RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 Q6YL49 198 aa9.08□□□□□ -0.96
BDNF-202ENST00000356660 LITAFQ99732 161 aa9.08□□□□□ -0.96
BDNF-202ENST00000356660 ORMDL1Q9P0S3 153 aa9.08□□□□□ -0.96
BDNF-202ENST00000356660 PSMB8P28062 276 aa9.07□□□□□ -0.96
BDNF-202ENST00000356660 RPL18AQ02543 176 aaKnown RBP9.07□□□□□ -0.96
BDNF-202ENST00000356660 PMAIP1Q13794 54 aa9.07□□□□□ -0.96
BDNF-202ENST00000356660 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
BDNF-202ENST00000356660 UBL5Q9BZL1 73 aa9.06□□□□□ -0.96
BDNF-202ENST00000356660 H0YGX0 51 aa9.06□□□□□ -0.96
BDNF-202ENST00000356660 IGKV2D-24A0A075B6R9 120 aa9.06□□□□□ -0.96
BDNF-202ENST00000356660 USP17L23D6RBM5 183 aa9.06□□□□□ -0.96
BDNF-202ENST00000356660 C16orf74Q96GX8 76 aa9.06□□□□□ -0.96
BDNF-202ENST00000356660 SMIM1B2RUZ4 78 aa9.05□□□□□ -0.96
BDNF-202ENST00000356660 ZNF843Q8N446 348 aa9.05□□□□□ -0.96
BDNF-202ENST00000356660 WFDC9Q8NEX5 89 aa9.05□□□□□ -0.96
BDNF-202ENST00000356660 SPTSSBQ8NFR3 76 aa9.05□□□□□ -0.96
BDNF-202ENST00000356660 LINC00482Q8N8I6 264 aa9.05□□□□□ -0.96
BDNF-202ENST00000356660 PRB2P02812 416 aaPredicted RBP9.05□□□□□ -0.96
BDNF-202ENST00000356660 SMIM11BQ8TCY0 68 aa9.05□□□□□ -0.96
BDNF-202ENST00000356660 TMEM89A2RUT3 159 aa9.04□□□□□ -0.96
BDNF-202ENST00000356660 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
BDNF-202ENST00000356660 KLK12Q9UKR0 248 aa9.04□□□□□ -0.96
BDNF-202ENST00000356660 CRYGAP11844 174 aa9.04□□□□□ -0.96
BDNF-202ENST00000356660 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
BDNF-202ENST00000356660 A0A087WYN8 130 aa9.03□□□□□ -0.96
BDNF-202ENST00000356660 SMCR5Q8TEV8 140 aa9.03□□□□□ -0.96
BDNF-202ENST00000356660 CXCL5P42830 114 aa9.02□□□□□ -0.96
BDNF-202ENST00000356660 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.96
BDNF-202ENST00000356660 LOC100131303A0A0U1RQF7 123 aa9.02□□□□□ -0.97
BDNF-202ENST00000356660 DCHS2Q6V1P9 2916 aa9.02□□□□□ -0.97
BDNF-202ENST00000356660 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
BDNF-202ENST00000356660 ZNF702PQ9H963 129 aa9.02□□□□□ -0.97
BDNF-202ENST00000356660 INAFM1C9JVW0 142 aa9.01□□□□□ -0.97
BDNF-202ENST00000356660 C9orf66Q5T8R8 295 aa9.01□□□□□ -0.97
BDNF-202ENST00000356660 SMR3AQ99954 134 aa9.01□□□□□ -0.97
BDNF-202ENST00000356660 FLNAP21333 2647 aaKnown RBP9.01□□□□□ -0.97
BDNF-202ENST00000356660 SERP1Q9Y6X1 66 aa9□□□□□ -0.97
BDNF-202ENST00000356660 CHD6Q8TD26 2715 aa9□□□□□ -0.97
BDNF-202ENST00000356660 ENHOQ6UWT2 76 aa9□□□□□ -0.97
BDNF-202ENST00000356660 DEFB105AQ8NG35 78 aa9□□□□□ -0.97
BDNF-202ENST00000356660 SNURFQ9Y675 71 aa9□□□□□ -0.97
BDNF-202ENST00000356660 HELZ2Q9BYK8 2649 aaKnown RBP9□□□□□ -0.97
BDNF-202ENST00000356660 FAM222AQ5U5X8 452 aa9□□□□□ -0.97
BDNF-202ENST00000356660 NKAPP1Q8N9T2 125 aa9□□□□□ -0.97
BDNF-202ENST00000356660 LINC00846Q9NV44 126 aa9□□□□□ -0.97
BDNF-202ENST00000356660 CCL18P55774 89 aa8.99□□□□□ -0.97
BDNF-202ENST00000356660 LINC00337Q8N6G1 96 aa8.99□□□□□ -0.97
BDNF-202ENST00000356660 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
BDNF-202ENST00000356660 ITPR3Q14573 2671 aa8.99□□□□□ -0.97
BDNF-202ENST00000356660 C2orf48Q96LS8 159 aa8.99□□□□□ -0.97
BDNF-202ENST00000356660 LINC01006Q8NI28 216 aa8.98□□□□□ -0.97
BDNF-202ENST00000356660 CELSR1Q9NYQ6 3014 aa8.98□□□□□ -0.97
BDNF-202ENST00000356660 CAMK2N2Q96S95 79 aa8.98□□□□□ -0.97
BDNF-202ENST00000356660 PRO0255Q9UI72 69 aa8.98□□□□□ -0.97
BDNF-202ENST00000356660 TRBV10-1A0A0K0K1A3 114 aa8.97□□□□□ -0.97
BDNF-202ENST00000356660 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.97
BDNF-202ENST00000356660 LINC00269Q8N2A0 174 aa8.96□□□□□ -0.97
BDNF-202ENST00000356660 RPL28P46779 137 aaKnown RBP8.96□□□□□ -0.98
BDNF-202ENST00000356660 KLK9Q2XQG4 91 aa8.96□□□□□ -0.98
BDNF-202ENST00000356660 HILS1P60008 231 aa8.95□□□□□ -0.98
BDNF-202ENST00000356660 SPAG11BQ08648 103 aa8.94□□□□□ -0.98
BDNF-202ENST00000356660 IGLV5-39A0A0G2JS06 123 aa8.94□□□□□ -0.98
BDNF-202ENST00000356660 UPK3BQ9BT76 320 aa8.94□□□□□ -0.98
BDNF-202ENST00000356660 JMJD7-PLA2G4BH0Y9G9 81 aa8.94□□□□□ -0.98
BDNF-202ENST00000356660 HIGD2BQ4VC39 106 aa8.93□□□□□ -0.98
BDNF-202ENST00000356660 IGLV4-60A0A075B6I1 120 aa8.93□□□□□ -0.98
BDNF-202ENST00000356660 NTM-AS1Q6ZSK4 140 aa8.93□□□□□ -0.98
BDNF-202ENST00000356660 BBC3Q96PG8 261 aaPredicted RBP8.93□□□□□ -0.98
BDNF-202ENST00000356660 SCXQ7RTU7 201 aa8.92□□□□□ -0.98
BDNF-202ENST00000356660 IBA57-AS1B1ANH7 110 aa8.92□□□□□ -0.98
BDNF-202ENST00000356660 ODF3L2Q3SX64 289 aa8.92□□□□□ -0.98
BDNF-202ENST00000356660 FAM19A1Q7Z5A9 133 aa8.92□□□□□ -0.98
BDNF-202ENST00000356660 Q6JHZ5 121 aa8.92□□□□□ -0.98
BDNF-202ENST00000356660 F8WEM9 126 aa8.91□□□□□ -0.98
BDNF-202ENST00000356660 TMEM256-PLSCR3K7ERE1 68 aa8.91□□□□□ -0.98
BDNF-202ENST00000356660 PLA2G2AP14555 144 aa8.91□□□□□ -0.98
BDNF-202ENST00000356660 C6orf99Q4VX62 202 aa8.91□□□□□ -0.98
BDNF-202ENST00000356660 NBEAL1Q6ZS30 2694 aa8.91□□□□□ -0.98
BDNF-202ENST00000356660 IGHV4-28A0A0C4DH34 117 aa8.91□□□□□ -0.98
BDNF-202ENST00000356660 LRCOL1A6NCL2 159 aa8.9□□□□□ -0.98
BDNF-202ENST00000356660 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.98
BDNF-202ENST00000356660 ITPR1Q14643 2758 aa8.9□□□□□ -0.98
BDNF-202ENST00000356660 C1orf158Q8N1D5 194 aa8.9□□□□□ -0.98
BDNF-202ENST00000356660 C11orf72Q8NBR9 251 aa8.9□□□□□ -0.99
BDNF-202ENST00000356660 XAGE1AQ9HD64 81 aa8.9□□□□□ -0.99
BDNF-202ENST00000356660 STAB1Q9NY15 2570 aa8.9□□□□□ -0.99
BDNF-202ENST00000356660 IGLV5-45A0A087WSX0 123 aa8.89□□□□□ -0.99
BDNF-202ENST00000356660 TRBV6-8A0A0A6YYG3 113 aa8.89□□□□□ -0.99
BDNF-202ENST00000356660 C9orf129Q5T035 196 aaKnown RBP8.89□□□□□ -0.99
BDNF-202ENST00000356660 HRNRQ86YZ3 2850 aaPredicted RBP8.88□□□□□ -0.99
BDNF-202ENST00000356660 LY6G6DO95868 133 aa8.88□□□□□ -0.99
BDNF-202ENST00000356660 FAM104AQ969W3 186 aa8.88□□□□□ -0.99
BDNF-202ENST00000356660 REG3AQ06141 175 aa8.88□□□□□ -0.99
BDNF-202ENST00000356660 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
BDNF-202ENST00000356660 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
BDNF-202ENST00000356660 TEX15Q9BXT5 2789 aa8.88□□□□□ -0.99
BDNF-202ENST00000356660 CRYBG3Q68DQ2 2970 aa8.87□□□□□ -0.99
BDNF-202ENST00000356660 C9orf116Q5BN46 136 aaPredicted RBP8.87□□□□□ -0.99
BDNF-202ENST00000356660 CHCHD10Q8WYQ3 142 aaPredicted RBP8.87□□□□□ -0.99
BDNF-202ENST00000356660 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms