RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 IGHV3OR16-9A0A0B4J2B5 98 aa11.19□□□□□ -0.62
CCHCR1-202ENST00000396263 PF4P02776 101 aa11.19□□□□□ -0.62
CCHCR1-202ENST00000396263 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
CCHCR1-202ENST00000396263 KIR2DL5BQ8NHK3 375 aa11.18□□□□□ -0.62
CCHCR1-202ENST00000396263 CYSTM1Q9H1C7 97 aa11.18□□□□□ -0.62
CCHCR1-202ENST00000396263 TRACP01848 142 aa11.17□□□□□ -0.62
CCHCR1-202ENST00000396263 LINC00612Q8N6U2 182 aa11.17□□□□□ -0.62
CCHCR1-202ENST00000396263 C2orf48Q96LS8 159 aa11.17□□□□□ -0.62
CCHCR1-202ENST00000396263 TRAV13-2A0A0B4J235 113 aa11.17□□□□□ -0.62
CCHCR1-202ENST00000396263 A0A087WZ39 114 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 COX7CP15954 63 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 MIR7-3HGQ8N6C7 128 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 IGKV3OR2-268A0A0C4DH90 116 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 A0A1B0GX51 115 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 C5orf38Q86SI9 138 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 TOMM7Q9P0U1 55 aa11.16□□□□□ -0.62
CCHCR1-202ENST00000396263 RPL28P46779 137 aaKnown RBP11.14□□□□□ -0.63
CCHCR1-202ENST00000396263 C22orf24Q9Y442 160 aa11.14□□□□□ -0.63
CCHCR1-202ENST00000396263 TENM1Q9UKZ4 2725 aa11.14□□□□□ -0.63
CCHCR1-202ENST00000396263 ATP5G1P05496 136 aa11.14□□□□□ -0.63
CCHCR1-202ENST00000396263 GAGE2AQ6NT46 116 aa11.14□□□□□ -0.63
CCHCR1-202ENST00000396263 IGKV2-28A0A075B6P5 120 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 hADV29S1A0JD25 119 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 IBA57-AS1B1ANH7 110 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 IGKV2D-28P01615 120 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 CRPP02741 224 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 SND1-IT1Q9HBX3 110 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 CRYGAP11844 174 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 LINC00337Q8N6G1 96 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 LINC00482Q8N8I6 264 aa11.13□□□□□ -0.63
CCHCR1-202ENST00000396263 LINC00959A0A1B0GUT2 108 aa11.12□□□□□ -0.63
CCHCR1-202ENST00000396263 LINC00158P58513 81 aa11.12□□□□□ -0.63
CCHCR1-202ENST00000396263 FAM218AQ96MZ4 157 aa11.12□□□□□ -0.63
CCHCR1-202ENST00000396263 GYPEP15421 78 aa11.11□□□□□ -0.63
CCHCR1-202ENST00000396263 CXCL5P42830 114 aa11.11□□□□□ -0.63
CCHCR1-202ENST00000396263 A0A1B0GUV1 79 aa11.1□□□□□ -0.63
CCHCR1-202ENST00000396263 CCL18P55774 89 aa11.1□□□□□ -0.63
CCHCR1-202ENST00000396263 HIST1H4AP62805 103 aaKnown RBP11.1□□□□□ -0.63
CCHCR1-202ENST00000396263 X6R8D5 127 aa11.1□□□□□ -0.63
CCHCR1-202ENST00000396263 VWFP04275 2813 aa11.1□□□□□ -0.63
CCHCR1-202ENST00000396263 BAALC-AS2P0C853 105 aa11.09□□□□□ -0.63
CCHCR1-202ENST00000396263 ATRQ13535 2644 aa11.09□□□□□ -0.63
CCHCR1-202ENST00000396263 RPS28P62857 69 aaKnown RBP11.08□□□□□ -0.64
CCHCR1-202ENST00000396263 PRO0255Q9UI72 69 aa11.08□□□□□ -0.64
CCHCR1-202ENST00000396263 OXTP01178 125 aa11.07□□□□□ -0.64
CCHCR1-202ENST00000396263 SS18Q15532 418 aa11.07□□□□□ -0.64
CCHCR1-202ENST00000396263 SMIM11BQ8TCY0 68 aa11.07□□□□□ -0.64
CCHCR1-202ENST00000396263 ATOX1O00244 68 aa11.06□□□□□ -0.64
CCHCR1-202ENST00000396263 C6orf226Q5I0X4 101 aa11.06□□□□□ -0.64
CCHCR1-202ENST00000396263 LINC01561Q8N1V8 128 aa11.06□□□□□ -0.64
CCHCR1-202ENST00000396263 OR13C6PQ8NH95 151 aa11.06□□□□□ -0.64
CCHCR1-202ENST00000396263 PFN2P35080 140 aa11.05□□□□□ -0.64
CCHCR1-202ENST00000396263 XCL1P47992 114 aa11.04□□□□□ -0.64
CCHCR1-202ENST00000396263 Q8IZM0 81 aa11.04□□□□□ -0.64
CCHCR1-202ENST00000396263 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
CCHCR1-202ENST00000396263 Q9HAA7 133 aa11.04□□□□□ -0.64
CCHCR1-202ENST00000396263 LYRM9A8MSI8 78 aa11.04□□□□□ -0.64
CCHCR1-202ENST00000396263 H0YGX0 51 aa11.03□□□□□ -0.64
CCHCR1-202ENST00000396263 WIPF1O43516 503 aa11.03□□□□□ -0.64
CCHCR1-202ENST00000396263 SPATA3Q8NHX4 192 aa11.03□□□□□ -0.64
CCHCR1-202ENST00000396263 MALP21145 153 aa11.03□□□□□ -0.64
CCHCR1-202ENST00000396263 DSCR8Q96T75 97 aa11.03□□□□□ -0.64
CCHCR1-202ENST00000396263 TRRAPQ9Y4A5 3859 aa11.02□□□□□ -0.64
CCHCR1-202ENST00000396263 RPL18AQ02543 176 aaKnown RBP11.02□□□□□ -0.64
CCHCR1-202ENST00000396263 INAFM2P0DMQ5 153 aa11.02□□□□□ -0.65
CCHCR1-202ENST00000396263 C9orf129Q5T035 196 aaKnown RBP11.02□□□□□ -0.65
CCHCR1-202ENST00000396263 A0A087WVE0 104 aa11.01□□□□□ -0.65
CCHCR1-202ENST00000396263 A0A087WYN8 130 aa11.01□□□□□ -0.65
CCHCR1-202ENST00000396263 PAX4O43316 350 aa11.01□□□□□ -0.65
CCHCR1-202ENST00000396263 IGKV3D-7A0A0C4DH55 119 aa11.01□□□□□ -0.65
CCHCR1-202ENST00000396263 C9orf66Q5T8R8 295 aa11.01□□□□□ -0.65
CCHCR1-202ENST00000396263 UPK3BQ9BT76 320 aa11.01□□□□□ -0.65
CCHCR1-202ENST00000396263 DNAL4O96015 105 aa11□□□□□ -0.65
CCHCR1-202ENST00000396263 C11orf68Q9H3H3 251 aaKnown RBP11□□□□□ -0.65
CCHCR1-202ENST00000396263 NBEAL2Q6ZNJ1 2754 aa11□□□□□ -0.65
CCHCR1-202ENST00000396263 A0A096LPF7 62 aa11□□□□□ -0.65
CCHCR1-202ENST00000396263 C4orf26Q17RF5 130 aa11□□□□□ -0.65
CCHCR1-202ENST00000396263 CLPSL2Q6UWE3 100 aa11□□□□□ -0.65
CCHCR1-202ENST00000396263 TMEM258P61165 79 aa10.99□□□□□ -0.65
CCHCR1-202ENST00000396263 KRTAP24-1Q3LI83 254 aa10.98□□□□□ -0.65
CCHCR1-202ENST00000396263 CD164L2Q6UWJ8 174 aa10.98□□□□□ -0.65
CCHCR1-202ENST00000396263 FBN1P35555 2871 aaKnown RBP10.98□□□□□ -0.65
CCHCR1-202ENST00000396263 MAST4O15021 2626 aa10.97□□□□□ -0.65
CCHCR1-202ENST00000396263 SERP2Q8N6R1 65 aa10.97□□□□□ -0.65
CCHCR1-202ENST00000396263 C14orf132Q9NPU4 83 aa10.97□□□□□ -0.65
CCHCR1-202ENST00000396263 KIAA0087Q14695 138 aa10.97□□□□□ -0.65
CCHCR1-202ENST00000396263 DEFB135Q30KP9 77 aa10.97□□□□□ -0.65
CCHCR1-202ENST00000396263 LINC00269Q8N2A0 174 aa10.97□□□□□ -0.65
CCHCR1-202ENST00000396263 Q5XG85 94 aa10.96□□□□□ -0.65
CCHCR1-202ENST00000396263 LINC00846Q9NV44 126 aa10.96□□□□□ -0.66
CCHCR1-202ENST00000396263 APOC4P55056 127 aa10.95□□□□□ -0.66
CCHCR1-202ENST00000396263 COX17Q14061 63 aa10.95□□□□□ -0.66
CCHCR1-202ENST00000396263 HRCT1Q6UXD1 115 aa10.95□□□□□ -0.66
CCHCR1-202ENST00000396263 CHCHD10Q8WYQ3 142 aaPredicted RBP10.95□□□□□ -0.66
CCHCR1-202ENST00000396263 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
CCHCR1-202ENST00000396263 IGHV4-28A0A0C4DH34 117 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 130.8 ms