RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
CSNK1E-201ENST00000359867 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.72□□□□□ -0.85
CSNK1E-201ENST00000359867 TRBV10-2A0A0K0K1G8 114 aa9.72□□□□□ -0.85
CSNK1E-201ENST00000359867 TINCRA0A1B0GVN0 87 aa9.72□□□□□ -0.85
CSNK1E-201ENST00000359867 ATXN8Q156A1 80 aa9.72□□□□□ -0.85
CSNK1E-201ENST00000359867 DGAT2L7PQ6IED9 249 aa9.72□□□□□ -0.85
CSNK1E-201ENST00000359867 PRKDCP78527 4128 aaKnown RBP9.71□□□□□ -0.85
CSNK1E-201ENST00000359867 H7C423 109 aa9.71□□□□□ -0.86
CSNK1E-201ENST00000359867 DEFB130BP0DP73 79 aa9.71□□□□□ -0.86
CSNK1E-201ENST00000359867 DEFB130AP0DP74 79 aa9.71□□□□□ -0.86
CSNK1E-201ENST00000359867 C2orf82Q6UX34 121 aa9.71□□□□□ -0.86
CSNK1E-201ENST00000359867 CLEC2BQ92478 149 aa9.71□□□□□ -0.86
CSNK1E-201ENST00000359867 COL7A1Q02388 2944 aa9.71□□□□□ -0.86
CSNK1E-201ENST00000359867 IGHV4-28A0A0C4DH34 117 aa9.7□□□□□ -0.86
CSNK1E-201ENST00000359867 IGHV1-58A0A0C4DH39 117 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 Q8NAQ8 132 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 TMEM243Q9BU79 118 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 LOC100131303A0A0U1RQF7 123 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 GAGE2AQ6NT46 116 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 HUWE1Q7Z6Z7 4374 aaKnown RBP9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 MIFP14174 115 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 TIRAPP58753 221 aa9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
CSNK1E-201ENST00000359867 hADV29S1A0JD25 119 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 FAM19A3Q7Z5A8 133 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 SMCR5Q8TEV8 140 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 VSIG2Q96IQ7 327 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 TM2D3Q9BRN9 247 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 DNAH9Q9NYC9 4486 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 FAM222AQ5U5X8 452 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 LINC01600Q96MT4 127 aa9.68□□□□□ -0.86
CSNK1E-201ENST00000359867 TRBV30A0A0K0K1B3 111 aa9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 UBE2L6O14933 153 aa9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 ZNF625Q96I27 306 aaPredicted RBP9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 MIAQ16674 131 aa9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 Q5XG85 94 aa9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 C2orf48Q96LS8 159 aa9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 PRO0255Q9UI72 69 aa9.67□□□□□ -0.86
CSNK1E-201ENST00000359867 CDKN2A-AS1Q9UH64 79 aa9.66□□□□□ -0.86
CSNK1E-201ENST00000359867 CELA1Q9UNI1 258 aa9.66□□□□□ -0.86
CSNK1E-201ENST00000359867 IGLV5-45A0A087WSX0 123 aa9.66□□□□□ -0.86
CSNK1E-201ENST00000359867 DPH3Q96FX2 82 aa9.66□□□□□ -0.86
CSNK1E-201ENST00000359867 CDC42SE2Q9NRR3 84 aa9.66□□□□□ -0.86
CSNK1E-201ENST00000359867 TRBV6-8A0A0A6YYG3 113 aa9.65□□□□□ -0.86
CSNK1E-201ENST00000359867 FAM240AA0A1B0GVK7 77 aa9.65□□□□□ -0.86
CSNK1E-201ENST00000359867 COX7CP15954 63 aa9.65□□□□□ -0.86
CSNK1E-201ENST00000359867 DSCR8Q96T75 97 aa9.65□□□□□ -0.86
CSNK1E-201ENST00000359867 B9D2Q9BPU9 175 aa9.65□□□□□ -0.86
CSNK1E-201ENST00000359867 SPANXDQ9BXN6 97 aa9.65□□□□□ -0.87
CSNK1E-201ENST00000359867 SPANXCQ9NY87 97 aa9.65□□□□□ -0.87
CSNK1E-201ENST00000359867 GYPEP15421 78 aa9.64□□□□□ -0.87
CSNK1E-201ENST00000359867 COX6A2Q02221 97 aa9.64□□□□□ -0.87
CSNK1E-201ENST00000359867 FBN3Q75N90 2809 aa9.63□□□□□ -0.87
CSNK1E-201ENST00000359867 A0A0J9YWU9 116 aa9.63□□□□□ -0.87
CSNK1E-201ENST00000359867 STAB2Q8WWQ8 2551 aa9.63□□□□□ -0.87
CSNK1E-201ENST00000359867 CRYGAP11844 174 aa9.63□□□□□ -0.87
CSNK1E-201ENST00000359867 DAD1P61803 113 aa9.63□□□□□ -0.87
CSNK1E-201ENST00000359867 LINC00242Q5T6M2 205 aa9.62□□□□□ -0.87
CSNK1E-201ENST00000359867 IMUPQ9GZP8 106 aa9.62□□□□□ -0.87
CSNK1E-201ENST00000359867 COX6CP09669 75 aa9.62□□□□□ -0.87
CSNK1E-201ENST00000359867 SPART-AS1P0CW21 52 aa9.62□□□□□ -0.87
CSNK1E-201ENST00000359867 PAX4O43316 350 aa9.61□□□□□ -0.87
CSNK1E-201ENST00000359867 ATP5G1P05496 136 aa9.6□□□□□ -0.87
CSNK1E-201ENST00000359867 Q9H8V8 135 aa9.6□□□□□ -0.87
CSNK1E-201ENST00000359867 TRACP01848 142 aa9.59□□□□□ -0.87
CSNK1E-201ENST00000359867 TRAV13-1A0A0B4J241 112 aa9.59□□□□□ -0.87
CSNK1E-201ENST00000359867 H3BT86 120 aa9.59□□□□□ -0.87
CSNK1E-201ENST00000359867 LST1O00453 97 aa9.59□□□□□ -0.87
CSNK1E-201ENST00000359867 C11orf68Q9H3H3 251 aaKnown RBP9.59□□□□□ -0.87
CSNK1E-201ENST00000359867 IGLV5-39A0A0G2JS06 123 aa9.58□□□□□ -0.88
CSNK1E-201ENST00000359867 NDUFA1O15239 70 aa9.57□□□□□ -0.88
CSNK1E-201ENST00000359867 LINC00308Q8TCZ7 52 aa9.57□□□□□ -0.88
CSNK1E-201ENST00000359867 A0A1B0GUV1 79 aa9.56□□□□□ -0.88
CSNK1E-201ENST00000359867 HTN3P15516 51 aa9.56□□□□□ -0.88
CSNK1E-201ENST00000359867 NANOS2P60321 138 aaKnown RBP9.56□□□□□ -0.88
CSNK1E-201ENST00000359867 IGLV4-60A0A075B6I1 120 aa9.56□□□□□ -0.88
CSNK1E-201ENST00000359867 SOSTDC1Q6X4U4 206 aa9.56□□□□□ -0.88
CSNK1E-201ENST00000359867 F8WDY8 70 aa9.55□□□□□ -0.88
CSNK1E-201ENST00000359867 C5orf38Q86SI9 138 aa9.55□□□□□ -0.88
CSNK1E-201ENST00000359867 LINC00643Q86TS7 51 aa9.55□□□□□ -0.88
CSNK1E-201ENST00000359867 TGP01266 2768 aa9.55□□□□□ -0.88
CSNK1E-201ENST00000359867 SMIM1B2RUZ4 78 aa9.55□□□□□ -0.88
CSNK1E-201ENST00000359867 Q6ZTC4 211 aa9.55□□□□□ -0.88
CSNK1E-201ENST00000359867 TIMM17BO60830 172 aa9.54□□□□□ -0.88
CSNK1E-201ENST00000359867 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
CSNK1E-201ENST00000359867 C11orf45Q8TAV5 145 aa9.54□□□□□ -0.88
CSNK1E-201ENST00000359867 TMEM258P61165 79 aa9.53□□□□□ -0.88
CSNK1E-201ENST00000359867 LINC00336Q6ZUF6 198 aa9.52□□□□□ -0.88
CSNK1E-201ENST00000359867 HIST1H4AP62805 103 aaKnown RBP9.52□□□□□ -0.89
CSNK1E-201ENST00000359867 A0A096LPF7 62 aa9.52□□□□□ -0.89
CSNK1E-201ENST00000359867 UPK3BQ9BT76 320 aa9.52□□□□□ -0.89
CSNK1E-201ENST00000359867 C1orf43Q9BWL3 253 aa9.52□□□□□ -0.89
CSNK1E-201ENST00000359867 ACYP1P07311 99 aa9.51□□□□□ -0.89
CSNK1E-201ENST00000359867 PKIGQ9Y2B9 76 aa9.51□□□□□ -0.89
CSNK1E-201ENST00000359867 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
CSNK1E-201ENST00000359867 LINC00959A0A1B0GUT2 108 aa9.5□□□□□ -0.89
CSNK1E-201ENST00000359867 IGHV3OR16-9A0A0B4J2B5 98 aa9.5□□□□□ -0.89
CSNK1E-201ENST00000359867 ATOX1O00244 68 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms