RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 IGLV5-39A0A0G2JS06 123 aa7.58□□□□□ -1.2
CSNK1E-202ENST00000366216 SPINK8P0C7L1 97 aa7.58□□□□□ -1.2
CSNK1E-202ENST00000366216 SS18Q15532 418 aa7.58□□□□□ -1.2
CSNK1E-202ENST00000366216 TAL2Q16559 108 aa7.58□□□□□ -1.2
CSNK1E-202ENST00000366216 TRAV8-3A0A0A6YYJ7 113 aa7.57□□□□□ -1.2
CSNK1E-202ENST00000366216 IGHV3OR16-9A0A0B4J2B5 98 aa7.57□□□□□ -1.2
CSNK1E-202ENST00000366216 HINT1P49773 126 aaPredicted RBP7.57□□□□□ -1.2
CSNK1E-202ENST00000366216 ESRGQ1W209 222 aa7.57□□□□□ -1.2
CSNK1E-202ENST00000366216 BVES-AS1Q5T3Y7 98 aa7.57□□□□□ -1.2
CSNK1E-202ENST00000366216 IGHV3-64A0A075B6Q5 118 aa7.56□□□□□ -1.2
CSNK1E-202ENST00000366216 IGKV3OR2-268A0A0C4DH90 116 aa7.56□□□□□ -1.2
CSNK1E-202ENST00000366216 SMIM1B2RUZ4 78 aa7.56□□□□□ -1.2
CSNK1E-202ENST00000366216 ANGP03950 147 aaKnown RBP7.56□□□□□ -1.2
CSNK1E-202ENST00000366216 LINC01561Q8N1V8 128 aa7.56□□□□□ -1.2
CSNK1E-202ENST00000366216 LINC00269Q8N2A0 174 aa7.56□□□□□ -1.2
CSNK1E-202ENST00000366216 A0A087WZ39 114 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 H3BS24 57 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 REG3AQ06141 175 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 BATFQ16520 125 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 COL5A1-AS1Q5SY13 56 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 SCGB1D4Q6XE38 83 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 PRR34Q9NV39 138 aa7.55□□□□□ -1.2
CSNK1E-202ENST00000366216 Q8N3U1 123 aa7.54□□□□□ -1.2
CSNK1E-202ENST00000366216 ORAOV1Q8WV07 137 aa7.54□□□□□ -1.2
CSNK1E-202ENST00000366216 SPANXB1Q9NS25 103 aaPredicted RBP7.54□□□□□ -1.2
CSNK1E-202ENST00000366216 NDUFA12Q9UI09 145 aa7.54□□□□□ -1.2
CSNK1E-202ENST00000366216 NDUFA1O15239 70 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 XGP55808 180 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 LINC01556Q5JQF7 62 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 CD164L2Q6UWJ8 174 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 WFDC10BQ8IUB3 73 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 CEND1Q8N111 149 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 C10orf126Q8N4M7 172 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 TM2D2Q9BX73 214 aa7.53□□□□□ -1.2
CSNK1E-202ENST00000366216 DNAH8Q96JB1 4490 aa7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 LRP1Q07954 4544 aaKnown RBP7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 A0A0J9YXY3 114 aa7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 FUSP35637 526 aaKnown RBP eCLIP7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 CLPSL2Q6UWE3 100 aa7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 CHCHD10Q8WYQ3 142 aaPredicted RBP7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 HIST1H4GQ99525 98 aa7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 KRTAP1-5Q9BYS1 174 aa7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 KLK12Q9UKR0 248 aa7.52□□□□□ -1.21
CSNK1E-202ENST00000366216 TRAV8-4A0A0B4J246 113 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 TIMM17BO60830 172 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 IGHV3-30P01768 117 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 DNAH10OSP0CZ25 163 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 XCL1P47992 114 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 CCL18P55774 89 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 ENHOQ6UWT2 76 aa7.51□□□□□ -1.21
CSNK1E-202ENST00000366216 A6NDN8 102 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 TMEM238C9JI98 176 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 CRPP02741 224 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 GCSHP23434 173 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 HERV-K104P63124 156 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 C5orf38Q86SI9 138 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 ZNF625Q96I27 306 aaPredicted RBP7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 UPK3BQ9BT76 320 aa7.5□□□□□ -1.21
CSNK1E-202ENST00000366216 COX7A2LO14548 114 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 FXYD2P54710 66 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 FOXI1Q12951 378 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 SRSF9Q13242 221 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 MIAQ16674 131 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 SERTAD4-AS1Q5TG53 156 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 SFTA2Q6UW10 78 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 Q6ZVH6 145 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 Q9H8V8 135 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 LINC00588Q9Y4M8 146 aa7.49□□□□□ -1.21
CSNK1E-202ENST00000366216 SMR3BP02814 79 aaPredicted RBP7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 PTTG1IPP53801 180 aa7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 Q8IZM0 81 aa7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 UBE2WQ96B02 151 aa7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 LITAFQ99732 161 aa7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 SPANXDQ9BXN6 97 aa7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 SPANXCQ9NY87 97 aa7.48□□□□□ -1.21
CSNK1E-202ENST00000366216 IGLV10-54A0A075B6I4 117 aa7.47□□□□□ -1.21
CSNK1E-202ENST00000366216 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
CSNK1E-202ENST00000366216 CIRBPQ14011 172 aaKnown RBP7.47□□□□□ -1.21
CSNK1E-202ENST00000366216 FAT3Q8TDW7 4589 aa7.46□□□□□ -1.21
CSNK1E-202ENST00000366216 APOMO95445 188 aa7.46□□□□□ -1.22
CSNK1E-202ENST00000366216 TTC32Q5I0X7 151 aa7.46□□□□□ -1.22
CSNK1E-202ENST00000366216 TOMM7Q9P0U1 55 aa7.46□□□□□ -1.22
CSNK1E-202ENST00000366216 A0A1B0GWB2 263 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 TAX1BP3O14907 124 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 PRSS2P07478 247 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 SMIM13P0DJ93 91 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 MALP21145 153 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 CXCL5P42830 114 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 KRTAP26-1Q6PEX3 210 aa7.45□□□□□ -1.22
CSNK1E-202ENST00000366216 A0A1B0GV90 55 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 KRTAP29-1A8MX34 341 aaPredicted RBP7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 IBA57-AS1B1ANH7 110 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 K7EP13 123 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 IFITM1P13164 125 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 KIAA0087Q14695 138 aa7.44□□□□□ -1.22
CSNK1E-202ENST00000366216 C6orf226Q5I0X4 101 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms