RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 OVOL2Q9BRP0 275 aa8.91□□□□□ -0.98
GGPS1-202ENST00000358966 A0A096LPF7 62 aa8.91□□□□□ -0.98
GGPS1-202ENST00000358966 CELA1Q9UNI1 258 aa8.91□□□□□ -0.98
GGPS1-202ENST00000358966 DNAH3Q8TD57 4116 aa8.9□□□□□ -0.98
GGPS1-202ENST00000358966 IGHV3-64A0A075B6Q5 118 aa8.9□□□□□ -0.98
GGPS1-202ENST00000358966 IGHV4-28A0A0C4DH34 117 aa8.9□□□□□ -0.98
GGPS1-202ENST00000358966 TIMM17AQ99595 171 aa8.9□□□□□ -0.98
GGPS1-202ENST00000358966 ACYP1P07311 99 aa8.9□□□□□ -0.98
GGPS1-202ENST00000358966 FHL2Q14192 279 aa8.9□□□□□ -0.98
GGPS1-202ENST00000358966 A0A0B4J2C4 111 aa8.89□□□□□ -0.99
GGPS1-202ENST00000358966 TSPEAR-AS2P59090 65 aa8.89□□□□□ -0.99
GGPS1-202ENST00000358966 UPK3BQ9BT76 320 aa8.89□□□□□ -0.99
GGPS1-202ENST00000358966 A0A0J9YXV3 536 aa8.89□□□□□ -0.99
GGPS1-202ENST00000358966 RPL36AP83881 106 aaKnown RBP8.89□□□□□ -0.99
GGPS1-202ENST00000358966 RPL36ALQ969Q0 106 aaKnown RBP8.89□□□□□ -0.99
GGPS1-202ENST00000358966 TRBV30A0A0K0K1B3 111 aa8.89□□□□□ -0.99
GGPS1-202ENST00000358966 CXCL5P42830 114 aa8.89□□□□□ -0.99
GGPS1-202ENST00000358966 HIST1H4AP62805 103 aaKnown RBP8.89□□□□□ -0.99
GGPS1-202ENST00000358966 APOC4P55056 127 aa8.88□□□□□ -0.99
GGPS1-202ENST00000358966 C1orf195Q5TG92 126 aa8.88□□□□□ -0.99
GGPS1-202ENST00000358966 CLEC2BQ92478 149 aa8.88□□□□□ -0.99
GGPS1-202ENST00000358966 UBE2D4Q9Y2X8 147 aa8.88□□□□□ -0.99
GGPS1-202ENST00000358966 A0A0U1RQV1 116 aa8.88□□□□□ -0.99
GGPS1-202ENST00000358966 TMEM141Q96I45 108 aa8.88□□□□□ -0.99
GGPS1-202ENST00000358966 MUSTN1Q8IVN3 82 aa8.87□□□□□ -0.99
GGPS1-202ENST00000358966 TMEM223A0PJW6 202 aa8.86□□□□□ -0.99
GGPS1-202ENST00000358966 Q8NAQ8 132 aa8.86□□□□□ -0.99
GGPS1-202ENST00000358966 COL7A1Q02388 2944 aa8.86□□□□□ -0.99
GGPS1-202ENST00000358966 HTN3P15516 51 aa8.86□□□□□ -0.99
GGPS1-202ENST00000358966 RPL18AQ02543 176 aaKnown RBP8.85□□□□□ -0.99
GGPS1-202ENST00000358966 SERP2Q8N6R1 65 aa8.85□□□□□ -0.99
GGPS1-202ENST00000358966 TRAV8-3A0A0A6YYJ7 113 aa8.85□□□□□ -0.99
GGPS1-202ENST00000358966 TRBV10-1A0A0K0K1A3 114 aa8.84□□□□□ -0.99
GGPS1-202ENST00000358966 TRBV6-4A0A1B0GX49 114 aa8.84□□□□□ -0.99
GGPS1-202ENST00000358966 AMELXQ99217 191 aa8.84□□□□□ -0.99
GGPS1-202ENST00000358966 ICOSQ9Y6W8 199 aa8.84□□□□□ -0.99
GGPS1-202ENST00000358966 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.84□□□□□ -0.99
GGPS1-202ENST00000358966 A8MZ25 164 aa8.84□□□□□ -0.99
GGPS1-202ENST00000358966 GYPEP15421 78 aa8.84□□□□□ -0.99
GGPS1-202ENST00000358966 LINC01561Q8N1V8 128 aa8.83□□□□□ -1
GGPS1-202ENST00000358966 SDIM1Q6ZPB5 146 aa8.83□□□□□ -1
GGPS1-202ENST00000358966 LINC00612Q8N6U2 182 aa8.83□□□□□ -1
GGPS1-202ENST00000358966 IGKV3OR2-268A0A0C4DH90 116 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 COX6CP09669 75 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 DGAT2L7PQ6IED9 249 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
GGPS1-202ENST00000358966 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
GGPS1-202ENST00000358966 LST1O00453 97 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 MDFIQ99750 246 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 STAB2Q8WWQ8 2551 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 DAD1P61803 113 aa8.82□□□□□ -1
GGPS1-202ENST00000358966 PRSS2P07478 247 aa8.81□□□□□ -1
GGPS1-202ENST00000358966 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
GGPS1-202ENST00000358966 NPC2P61916 151 aa8.81□□□□□ -1
GGPS1-202ENST00000358966 EGFEM1PQ0D2K5 195 aa8.81□□□□□ -1
GGPS1-202ENST00000358966 Q8N3U1 123 aa8.81□□□□□ -1
GGPS1-202ENST00000358966 COX6A2Q02221 97 aa8.8□□□□□ -1
GGPS1-202ENST00000358966 VSIG2Q96IQ7 327 aa8.8□□□□□ -1
GGPS1-202ENST00000358966 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
GGPS1-202ENST00000358966 IGLV4-60A0A075B6I1 120 aa8.79□□□□□ -1
GGPS1-202ENST00000358966 BRK1Q8WUW1 75 aa8.79□□□□□ -1
GGPS1-202ENST00000358966 LYRM9A8MSI8 78 aa8.79□□□□□ -1
GGPS1-202ENST00000358966 UBE2L6O14933 153 aa8.79□□□□□ -1
GGPS1-202ENST00000358966 PAX4O43316 350 aa8.79□□□□□ -1
GGPS1-202ENST00000358966 TMEM243Q9BU79 118 aa8.79□□□□□ -1
GGPS1-202ENST00000358966 MIFP14174 115 aa8.78□□□□□ -1
GGPS1-202ENST00000358966 PRO0255Q9UI72 69 aa8.78□□□□□ -1
GGPS1-202ENST00000358966 A0A087WVE0 104 aa8.78□□□□□ -1
GGPS1-202ENST00000358966 TRBV6-8A0A0A6YYG3 113 aa8.78□□□□□ -1
GGPS1-202ENST00000358966 CDKN2A-AS1Q9UH64 79 aa8.78□□□□□ -1
GGPS1-202ENST00000358966 MRPS36P82909 103 aaKnown RBP8.77□□□□□ -1.01
GGPS1-202ENST00000358966 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1.01
GGPS1-202ENST00000358966 CLPSL2Q6UWE3 100 aa8.77□□□□□ -1.01
GGPS1-202ENST00000358966 HUWE1Q7Z6Z7 4374 aaKnown RBP8.77□□□□□ -1.01
GGPS1-202ENST00000358966 PAPPA-AS1Q5QFB9 102 aa8.77□□□□□ -1.01
GGPS1-202ENST00000358966 DNHD1Q96M86 4753 aa8.77□□□□□ -1.01
GGPS1-202ENST00000358966 CDC42SE2Q9NRR3 84 aa8.76□□□□□ -1.01
GGPS1-202ENST00000358966 IGKV3D-7A0A0C4DH55 119 aa8.75□□□□□ -1.01
GGPS1-202ENST00000358966 EPM2AB3EWF7 344 aa8.75□□□□□ -1.01
GGPS1-202ENST00000358966 USP17L23D6RBM5 183 aa8.75□□□□□ -1.01
GGPS1-202ENST00000358966 SPART-AS1P0CW21 52 aa8.75□□□□□ -1.01
GGPS1-202ENST00000358966 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
GGPS1-202ENST00000358966 LYSTQ99698 3801 aa8.75□□□□□ -1.01
GGPS1-202ENST00000358966 IGHV3-30-3P0DP02 117 aa8.74□□□□□ -1.01
GGPS1-202ENST00000358966 FP248Q71RG6 208 aaPredicted RBP8.74□□□□□ -1.01
GGPS1-202ENST00000358966 TIRAPP58753 221 aa8.74□□□□□ -1.01
GGPS1-202ENST00000358966 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
GGPS1-202ENST00000358966 A0A0J9YWU9 116 aa8.74□□□□□ -1.01
GGPS1-202ENST00000358966 Q6ZTC4 211 aa8.74□□□□□ -1.01
GGPS1-202ENST00000358966 NDUFC2-KCTD14E9PQ53 114 aa8.73□□□□□ -1.01
GGPS1-202ENST00000358966 NDUFC2O95298 119 aa8.73□□□□□ -1.01
GGPS1-202ENST00000358966 TENM2Q9NT68 2774 aa8.72□□□□□ -1.01
GGPS1-202ENST00000358966 A0A0U1RRA0 63 aa8.72□□□□□ -1.01
GGPS1-202ENST00000358966 K7EIL1 84 aa8.71□□□□□ -1.01
GGPS1-202ENST00000358966 LEPROTO15243 131 aa8.71□□□□□ -1.01
GGPS1-202ENST00000358966 NANOS2P60321 138 aaKnown RBP8.71□□□□□ -1.01
GGPS1-202ENST00000358966 ZNF625Q96I27 306 aaPredicted RBP8.71□□□□□ -1.02
GGPS1-202ENST00000358966 A0A0J9YXY3 114 aa8.7□□□□□ -1.02
GGPS1-202ENST00000358966 C6orf226Q5I0X4 101 aa8.7□□□□□ -1.02
GGPS1-202ENST00000358966 DAND5Q8N907 189 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms