RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 LINC01006Q8NI28 216 aa7.88□□□□□ -1.15
HPS4-202ENST00000398145 RANBP2P49792 3224 aaKnown RBP7.88□□□□□ -1.15
HPS4-202ENST00000398145 MIFP14174 115 aa7.88□□□□□ -1.15
HPS4-202ENST00000398145 M0R378 163 aa7.87□□□□□ -1.15
HPS4-202ENST00000398145 UNQ6190/PRO20217Q6UXQ8 127 aa7.87□□□□□ -1.15
HPS4-202ENST00000398145 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
HPS4-202ENST00000398145 C9orf116Q5BN46 136 aaPredicted RBP7.87□□□□□ -1.15
HPS4-202ENST00000398145 CHD9Q3L8U1 2897 aa7.87□□□□□ -1.15
HPS4-202ENST00000398145 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
HPS4-202ENST00000398145 LELP1Q5T871 98 aa7.86□□□□□ -1.15
HPS4-202ENST00000398145 CRYGAP11844 174 aa7.86□□□□□ -1.15
HPS4-202ENST00000398145 SYCNQ0VAF6 134 aa7.86□□□□□ -1.15
HPS4-202ENST00000398145 C11orf72Q8NBR9 251 aa7.86□□□□□ -1.15
HPS4-202ENST00000398145 FHL3Q13643 280 aa7.86□□□□□ -1.15
HPS4-202ENST00000398145 Q8N3U1 123 aa7.85□□□□□ -1.15
HPS4-202ENST00000398145 ZNF462Q96JM2 2506 aa7.85□□□□□ -1.15
HPS4-202ENST00000398145 FHL2Q14192 279 aa7.85□□□□□ -1.15
HPS4-202ENST00000398145 KLK9Q2XQG4 91 aa7.85□□□□□ -1.15
HPS4-202ENST00000398145 SOSTDC1Q6X4U4 206 aa7.85□□□□□ -1.15
HPS4-202ENST00000398145 Q9UF83 564 aa7.85□□□□□ -1.15
HPS4-202ENST00000398145 HIGD2AQ9BW72 106 aa7.84□□□□□ -1.15
HPS4-202ENST00000398145 CFAP54Q96N23 3096 aa7.84□□□□□ -1.15
HPS4-202ENST00000398145 IGKV2-28A0A075B6P5 120 aa7.84□□□□□ -1.16
HPS4-202ENST00000398145 IGKV2D-28P01615 120 aa7.84□□□□□ -1.16
HPS4-202ENST00000398145 IGHV3OR16-9A0A0B4J2B5 98 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 TRBV10-3A0A0K0K1G6 114 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 KIR2DL5BQ8NHK3 375 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 HILS1P60008 231 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 FAM218AQ96MZ4 157 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 LITAFQ99732 161 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 UBE2AP49459 152 aa7.83□□□□□ -1.16
HPS4-202ENST00000398145 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
HPS4-202ENST00000398145 H0Y9J4 135 aa7.82□□□□□ -1.16
HPS4-202ENST00000398145 IGLV1-51P01701 117 aa7.81□□□□□ -1.16
HPS4-202ENST00000398145 Q6ZVQ6 151 aa7.81□□□□□ -1.16
HPS4-202ENST00000398145 ZNF843Q8N446 348 aa7.81□□□□□ -1.16
HPS4-202ENST00000398145 DHRS4-AS1Q9P1J3 65 aa7.81□□□□□ -1.16
HPS4-202ENST00000398145 ACANP16112 2415 aa7.81□□□□□ -1.16
HPS4-202ENST00000398145 IGKV2-24A0A0C4DH68 120 aa7.81□□□□□ -1.16
HPS4-202ENST00000398145 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
HPS4-202ENST00000398145 LINC00575Q6W349 94 aa7.8□□□□□ -1.16
HPS4-202ENST00000398145 ANKRD17O75179 2603 aaKnown RBP7.8□□□□□ -1.16
HPS4-202ENST00000398145 C11orf45Q8TAV5 145 aa7.8□□□□□ -1.16
HPS4-202ENST00000398145 V9GYY9 64 aa7.8□□□□□ -1.16
HPS4-202ENST00000398145 COL27A1Q8IZC6 1860 aaPredicted RBP7.79□□□□□ -1.16
HPS4-202ENST00000398145 NHLRC4P0CG21 123 aaPredicted RBP7.79□□□□□ -1.16
HPS4-202ENST00000398145 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
HPS4-202ENST00000398145 LINC01547P58512 204 aaPredicted RBP7.79□□□□□ -1.16
HPS4-202ENST00000398145 EGFEM1PQ0D2K5 195 aa7.79□□□□□ -1.16
HPS4-202ENST00000398145 SPTSSBQ8NFR3 76 aa7.79□□□□□ -1.16
HPS4-202ENST00000398145 CELA1Q9UNI1 258 aa7.78□□□□□ -1.16
HPS4-202ENST00000398145 PRR4Q16378 134 aa7.78□□□□□ -1.16
HPS4-202ENST00000398145 KPRPQ5T749 579 aaPredicted RBP7.78□□□□□ -1.16
HPS4-202ENST00000398145 WFDC10BQ8IUB3 73 aa7.78□□□□□ -1.16
HPS4-202ENST00000398145 LINC01561Q8N1V8 128 aa7.78□□□□□ -1.16
HPS4-202ENST00000398145 A8MTW9 85 aa7.78□□□□□ -1.16
HPS4-202ENST00000398145 A0A096LNI7 61 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 C1orf195Q5TG92 126 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 WFDC13Q8IUB5 93 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 TMEM254Q8TBM7 123 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 CHKB-CPT1BH3BT56 60 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 FAM30AQ9NZY2 134 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 PRYO14603 147 aa7.76□□□□□ -1.17
HPS4-202ENST00000398145 PLA2G2AP14555 144 aa7.75□□□□□ -1.17
HPS4-202ENST00000398145 C6orf223Q8N319 242 aa7.75□□□□□ -1.17
HPS4-202ENST00000398145 CXCL6P80162 114 aa7.74□□□□□ -1.17
HPS4-202ENST00000398145 B9D2Q9BPU9 175 aa7.74□□□□□ -1.17
HPS4-202ENST00000398145 RPL37AP8A6NKH3 93 aa7.74□□□□□ -1.17
HPS4-202ENST00000398145 TRANK1O15050 2925 aa7.74□□□□□ -1.17
HPS4-202ENST00000398145 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.74□□□□□ -1.17
HPS4-202ENST00000398145 EIF4EBP3O60516 100 aaPredicted RBP7.73□□□□□ -1.17
HPS4-202ENST00000398145 C1orf137Q5JT78 98 aa7.73□□□□□ -1.17
HPS4-202ENST00000398145 SMCR5Q8TEV8 140 aa7.73□□□□□ -1.17
HPS4-202ENST00000398145 BCE1O60756 84 aa7.72□□□□□ -1.17
HPS4-202ENST00000398145 IGKV4-1P06312 121 aa7.72□□□□□ -1.17
HPS4-202ENST00000398145 KRTAP10-9P60411 292 aa7.72□□□□□ -1.17
HPS4-202ENST00000398145 LRCOL1A6NCL2 159 aa7.71□□□□□ -1.17
HPS4-202ENST00000398145 MRPL55Q7Z7F7 128 aaKnown RBP7.71□□□□□ -1.17
HPS4-202ENST00000398145 TRBV7-6A0A0J9YX20 115 aa7.7□□□□□ -1.18
HPS4-202ENST00000398145 C14orf177Q52M58 125 aa7.7□□□□□ -1.18
HPS4-202ENST00000398145 SPATA3Q8NHX4 192 aa7.69□□□□□ -1.18
HPS4-202ENST00000398145 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
HPS4-202ENST00000398145 UNC80Q8N2C7 3258 aa7.69□□□□□ -1.18
HPS4-202ENST00000398145 ZNF575Q86XF7 245 aa7.68□□□□□ -1.18
HPS4-202ENST00000398145 C4orf26Q17RF5 130 aa7.68□□□□□ -1.18
HPS4-202ENST00000398145 INAFM1C9JVW0 142 aa7.68□□□□□ -1.18
HPS4-202ENST00000398145 IGHV4-30-4P0DP06 118 aa7.68□□□□□ -1.18
HPS4-202ENST00000398145 Q8N9L7 120 aa7.67□□□□□ -1.18
HPS4-202ENST00000398145 LINC00208Q96KT6 92 aa7.67□□□□□ -1.18
HPS4-202ENST00000398145 A6NED7 52 aa7.67□□□□□ -1.18
HPS4-202ENST00000398145 ESRGQ1W209 222 aa7.67□□□□□ -1.18
HPS4-202ENST00000398145 Q6ZQT0 140 aa7.66□□□□□ -1.18
HPS4-202ENST00000398145 C2orf48Q96LS8 159 aa7.65□□□□□ -1.18
HPS4-202ENST00000398145 A0A0J9YWU9 116 aa7.65□□□□□ -1.18
HPS4-202ENST00000398145 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.65□□□□□ -1.19
HPS4-202ENST00000398145 TRAV10A0A0B4J240 114 aa7.65□□□□□ -1.19
HPS4-202ENST00000398145 C16orf95Q9H693 158 aa7.65□□□□□ -1.19
HPS4-202ENST00000398145 EPG5Q9HCE0 2579 aa7.64□□□□□ -1.19
HPS4-202ENST00000398145 LOC110117498A0A087WWA1 95 aa7.64□□□□□ -1.19
HPS4-202ENST00000398145 F8P00451 2351 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms