RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 SPANXCQ9NY87 97 aa12.83□□□□□ -0.36
RXRB-202ENST00000374685 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
RXRB-202ENST00000374685 RPS28P62857 69 aaKnown RBP12.82□□□□□ -0.36
RXRB-202ENST00000374685 OXLD1Q5BKU9 147 aa12.82□□□□□ -0.36
RXRB-202ENST00000374685 COL6A5A8TX70 2615 aa12.82□□□□□ -0.36
RXRB-202ENST00000374685 LITAFQ99732 161 aa12.81□□□□□ -0.36
RXRB-202ENST00000374685 ATP5G1P05496 136 aa12.81□□□□□ -0.36
RXRB-202ENST00000374685 ACYP1P07311 99 aa12.81□□□□□ -0.36
RXRB-202ENST00000374685 TIRAPP58753 221 aa12.81□□□□□ -0.36
RXRB-202ENST00000374685 IGHV4-28A0A0C4DH34 117 aa12.8□□□□□ -0.36
RXRB-202ENST00000374685 SMIM1B2RUZ4 78 aa12.8□□□□□ -0.36
RXRB-202ENST00000374685 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
RXRB-202ENST00000374685 C11orf68Q9H3H3 251 aaKnown RBP12.79□□□□□ -0.36
RXRB-202ENST00000374685 ICOSQ9Y6W8 199 aa12.79□□□□□ -0.36
RXRB-202ENST00000374685 CELA1Q9UNI1 258 aa12.79□□□□□ -0.36
RXRB-202ENST00000374685 PAX4O43316 350 aa12.78□□□□□ -0.36
RXRB-202ENST00000374685 C5orf38Q86SI9 138 aa12.78□□□□□ -0.36
RXRB-202ENST00000374685 KIR2DL5BQ8NHK3 375 aa12.78□□□□□ -0.36
RXRB-202ENST00000374685 IGHV4-30-4P0DP06 118 aa12.77□□□□□ -0.36
RXRB-202ENST00000374685 OR13C6PQ8NH95 151 aa12.77□□□□□ -0.36
RXRB-202ENST00000374685 IGLV5-45A0A087WSX0 123 aa12.77□□□□□ -0.37
RXRB-202ENST00000374685 LST1O00453 97 aa12.77□□□□□ -0.37
RXRB-202ENST00000374685 COX6CP09669 75 aa12.77□□□□□ -0.37
RXRB-202ENST00000374685 APOC4P55056 127 aa12.77□□□□□ -0.37
RXRB-202ENST00000374685 DAD1P61803 113 aa12.77□□□□□ -0.37
RXRB-202ENST00000374685 Q8N3U1 123 aa12.76□□□□□ -0.37
RXRB-202ENST00000374685 KLK5Q9Y337 293 aaPredicted RBP12.76□□□□□ -0.37
RXRB-202ENST00000374685 MIAQ16674 131 aa12.75□□□□□ -0.37
RXRB-202ENST00000374685 LINC00643Q86TS7 51 aa12.75□□□□□ -0.37
RXRB-202ENST00000374685 PRO0255Q9UI72 69 aa12.75□□□□□ -0.37
RXRB-202ENST00000374685 F5H768 121 aa12.75□□□□□ -0.37
RXRB-202ENST00000374685 COX7CP15954 63 aa12.75□□□□□ -0.37
RXRB-202ENST00000374685 XCL1P47992 114 aa12.75□□□□□ -0.37
RXRB-202ENST00000374685 NDUFA1O15239 70 aa12.74□□□□□ -0.37
RXRB-202ENST00000374685 CRYGAP11844 174 aa12.74□□□□□ -0.37
RXRB-202ENST00000374685 CIRBPQ14011 172 aaKnown RBP12.73□□□□□ -0.37
RXRB-202ENST00000374685 IGLV5-39A0A0G2JS06 123 aa12.73□□□□□ -0.37
RXRB-202ENST00000374685 RETNQ9HD89 108 aa12.73□□□□□ -0.37
RXRB-202ENST00000374685 SDIM1Q6ZPB5 146 aa12.72□□□□□ -0.37
RXRB-202ENST00000374685 CXCL5P42830 114 aa12.72□□□□□ -0.37
RXRB-202ENST00000374685 CLEC2BQ92478 149 aa12.72□□□□□ -0.37
RXRB-202ENST00000374685 GAGE2AQ6NT46 116 aa12.71□□□□□ -0.37
RXRB-202ENST00000374685 SMCR5Q8TEV8 140 aa12.71□□□□□ -0.37
RXRB-202ENST00000374685 C2orf48Q96LS8 159 aa12.71□□□□□ -0.37
RXRB-202ENST00000374685 BAHCC1Q9P281 2608 aa12.71□□□□□ -0.37
RXRB-202ENST00000374685 IGLV10-54A0A075B6I4 117 aa12.71□□□□□ -0.37
RXRB-202ENST00000374685 LINC00612Q8N6U2 182 aa12.7□□□□□ -0.38
RXRB-202ENST00000374685 TENM3Q9P273 2699 aa12.7□□□□□ -0.38
RXRB-202ENST00000374685 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
RXRB-202ENST00000374685 LYRM9A8MSI8 78 aa12.69□□□□□ -0.38
RXRB-202ENST00000374685 Q8NAQ8 132 aa12.68□□□□□ -0.38
RXRB-202ENST00000374685 LINC00308Q8TCZ7 52 aa12.68□□□□□ -0.38
RXRB-202ENST00000374685 WFDC9Q8NEX5 89 aa12.67□□□□□ -0.38
RXRB-202ENST00000374685 ANK2Q01484 3957 aa12.67□□□□□ -0.38
RXRB-202ENST00000374685 PFN2P35080 140 aa12.67□□□□□ -0.38
RXRB-202ENST00000374685 SOSTDC1Q6X4U4 206 aa12.67□□□□□ -0.38
RXRB-202ENST00000374685 COX7B2Q8TF08 81 aa12.67□□□□□ -0.38
RXRB-202ENST00000374685 LINC00959A0A1B0GUT2 108 aa12.66□□□□□ -0.38
RXRB-202ENST00000374685 LINC00269Q8N2A0 174 aa12.66□□□□□ -0.38
RXRB-202ENST00000374685 HIST1H4AP62805 103 aaKnown RBP12.66□□□□□ -0.38
RXRB-202ENST00000374685 ANGP03950 147 aaKnown RBP12.66□□□□□ -0.38
RXRB-202ENST00000374685 KRTAP10-11P60412 298 aa12.65□□□□□ -0.38
RXRB-202ENST00000374685 IGHV3OR16-9A0A0B4J2B5 98 aa12.65□□□□□ -0.38
RXRB-202ENST00000374685 SPART-AS1P0CW21 52 aa12.64□□□□□ -0.39
RXRB-202ENST00000374685 LINC00158P58513 81 aa12.64□□□□□ -0.39
RXRB-202ENST00000374685 FAM19A3Q7Z5A8 133 aa12.64□□□□□ -0.39
RXRB-202ENST00000374685 NBEAL1Q6ZS30 2694 aa12.64□□□□□ -0.39
RXRB-202ENST00000374685 ATOX1O00244 68 aa12.63□□□□□ -0.39
RXRB-202ENST00000374685 MIFP14174 115 aa12.63□□□□□ -0.39
RXRB-202ENST00000374685 MIR7-3HGQ8N6C7 128 aa12.62□□□□□ -0.39
RXRB-202ENST00000374685 TRACP01848 142 aa12.62□□□□□ -0.39
RXRB-202ENST00000374685 PRB2P02812 416 aaPredicted RBP12.62□□□□□ -0.39
RXRB-202ENST00000374685 C6orf226Q5I0X4 101 aa12.62□□□□□ -0.39
RXRB-202ENST00000374685 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
RXRB-202ENST00000374685 hADV29S1A0JD25 119 aa12.61□□□□□ -0.39
RXRB-202ENST00000374685 TIMM17BO60830 172 aa12.61□□□□□ -0.39
RXRB-202ENST00000374685 TMEM258P61165 79 aa12.61□□□□□ -0.39
RXRB-202ENST00000374685 SS18Q15532 418 aa12.61□□□□□ -0.39
RXRB-202ENST00000374685 MGAM2Q2M2H8 2515 aa12.6□□□□□ -0.39
RXRB-202ENST00000374685 CYSRT1A8MQ03 144 aa12.59□□□□□ -0.39
RXRB-202ENST00000374685 A0A087WZ39 114 aa12.58□□□□□ -0.4
RXRB-202ENST00000374685 CYSTM1Q9H1C7 97 aa12.58□□□□□ -0.4
RXRB-202ENST00000374685 REG3AQ06141 175 aa12.56□□□□□ -0.4
RXRB-202ENST00000374685 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
RXRB-202ENST00000374685 A0A1B0GUV1 79 aa12.55□□□□□ -0.4
RXRB-202ENST00000374685 COX7A2LO14548 114 aa12.55□□□□□ -0.4
RXRB-202ENST00000374685 OXTP01178 125 aa12.55□□□□□ -0.4
RXRB-202ENST00000374685 KLK12Q9UKR0 248 aa12.55□□□□□ -0.4
RXRB-202ENST00000374685 MALP21145 153 aa12.54□□□□□ -0.4
RXRB-202ENST00000374685 RPL18AQ02543 176 aaKnown RBP12.54□□□□□ -0.4
RXRB-202ENST00000374685 UPK3BQ9BT76 320 aa12.54□□□□□ -0.4
RXRB-202ENST00000374685 SND1-IT1Q9HBX3 110 aa12.53□□□□□ -0.4
RXRB-202ENST00000374685 Q5XG85 94 aa12.53□□□□□ -0.4
RXRB-202ENST00000374685 C4orf26Q17RF5 130 aa12.52□□□□□ -0.4
RXRB-202ENST00000374685 Q6ZTC4 211 aa12.52□□□□□ -0.4
RXRB-202ENST00000374685 MRAPQ8TCY5 172 aa12.52□□□□□ -0.4
RXRB-202ENST00000374685 C22orf24Q9Y442 160 aa12.52□□□□□ -0.41
RXRB-202ENST00000374685 C9orf116Q5BN46 136 aaPredicted RBP12.51□□□□□ -0.41
RXRB-202ENST00000374685 SERP2Q8N6R1 65 aa12.51□□□□□ -0.41
RXRB-202ENST00000374685 INAFM2P0DMQ5 153 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms