RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 HILS1P60008 231 aa9.05□□□□□ -0.96
USP11-204ENST00000377107 CSNK1G2-AS1Q8NCQ2 148 aa9.05□□□□□ -0.96
USP11-204ENST00000377107 C9orf116Q5BN46 136 aaPredicted RBP9.05□□□□□ -0.96
USP11-204ENST00000377107 CFAP161Q6P656 301 aa9.05□□□□□ -0.96
USP11-204ENST00000377107 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
USP11-204ENST00000377107 NDUFV3P56181 108 aaKnown RBP9.04□□□□□ -0.96
USP11-204ENST00000377107 DAD1P61803 113 aa9.04□□□□□ -0.96
USP11-204ENST00000377107 KRTAP10-3P60369 221 aa9.04□□□□□ -0.96
USP11-204ENST00000377107 A0A087WYN8 130 aa9.03□□□□□ -0.96
USP11-204ENST00000377107 IGHV3OR16-9A0A0B4J2B5 98 aa9.03□□□□□ -0.96
USP11-204ENST00000377107 PDZD2O15018 2839 aa9.03□□□□□ -0.96
USP11-204ENST00000377107 C14orf132Q9NPU4 83 aa9.03□□□□□ -0.96
USP11-204ENST00000377107 LY6G6DO95868 133 aa9.02□□□□□ -0.96
USP11-204ENST00000377107 PRO0255Q9UI72 69 aa9.02□□□□□ -0.96
USP11-204ENST00000377107 OVOL2Q9BRP0 275 aa9.02□□□□□ -0.97
USP11-204ENST00000377107 OTOGQ6ZRI0 2925 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 IGKV2-28A0A075B6P5 120 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 CCDC179H3BU77 68 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 IGKV2D-28P01615 120 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 SHISA2Q6UWI4 295 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 CITED1Q99966 193 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 F8P00451 2351 aa9.01□□□□□ -0.97
USP11-204ENST00000377107 C16orf95Q9H693 158 aa9□□□□□ -0.97
USP11-204ENST00000377107 HIVEP1P15822 2718 aa9□□□□□ -0.97
USP11-204ENST00000377107 A0A087WZ39 114 aa9□□□□□ -0.97
USP11-204ENST00000377107 FAM236AA0A1B0GUQ0 79 aa8.99□□□□□ -0.97
USP11-204ENST00000377107 FAM236BA0A1B0GV22 79 aa8.99□□□□□ -0.97
USP11-204ENST00000377107 NCR3O14931 201 aa8.99□□□□□ -0.97
USP11-204ENST00000377107 NOTCH1P46531 2555 aa8.98□□□□□ -0.97
USP11-204ENST00000377107 CHCHD10Q8WYQ3 142 aaPredicted RBP8.98□□□□□ -0.97
USP11-204ENST00000377107 IGHV4-28A0A0C4DH34 117 aa8.98□□□□□ -0.97
USP11-204ENST00000377107 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
USP11-204ENST00000377107 KLK12Q9UKR0 248 aa8.98□□□□□ -0.97
USP11-204ENST00000377107 IBA57-AS1B1ANH7 110 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 M0QXV9 152 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 X6R8D5 127 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 MAST4O15021 2626 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 TRACP01848 142 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 REG3AQ06141 175 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 S100A7L2Q5SY68 101 aa8.97□□□□□ -0.97
USP11-204ENST00000377107 NSD1Q96L73 2696 aaPredicted RBP8.96□□□□□ -0.97
USP11-204ENST00000377107 C9orf129Q5T035 196 aaKnown RBP8.96□□□□□ -0.97
USP11-204ENST00000377107 CELA1Q9UNI1 258 aa8.96□□□□□ -0.97
USP11-204ENST00000377107 C6orf223Q8N319 242 aa8.96□□□□□ -0.98
USP11-204ENST00000377107 STAB1Q9NY15 2570 aa8.95□□□□□ -0.98
USP11-204ENST00000377107 NHLRC4P0CG21 123 aaPredicted RBP8.95□□□□□ -0.98
USP11-204ENST00000377107 RPL28P46779 137 aaKnown RBP8.95□□□□□ -0.98
USP11-204ENST00000377107 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
USP11-204ENST00000377107 SDIM1Q6ZPB5 146 aa8.94□□□□□ -0.98
USP11-204ENST00000377107 FAM110AQ9BQ89 295 aa8.94□□□□□ -0.98
USP11-204ENST00000377107 C9orf66Q5T8R8 295 aa8.94□□□□□ -0.98
USP11-204ENST00000377107 SMCR5Q8TEV8 140 aa8.94□□□□□ -0.98
USP11-204ENST00000377107 KIR2DL5BQ8NHK3 375 aa8.93□□□□□ -0.98
USP11-204ENST00000377107 FAM19A3Q7Z5A8 133 aa8.93□□□□□ -0.98
USP11-204ENST00000377107 UNQ6190/PRO20217Q6UXQ8 127 aa8.92□□□□□ -0.98
USP11-204ENST00000377107 XAGE1AQ9HD64 81 aa8.92□□□□□ -0.98
USP11-204ENST00000377107 APOC4P55056 127 aa8.92□□□□□ -0.98
USP11-204ENST00000377107 H0YGX0 51 aa8.91□□□□□ -0.98
USP11-204ENST00000377107 HIST1H4AP62805 103 aaKnown RBP8.91□□□□□ -0.98
USP11-204ENST00000377107 SPAG11BQ08648 103 aa8.91□□□□□ -0.98
USP11-204ENST00000377107 RETNQ9HD89 108 aa8.91□□□□□ -0.98
USP11-204ENST00000377107 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.99
USP11-204ENST00000377107 C6orf99Q4VX62 202 aa8.9□□□□□ -0.99
USP11-204ENST00000377107 ORMDL1Q9P0S3 153 aa8.9□□□□□ -0.99
USP11-204ENST00000377107 HIGD2BQ4VC39 106 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 C10orf25Q5T742 122 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 TRRAPQ9Y4A5 3859 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 SPART-AS1P0CW21 52 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 CD164L2Q6UWJ8 174 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 ACYP1P07311 99 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 OXLD1Q5BKU9 147 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 Q8IZM0 81 aa8.89□□□□□ -0.99
USP11-204ENST00000377107 MRPL23Q16540 153 aaKnown RBP8.88□□□□□ -0.99
USP11-204ENST00000377107 LINC00643Q86TS7 51 aa8.88□□□□□ -0.99
USP11-204ENST00000377107 FAM240AA0A1B0GVK7 77 aa8.88□□□□□ -0.99
USP11-204ENST00000377107 LYRM9A8MSI8 78 aa8.88□□□□□ -0.99
USP11-204ENST00000377107 LAMTOR3Q9UHA4 124 aa8.88□□□□□ -0.99
USP11-204ENST00000377107 SMIM9A6NGZ8 99 aa8.87□□□□□ -0.99
USP11-204ENST00000377107 A0A087WVE0 104 aa8.87□□□□□ -0.99
USP11-204ENST00000377107 A0A1B0GUV1 79 aa8.87□□□□□ -0.99
USP11-204ENST00000377107 IGHV4-30-4P0DP06 118 aa8.87□□□□□ -0.99
USP11-204ENST00000377107 CXCL5P42830 114 aa8.87□□□□□ -0.99
USP11-204ENST00000377107 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
USP11-204ENST00000377107 PKD1L1Q8TDX9 2849 aa8.86□□□□□ -0.99
USP11-204ENST00000377107 C22orf24Q9Y442 160 aa8.86□□□□□ -0.99
USP11-204ENST00000377107 CYSRT1A8MQ03 144 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 NBEAL1Q6ZS30 2694 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 DEFB121Q5J5C9 76 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 C9orf153Q5TBE3 101 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 TMEM126AQ9H061 195 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 SMIM20Q8N5G0 67 aa8.85□□□□□ -0.99
USP11-204ENST00000377107 Q6Q795 121 aa8.84□□□□□ -0.99
USP11-204ENST00000377107 ANK3Q12955 4377 aaKnown RBP8.83□□□□□ -1
USP11-204ENST00000377107 ZNF561-AS1K7EIQ3 104 aa8.83□□□□□ -1
USP11-204ENST00000377107 KIAA0087Q14695 138 aa8.82□□□□□ -1
USP11-204ENST00000377107 COL6A5A8TX70 2615 aa8.81□□□□□ -1
USP11-204ENST00000377107 Q8NDZ9 215 aa8.81□□□□□ -1
USP11-204ENST00000377107 LINC01600Q96MT4 127 aa8.81□□□□□ -1
USP11-204ENST00000377107 Q8N814 137 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms