RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 A6NED7 52 aa12.24□□□□□ -0.45
PTP4A1-201ENST00000370651 USP9YO00507 2555 aaPredicted RBP12.24□□□□□ -0.45
PTP4A1-201ENST00000370651 FN1P02751 2386 aaKnown RBP12.23□□□□□ -0.45
PTP4A1-201ENST00000370651 EGFEM1PQ0D2K5 195 aa12.23□□□□□ -0.45
PTP4A1-201ENST00000370651 CASC2Q6XLA1 102 aa12.23□□□□□ -0.45
PTP4A1-201ENST00000370651 ZNF843Q8N446 348 aa12.23□□□□□ -0.45
PTP4A1-201ENST00000370651 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
PTP4A1-201ENST00000370651 A0A1W2PPR1 153 aa12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 SOSTDC1Q6X4U4 206 aa12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 FHL2Q14192 279 aa12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 LINC00337Q8N6G1 96 aa12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 INAFM1C9JVW0 142 aa12.22□□□□□ -0.45
PTP4A1-201ENST00000370651 LOC107984640A0A0U1RRK4 108 aa12.21□□□□□ -0.45
PTP4A1-201ENST00000370651 CEP295Q9C0D2 2601 aa12.21□□□□□ -0.46
PTP4A1-201ENST00000370651 LINC00315P59091 139 aa12.2□□□□□ -0.46
PTP4A1-201ENST00000370651 TRAV10A0A0B4J240 114 aa12.2□□□□□ -0.46
PTP4A1-201ENST00000370651 PRYO14603 147 aa12.19□□□□□ -0.46
PTP4A1-201ENST00000370651 C1orf137Q5JT78 98 aa12.18□□□□□ -0.46
PTP4A1-201ENST00000370651 Q8N9L7 120 aa12.18□□□□□ -0.46
PTP4A1-201ENST00000370651 IGLV5-39A0A0G2JS06 123 aa12.18□□□□□ -0.46
PTP4A1-201ENST00000370651 LRCOL1A6NCL2 159 aa12.18□□□□□ -0.46
PTP4A1-201ENST00000370651 IGLV1-51P01701 117 aa12.18□□□□□ -0.46
PTP4A1-201ENST00000370651 Q6ZVQ6 151 aa12.17□□□□□ -0.46
PTP4A1-201ENST00000370651 JMJD1CQ15652 2540 aa12.17□□□□□ -0.46
PTP4A1-201ENST00000370651 A0A1B0GUV1 79 aa12.15□□□□□ -0.46
PTP4A1-201ENST00000370651 PRR15LQ9BU68 103 aa12.15□□□□□ -0.46
PTP4A1-201ENST00000370651 PKD1L2Q7Z442 2459 aa12.15□□□□□ -0.46
PTP4A1-201ENST00000370651 LINC00575Q6W349 94 aa12.15□□□□□ -0.46
PTP4A1-201ENST00000370651 LINC00208Q96KT6 92 aa12.14□□□□□ -0.47
PTP4A1-201ENST00000370651 Q8N2B8 174 aa12.13□□□□□ -0.47
PTP4A1-201ENST00000370651 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
PTP4A1-201ENST00000370651 ANKRD11Q6UB99 2663 aaPredicted RBP12.13□□□□□ -0.47
PTP4A1-201ENST00000370651 LINC01547P58512 204 aaPredicted RBP12.13□□□□□ -0.47
PTP4A1-201ENST00000370651 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
PTP4A1-201ENST00000370651 TMEM254Q8TBM7 123 aa12.13□□□□□ -0.47
PTP4A1-201ENST00000370651 FAM19A4Q96LR4 140 aa12.12□□□□□ -0.47
PTP4A1-201ENST00000370651 C6orf223Q8N319 242 aa12.11□□□□□ -0.47
PTP4A1-201ENST00000370651 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
PTP4A1-201ENST00000370651 A8MTW9 85 aa12.11□□□□□ -0.47
PTP4A1-201ENST00000370651 LINC01561Q8N1V8 128 aa12.11□□□□□ -0.47
PTP4A1-201ENST00000370651 IGHV4-30-4P0DP06 118 aa12.1□□□□□ -0.47
PTP4A1-201ENST00000370651 ZFYVE26Q68DK2 2539 aa12.1□□□□□ -0.47
PTP4A1-201ENST00000370651 CRYGAP11844 174 aa12.1□□□□□ -0.47
PTP4A1-201ENST00000370651 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
PTP4A1-201ENST00000370651 LY6G6DO95868 133 aa12.09□□□□□ -0.47
PTP4A1-201ENST00000370651 ZNF706Q9Y5V0 76 aaPredicted RBP12.09□□□□□ -0.47
PTP4A1-201ENST00000370651 SHISA2Q6UWI4 295 aa12.08□□□□□ -0.47
PTP4A1-201ENST00000370651 PTPRBP23467 1997 aa12.08□□□□□ -0.48
PTP4A1-201ENST00000370651 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
PTP4A1-201ENST00000370651 PLAC8L1A1L4L8 177 aa12.07□□□□□ -0.48
PTP4A1-201ENST00000370651 IGHV3OR16-9A0A0B4J2B5 98 aa12.07□□□□□ -0.48
PTP4A1-201ENST00000370651 PMAIP1Q13794 54 aa12.06□□□□□ -0.48
PTP4A1-201ENST00000370651 IGLV9-49A0A0B4J1Y8 123 aa12.06□□□□□ -0.48
PTP4A1-201ENST00000370651 CXCL6P80162 114 aa12.06□□□□□ -0.48
PTP4A1-201ENST00000370651 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
PTP4A1-201ENST00000370651 C10orf25Q5T742 122 aa12.05□□□□□ -0.48
PTP4A1-201ENST00000370651 TRBV7-6A0A0J9YX20 115 aa12.05□□□□□ -0.48
PTP4A1-201ENST00000370651 FAM218AQ96MZ4 157 aa12.04□□□□□ -0.48
PTP4A1-201ENST00000370651 REG3GQ6UW15 175 aa12.03□□□□□ -0.48
PTP4A1-201ENST00000370651 K7ERS5 55 aa12.03□□□□□ -0.48
PTP4A1-201ENST00000370651 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
PTP4A1-201ENST00000370651 PLA2G2AP14555 144 aa12.03□□□□□ -0.48
PTP4A1-201ENST00000370651 PSPHP1O15172 72 aa12.02□□□□□ -0.49
PTP4A1-201ENST00000370651 OXLD1Q5BKU9 147 aa12.01□□□□□ -0.49
PTP4A1-201ENST00000370651 C2orf48Q96LS8 159 aa12.01□□□□□ -0.49
PTP4A1-201ENST00000370651 A0A087WSZ3 146 aa11.99□□□□□ -0.49
PTP4A1-201ENST00000370651 ESRGQ1W209 222 aa11.99□□□□□ -0.49
PTP4A1-201ENST00000370651 LINC00474Q9P2X8 69 aa11.99□□□□□ -0.49
PTP4A1-201ENST00000370651 RPS28P62857 69 aaKnown RBP11.99□□□□□ -0.49
PTP4A1-201ENST00000370651 C7orf33Q8WU49 177 aa11.98□□□□□ -0.49
PTP4A1-201ENST00000370651 F8WDY8 70 aa11.98□□□□□ -0.49
PTP4A1-201ENST00000370651 Q6ZTC4 211 aa11.98□□□□□ -0.49
PTP4A1-201ENST00000370651 Q9UF83 564 aa11.98□□□□□ -0.49
PTP4A1-201ENST00000370651 RETNQ9HD89 108 aa11.98□□□□□ -0.49
PTP4A1-201ENST00000370651 SPATA3Q8NHX4 192 aa11.97□□□□□ -0.49
PTP4A1-201ENST00000370651 Q6ZRU5 148 aa11.97□□□□□ -0.49
PTP4A1-201ENST00000370651 BCE1O60756 84 aa11.96□□□□□ -0.49
PTP4A1-201ENST00000370651 LYPD5Q6UWN5 251 aa11.96□□□□□ -0.49
PTP4A1-201ENST00000370651 PRO0628Q9UI54 55 aa11.96□□□□□ -0.49
PTP4A1-201ENST00000370651 C16orf95Q9H693 158 aa11.96□□□□□ -0.5
PTP4A1-201ENST00000370651 ZNF462Q96JM2 2506 aa11.95□□□□□ -0.5
PTP4A1-201ENST00000370651 HCG22E2RYF7 251 aa11.95□□□□□ -0.5
PTP4A1-201ENST00000370651 H0Y9P7 68 aa11.95□□□□□ -0.5
PTP4A1-201ENST00000370651 Q9BRP9 147 aa11.94□□□□□ -0.5
PTP4A1-201ENST00000370651 LRRK2Q5S007 2527 aa11.94□□□□□ -0.5
PTP4A1-201ENST00000370651 DEFB116Q30KQ4 102 aa11.94□□□□□ -0.5
PTP4A1-201ENST00000370651 MTORP42345 2549 aa11.93□□□□□ -0.5
PTP4A1-201ENST00000370651 M0R2N4 97 aa11.93□□□□□ -0.5
PTP4A1-201ENST00000370651 PCOTHQ58A44 107 aa11.93□□□□□ -0.5
PTP4A1-201ENST00000370651 LITAFQ99732 161 aa11.92□□□□□ -0.5
PTP4A1-201ENST00000370651 SMR3AQ99954 134 aa11.91□□□□□ -0.5
PTP4A1-201ENST00000370651 MUC4Q99102 2169 aa11.9□□□□□ -0.5
PTP4A1-201ENST00000370651 IGHV6-1A0A0B4J1U7 121 aa11.9□□□□□ -0.5
PTP4A1-201ENST00000370651 hDV103S1A0JD37 113 aa11.9□□□□□ -0.5
PTP4A1-201ENST00000370651 C4orf26Q17RF5 130 aa11.9□□□□□ -0.51
PTP4A1-201ENST00000370651 SMIM29Q86T20 159 aa11.89□□□□□ -0.51
PTP4A1-201ENST00000370651 SPTBN4Q9H254 2564 aa11.88□□□□□ -0.51
PTP4A1-201ENST00000370651 KIAA0087Q14695 138 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms