14061 63 aa13.41□□□□□ -0.26
CASC4-203ENST00000429162 UBE2WQ96B02 151 aa13.41□□□□□ -0.26
CASC4-203ENST00000429162 SPAG11BQ08648 103 aa13.4□□□□□ -0.26
CASC4-203ENST00000429162 CLEC2BQ92478 149 aa13.39□□□□□ -0.27
CASC4-203ENST00000429162 IGKV2-28A0A075B6P5 120 aa13.39□□□□□ -0.27
CASC4-203ENST00000429162 IGKV2D-28P01615 120 aa13.39□□□□□ -0.27
CASC4-203ENST00000429162 ESRGQ1W209 222 aa13.39□□□□□ -0.27
CASC4-203ENST00000429162 TRBV10-2A0A0K0K1G8 114 aa13.38□□□□□ -0.27
CASC4-203ENST00000429162 TRAV10A0A0B4J240 114 aa13.37□□□□□ -0.27
CASC4-203ENST00000429162 LINC00337Q8N6G1 96 aa13.37□□□□□ -0.27
CASC4-203ENST00000429162 ANKRD29Q8N6D5 301 aa13.37□□□□□ -0.27
CASC4-203ENST00000429162 LINC01600Q96MT4 127 aa13.37□□□□□ -0.27
CASC4-203ENST00000429162 DEFB121Q5J5C9 76 aa13.36□□□□□ -0.27
CASC4-203ENST00000429162 PPDPFLQ8WWR9 84 aa13.36□□□□□ -0.27
CASC4-203ENST00000429162 COL6A5A8TX70 2615 aa13.36□□□□□ -0.27
CASC4-203ENST00000429162 RPL28P46779 137 aaKnown RBP13.35□□□□□ -0.27
CASC4-203ENST00000429162 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
CASC4-203ENST00000429162 H3BT86 120 aa13.33□□□□□ -0.28
CASC4-203ENST00000429162 LINC01556Q5JQF7 62 aa13.33□□□□□ -0.28
CASC4-203ENST00000429162 C15orf53Q8NAA6 179 aa13.33□□□□□ -0.28
CASC4-203ENST00000429162 MUC7Q8TAX7 377 aa13.33□□□□□ -0.28
CASC4-203ENST00000429162 TENM3Q9P273 2699 aa13.32□□□□□ -0.28
CASC4-203ENST00000429162 C6orf223Q8N319 242 aa13.31□□□□□ -0.28
CASC4-203ENST00000429162 NDUFC2O95298 119 aa13.3□□□□□ -0.28
CASC4-203ENST00000429162 CARD19Q96LW7 228 aa13.3□□□□□ -0.28
CASC4-203ENST00000429162 C9orf116Q5BN46 136 aaPredicted RBP13.29□□□□□ -0.28
CASC4-203ENST00000429162 UNQ6190/PRO20217Q6UXQ8 127 aa13.29□□□□□ -0.28
CASC4-203ENST00000429162 SMIM11BQ8TCY0 68 aa13.29□□□□□ -0.28
CASC4-203ENST00000429162 GVQW2A0A096LPI5 108 aaPredicted RBP13.28□□□□□ -0.28
CASC4-203ENST00000429162 TRACP01848 142 aa13.28□□□□□ -0.28
CASC4-203ENST00000429162 C10orf25Q5T742 122 aa13.28□□□□□ -0.28
CASC4-203ENST00000429162 KRTAP26-1Q6PEX3 210 aa13.28□□□□□ -0.28
CASC4-203ENST00000429162 OR13C6PQ8NH95 151 aa13.28□□□□□ -0.28
CASC4-203ENST00000429162 NTN5Q8WTR8 489 aaPredicted RBP13.27□□□□□ -0.28
CASC4-203ENST00000429162 LINC00526Q96FQ7 95 aa13.27□□□□□ -0.29
CASC4-203ENST00000429162 C1orf43Q9BWL3 253 aa13.27□□□□□ -0.29
CASC4-203ENST00000429162 DNAH10OSP0CZ25 163 aa13.26□□□□□ -0.29
CASC4-203ENST00000429162 NOTCH1P46531 2555 aa13.26□□□□□ -0.29
CASC4-203ENST00000429162 ZNF561-AS1K7EIQ3 104 aa13.24□□□□□ -0.29
CASC4-203ENST00000429162 H0YGX0 51 aa13.23□□□□□ -0.29
CASC4-203ENST00000429162 MDFIQ99750 246 aa13.23□□□□□ -0.29
CASC4-203ENST00000429162 FAM218AQ96MZ4 157 aa13.22□□□□□ -0.29
CASC4-203ENST00000429162 C6orf48Q9UBA6 75 aa13.22□□□□□ -0.29
CASC4-203ENST00000429162 HUWE1Q7Z6Z7 4374 aaKnown RBP13.21□□□□□ -0.29
CASC4-203ENST00000429162 IGKV2D-24A0A075B6R9 120 aa13.21□□□□□ -0.3
CASC4-203ENST00000429162 HIGD2BQ4VC39 106 aa13.21□□□□□ -0.3
CASC4-203ENST00000429162 CAMK2N2Q96S95 79 aa13.21□□□□□ -0.3
CASC4-203ENST00000429162 LINC00588Q9Y4M8 146 aa13.21□□□□□ -0.3
CASC4-203ENST00000429162 C15orf56Q8N910 161 aa13.2□□□□□ -0.3
CASC4-203ENST00000429162 NBEAL1Q6ZS30 2694 aa13.2□□□□□ -0.3
CASC4-203ENST00000429162 C2orf48Q96LS8 159 aa13.19□□□□□ -0.3
CASC4-203ENST00000429162 TMEM126AQ9H061 195 aa13.19□□□□□ -0.3
CASC4-203ENST00000429162 TEX49A0A1B0GTD5 131 aa13.18□□□□□ -0.3
CASC4-203ENST00000429162 PRR3P79522 188 aaKnown RBP13.18□□□□□ -0.3
CASC4-203ENST00000429162 F8WDY8 70 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms