RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TRIAP1O43715 76 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 MEIG1Q5JSS6 88 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 SOSTDC1Q6X4U4 206 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 PRIMA1Q86XR5 153 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 F8P00451 2351 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 ATP6V0E2Q8NHE4 81 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 LINC00308Q8TCZ7 52 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 FAM30AQ9NZY2 134 aa5.54□□□□□ -1.52
PDLIM5-204ENST00000380176 ANK2Q01484 3957 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 CIRBPQ14011 172 aaKnown RBP5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 C4orf26Q17RF5 130 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 PRO0255Q9UI72 69 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 IGHV3OR16-9A0A0B4J2B5 98 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 IGHV4-28A0A0C4DH34 117 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 TRBV30A0A0K0K1B3 111 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 IFITM1P13164 125 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 FOXI1Q12951 378 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 CELA1Q9UNI1 258 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 ICOSQ9Y6W8 199 aa5.53□□□□□ -1.52
PDLIM5-204ENST00000380176 LOC107984640A0A0U1RRK4 108 aa5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 CARD19Q96LW7 228 aa5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 TOMM7Q9P0U1 55 aa5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 RPL13AP40429 203 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 CLPSL2Q6UWE3 100 aa5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 C5orf38Q86SI9 138 aa5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 FLNBO75369 2602 aaKnown RBP5.52□□□□□ -1.53
PDLIM5-204ENST00000380176 LINC00959A0A1B0GUT2 108 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 LYRM9A8MSI8 78 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 PAX4O43316 350 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 Q8N3U1 123 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 SLC25A20O43772 301 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 APOC4P55056 127 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 Q8NAQ8 132 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 WFDC9Q8NEX5 89 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 CLEC2BQ92478 149 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 TEN1Q86WV5 123 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 ANKRD29Q8N6D5 301 aa5.51□□□□□ -1.53
PDLIM5-204ENST00000380176 IGHV4-30-4P0DP06 118 aa5.5□□□□□ -1.53
PDLIM5-204ENST00000380176 ATXN8Q156A1 80 aa5.5□□□□□ -1.53
PDLIM5-204ENST00000380176 PKD1L1Q8TDX9 2849 aa5.5□□□□□ -1.53
PDLIM5-204ENST00000380176 A0A087WZ39 114 aa5.5□□□□□ -1.53
PDLIM5-204ENST00000380176 DAD1P61803 113 aa5.5□□□□□ -1.53
PDLIM5-204ENST00000380176 FAM19A1Q7Z5A9 133 aa5.5□□□□□ -1.53
PDLIM5-204ENST00000380176 FBN1P35555 2871 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 CMYA5Q8N3K9 4069 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 PLA2G1BP04054 148 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 XCL1P47992 114 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 A0A1B0GUV1 79 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 STAB1Q9NY15 2570 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 TTC32Q5I0X7 151 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 C1orf195Q5TG92 126 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 MIR7-3HGQ8N6C7 128 aa5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 C11orf68Q9H3H3 251 aaKnown RBP5.49□□□□□ -1.53
PDLIM5-204ENST00000380176 PKIGQ9Y2B9 76 aa5.48□□□□□ -1.53
PDLIM5-204ENST00000380176 MIFP14174 115 aa5.48□□□□□ -1.53
PDLIM5-204ENST00000380176 HTN3P15516 51 aa5.48□□□□□ -1.53
PDLIM5-204ENST00000380176 PPDPFLQ8WWR9 84 aa5.48□□□□□ -1.53
PDLIM5-204ENST00000380176 COX6CP09669 75 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 GAGE2BQ13066 116 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 GAGE2EQ4V326 116 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 Q5XG85 94 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 LINC00269Q8N2A0 174 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 GAGE2DQ9UEU5 116 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 ATP5G1P05496 136 aa5.47□□□□□ -1.53
PDLIM5-204ENST00000380176 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 TRBV10-2A0A0K0K1G8 114 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 LST1O00453 97 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 PFN2P35080 140 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 LINC00158P58513 81 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 KRTAP10-11P60412 298 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 SS18Q15532 418 aa5.46□□□□□ -1.53
PDLIM5-204ENST00000380176 IGKV2-28A0A075B6P5 120 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 IGKV2D-28P01615 120 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 C2orf82Q6UX34 121 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 NTN5Q8WTR8 489 aaPredicted RBP5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 TEX49A0A1B0GTD5 131 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 SPART-AS1P0CW21 52 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 HRCT1Q6UXD1 115 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 LINC00337Q8N6G1 96 aa5.46□□□□□ -1.54
PDLIM5-204ENST00000380176 ANGP03950 147 aaKnown RBP5.45□□□□□ -1.54
PDLIM5-204ENST00000380176 CCL18P55774 89 aa5.45□□□□□ -1.54
PDLIM5-204ENST00000380176 KRTAP24-1Q3LI83 254 aa5.45□□□□□ -1.54
PDLIM5-204ENST00000380176 COPS9Q8WXC6 57 aa5.45□□□□□ -1.54
PDLIM5-204ENST00000380176 TENM3Q9P273 2699 aa5.45□□□□□ -1.54
PDLIM5-204ENST00000380176 SND1-IT1Q9HBX3 110 aa5.45□□□□□ -1.54
PDLIM5-204ENST00000380176 REG3AQ06141 175 aa5.44□□□□□ -1.54
PDLIM5-204ENST00000380176 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
PDLIM5-204ENST00000380176 IBA57-AS1B1ANH7 110 aa5.44□□□□□ -1.54
PDLIM5-204ENST00000380176 COX7A2LO14548 114 aa5.44□□□□□ -1.54
PDLIM5-204ENST00000380176 LINC01600Q96MT4 127 aa5.44□□□□□ -1.54
PDLIM5-204ENST00000380176 Q8IZM0 81 aa5.43□□□□□ -1.54
PDLIM5-204ENST00000380176 FAM218AQ96MZ4 157 aa5.43□□□□□ -1.54
PDLIM5-204ENST00000380176 MAST4O15021 2626 aa5.43□□□□□ -1.54
PDLIM5-204ENST00000380176 KIAA0087Q14695 138 aa5.43□□□□□ -1.54
PDLIM5-204ENST00000380176 CD164L2Q6UWJ8 174 aa5.43□□□□□ -1.54
PDLIM5-204ENST00000380176 LINC01561Q8N1V8 128 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 OXTP01178 125 aa5.42□□□□□ -1.54
PDLIM5-204ENST00000380176 CRPP02741 224 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms