RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 PRR34Q9NV39 138 aa13.21□□□□□ -0.3
LIMS2-204ENST00000409286 SPATA25Q9BR10 227 aa13.2□□□□□ -0.3
LIMS2-204ENST00000409286 LINC00158P58513 81 aa13.19□□□□□ -0.3
LIMS2-204ENST00000409286 RPL13AP40429 203 aaKnown RBP13.18□□□□□ -0.3
LIMS2-204ENST00000409286 NANOS2P60321 138 aaKnown RBP13.18□□□□□ -0.3
LIMS2-204ENST00000409286 MIR7-3HGQ8N6C7 128 aa13.18□□□□□ -0.3
LIMS2-204ENST00000409286 TRIAP1O43715 76 aa13.18□□□□□ -0.3
LIMS2-204ENST00000409286 FOXI1Q12951 378 aa13.18□□□□□ -0.3
LIMS2-204ENST00000409286 IGLV10-54A0A075B6I4 117 aa13.17□□□□□ -0.3
LIMS2-204ENST00000409286 DEFB131BA0A096LNP1 70 aa13.17□□□□□ -0.3
LIMS2-204ENST00000409286 COX6CP09669 75 aa13.17□□□□□ -0.3
LIMS2-204ENST00000409286 MALP21145 153 aa13.17□□□□□ -0.3
LIMS2-204ENST00000409286 KLK12Q9UKR0 248 aa13.17□□□□□ -0.3
LIMS2-204ENST00000409286 K7EIL1 84 aa13.16□□□□□ -0.3
LIMS2-204ENST00000409286 CXCL5P42830 114 aa13.16□□□□□ -0.3
LIMS2-204ENST00000409286 KIAA0087Q14695 138 aa13.16□□□□□ -0.3
LIMS2-204ENST00000409286 TM2D3Q9BRN9 247 aa13.16□□□□□ -0.3
LIMS2-204ENST00000409286 CKS1BP61024 79 aa13.15□□□□□ -0.31
LIMS2-204ENST00000409286 ATXN8Q156A1 80 aa13.15□□□□□ -0.31
LIMS2-204ENST00000409286 CFAP161Q6P656 301 aa13.15□□□□□ -0.31
LIMS2-204ENST00000409286 ENHOQ6UWT2 76 aa13.15□□□□□ -0.31
LIMS2-204ENST00000409286 KLK5Q9Y337 293 aaPredicted RBP13.15□□□□□ -0.31
LIMS2-204ENST00000409286 TRAV8-4A0A0B4J246 113 aa13.14□□□□□ -0.31
LIMS2-204ENST00000409286 GAGE12HA6NDE8 117 aa13.14□□□□□ -0.31
LIMS2-204ENST00000409286 PRB2P02812 416 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-204ENST00000409286 SMCPP49901 116 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-204ENST00000409286 MTURNQ8N3F0 131 aa13.12□□□□□ -0.31
LIMS2-204ENST00000409286 TRAV13-2A0A0B4J235 113 aa13.12□□□□□ -0.31
LIMS2-204ENST00000409286 PFN2P35080 140 aa13.12□□□□□ -0.31
LIMS2-204ENST00000409286 ESRGQ1W209 222 aa13.12□□□□□ -0.31
LIMS2-204ENST00000409286 DEFB121Q5J5C9 76 aa13.12□□□□□ -0.31
LIMS2-204ENST00000409286 SND1-IT1Q9HBX3 110 aa13.12□□□□□ -0.31
LIMS2-204ENST00000409286 CRPP02741 224 aa13.11□□□□□ -0.31
LIMS2-204ENST00000409286 CCL18P55774 89 aa13.11□□□□□ -0.31
LIMS2-204ENST00000409286 ETDBQ3ZM63 59 aa13.11□□□□□ -0.31
LIMS2-204ENST00000409286 C2orf82Q6UX34 121 aa13.11□□□□□ -0.31
LIMS2-204ENST00000409286 WFDC10BQ8IUB3 73 aa13.11□□□□□ -0.31
LIMS2-204ENST00000409286 COX17Q14061 63 aa13.1□□□□□ -0.31
LIMS2-204ENST00000409286 NOTCH1P46531 2555 aa13.1□□□□□ -0.31
LIMS2-204ENST00000409286 TRAV10A0A0B4J240 114 aa13.09□□□□□ -0.31
LIMS2-204ENST00000409286 M0QXV9 152 aa13.09□□□□□ -0.31
LIMS2-204ENST00000409286 UBE2WQ96B02 151 aa13.08□□□□□ -0.31
LIMS2-204ENST00000409286 TENM3Q9P273 2699 aa13.08□□□□□ -0.32
LIMS2-204ENST00000409286 RNF151Q2KHN1 245 aa13.08□□□□□ -0.32
LIMS2-204ENST00000409286 LINC01620Q4KN68 170 aa13.07□□□□□ -0.32
LIMS2-204ENST00000409286 MRAPQ8TCY5 172 aa13.06□□□□□ -0.32
LIMS2-204ENST00000409286 IGKV2-28A0A075B6P5 120 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 C9JAW5 83 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 J3QR89 54 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 SLC25A20O43772 301 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 IGKV2D-28P01615 120 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 SPAG11BQ08648 103 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 C15orf53Q8NAA6 179 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 MDFIQ99750 246 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 LST1O00453 97 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 LINC01556Q5JQF7 62 aa13.05□□□□□ -0.32
LIMS2-204ENST00000409286 NBEAL1Q6ZS30 2694 aa13.04□□□□□ -0.32
LIMS2-204ENST00000409286 LINC00337Q8N6G1 96 aa13.04□□□□□ -0.32
LIMS2-204ENST00000409286 HUWE1Q7Z6Z7 4374 aaKnown RBP13.03□□□□□ -0.32
LIMS2-204ENST00000409286 MUC7Q8TAX7 377 aa13.03□□□□□ -0.32
LIMS2-204ENST00000409286 CBY1Q9Y3M2 126 aa13.03□□□□□ -0.32
LIMS2-204ENST00000409286 TRBV10-2A0A0K0K1G8 114 aa13.02□□□□□ -0.32
LIMS2-204ENST00000409286 TEN1Q86WV5 123 aa13.02□□□□□ -0.32
LIMS2-204ENST00000409286 VPS25Q9BRG1 176 aa13.02□□□□□ -0.32
LIMS2-204ENST00000409286 RPL28P46779 137 aaKnown RBP13.02□□□□□ -0.33
LIMS2-204ENST00000409286 CLEC2BQ92478 149 aa13.02□□□□□ -0.33
LIMS2-204ENST00000409286 KRTAP26-1Q6PEX3 210 aa13.01□□□□□ -0.33
LIMS2-204ENST00000409286 ANKRD29Q8N6D5 301 aa13□□□□□ -0.33
LIMS2-204ENST00000409286 GVQW2A0A096LPI5 108 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-204ENST00000409286 UNQ6190/PRO20217Q6UXQ8 127 aa12.99□□□□□ -0.33
LIMS2-204ENST00000409286 C6orf223Q8N319 242 aa12.99□□□□□ -0.33
LIMS2-204ENST00000409286 MGAM2Q2M2H8 2515 aa12.99□□□□□ -0.33
LIMS2-204ENST00000409286 NDUFC2O95298 119 aa12.99□□□□□ -0.33
LIMS2-204ENST00000409286 NTN5Q8WTR8 489 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-204ENST00000409286 PPDPFLQ8WWR9 84 aa12.99□□□□□ -0.33
LIMS2-204ENST00000409286 DNAH10OSP0CZ25 163 aa12.98□□□□□ -0.33
LIMS2-204ENST00000409286 C9orf116Q5BN46 136 aaPredicted RBP12.97□□□□□ -0.33
LIMS2-204ENST00000409286 C10orf25Q5T742 122 aa12.97□□□□□ -0.33
LIMS2-204ENST00000409286 H3BT86 120 aa12.96□□□□□ -0.33
LIMS2-204ENST00000409286 SMIM11BQ8TCY0 68 aa12.95□□□□□ -0.34
LIMS2-204ENST00000409286 CARD19Q96LW7 228 aa12.95□□□□□ -0.34
LIMS2-204ENST00000409286 C1orf43Q9BWL3 253 aa12.95□□□□□ -0.34
LIMS2-204ENST00000409286 TRACP01848 142 aa12.94□□□□□ -0.34
LIMS2-204ENST00000409286 LINC00526Q96FQ7 95 aa12.94□□□□□ -0.34
LIMS2-204ENST00000409286 OR13C6PQ8NH95 151 aa12.93□□□□□ -0.34
LIMS2-204ENST00000409286 LINC00588Q9Y4M8 146 aa12.93□□□□□ -0.34
LIMS2-204ENST00000409286 ZNF561-AS1K7EIQ3 104 aa12.93□□□□□ -0.34
LIMS2-204ENST00000409286 H0YGX0 51 aa12.92□□□□□ -0.34
LIMS2-204ENST00000409286 C2orf48Q96LS8 159 aa12.91□□□□□ -0.34
LIMS2-204ENST00000409286 F8WDY8 70 aa12.9□□□□□ -0.34
LIMS2-204ENST00000409286 C6orf48Q9UBA6 75 aa12.9□□□□□ -0.34
LIMS2-204ENST00000409286 IGKV2D-24A0A075B6R9 120 aa12.89□□□□□ -0.35
LIMS2-204ENST00000409286 C15orf56Q8N910 161 aa12.89□□□□□ -0.35
LIMS2-204ENST00000409286 HIGD2BQ4VC39 106 aa12.88□□□□□ -0.35
LIMS2-204ENST00000409286 FAM218AQ96MZ4 157 aa12.88□□□□□ -0.35
LIMS2-204ENST00000409286 CAMK2N2Q96S95 79 aa12.88□□□□□ -0.35
LIMS2-204ENST00000409286 B9D2Q9BPU9 175 aa12.87□□□□□ -0.35
LIMS2-204ENST00000409286 UPK3BQ9BT76 320 aa12.87□□□□□ -0.35
LIMS2-204ENST00000409286 TMEM126AQ9H061 195 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms