RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 CRYGAP11844 174 aa9.24□□□□□ -0.93
COL18A1-201ENST00000342220 CSNK1G2-AS1Q8NCQ2 148 aa9.24□□□□□ -0.93
COL18A1-201ENST00000342220 TIMM21Q9BVV7 248 aa9.24□□□□□ -0.93
COL18A1-201ENST00000342220 A8MZ25 164 aa9.24□□□□□ -0.93
COL18A1-201ENST00000342220 COX6CP09669 75 aa9.24□□□□□ -0.93
COL18A1-201ENST00000342220 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.23□□□□□ -0.93
COL18A1-201ENST00000342220 PAX4O43316 350 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 NPC2P61916 151 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 PYGO1Q9Y3Y4 419 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 ICOSQ9Y6W8 199 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 MRPS36P82909 103 aaKnown RBP9.23□□□□□ -0.93
COL18A1-201ENST00000342220 Q5XG85 94 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 LINC00643Q86TS7 51 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 X6R8D5 127 aa9.23□□□□□ -0.93
COL18A1-201ENST00000342220 TRBV30A0A0K0K1B3 111 aa9.22□□□□□ -0.93
COL18A1-201ENST00000342220 ZNF625Q96I27 306 aaPredicted RBP9.22□□□□□ -0.93
COL18A1-201ENST00000342220 C11orf68Q9H3H3 251 aaKnown RBP9.22□□□□□ -0.93
COL18A1-201ENST00000342220 C2orf48Q96LS8 159 aa9.22□□□□□ -0.93
COL18A1-201ENST00000342220 A8MTW9 85 aa9.21□□□□□ -0.93
COL18A1-201ENST00000342220 WFDC9Q8NEX5 89 aa9.21□□□□□ -0.93
COL18A1-201ENST00000342220 LITAFQ99732 161 aa9.21□□□□□ -0.93
COL18A1-201ENST00000342220 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.93
COL18A1-201ENST00000342220 PLAC8L1A1L4L8 177 aa9.21□□□□□ -0.94
COL18A1-201ENST00000342220 ADAMTSL4-AS1Q5T5F5 129 aa9.21□□□□□ -0.94
COL18A1-201ENST00000342220 TOMM7Q9P0U1 55 aa9.21□□□□□ -0.94
COL18A1-201ENST00000342220 ATP5G1P05496 136 aa9.21□□□□□ -0.94
COL18A1-201ENST00000342220 TMEM258P61165 79 aa9.2□□□□□ -0.94
COL18A1-201ENST00000342220 NDUFA12Q9UI09 145 aa9.2□□□□□ -0.94
COL18A1-201ENST00000342220 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
COL18A1-201ENST00000342220 IGHV1-58A0A0C4DH39 117 aa9.2□□□□□ -0.94
COL18A1-201ENST00000342220 F8WDY8 70 aa9.2□□□□□ -0.94
COL18A1-201ENST00000342220 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
COL18A1-201ENST00000342220 IGLV10-54A0A075B6I4 117 aa9.19□□□□□ -0.94
COL18A1-201ENST00000342220 ATOX1O00244 68 aa9.19□□□□□ -0.94
COL18A1-201ENST00000342220 ACYP1P07311 99 aa9.19□□□□□ -0.94
COL18A1-201ENST00000342220 DAZ2Q13117 558 aaKnown RBP9.19□□□□□ -0.94
COL18A1-201ENST00000342220 VSIG2Q96IQ7 327 aa9.18□□□□□ -0.94
COL18A1-201ENST00000342220 LINC01600Q96MT4 127 aa9.18□□□□□ -0.94
COL18A1-201ENST00000342220 TINCRA0A1B0GVN0 87 aa9.18□□□□□ -0.94
COL18A1-201ENST00000342220 SPART-AS1P0CW21 52 aa9.18□□□□□ -0.94
COL18A1-201ENST00000342220 FHL2Q14192 279 aa9.18□□□□□ -0.94
COL18A1-201ENST00000342220 A0A0J9YWU9 116 aa9.17□□□□□ -0.94
COL18A1-201ENST00000342220 Q8N3U1 123 aa9.17□□□□□ -0.94
COL18A1-201ENST00000342220 NANOS2P60321 138 aaKnown RBP9.17□□□□□ -0.94
COL18A1-201ENST00000342220 SPANXDQ9BXN6 97 aa9.17□□□□□ -0.94
COL18A1-201ENST00000342220 LST1O00453 97 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 TMEM243Q9BU79 118 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 SDIM1Q6ZPB5 146 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 MALP21145 153 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 NTM-AS1Q6ZSK4 140 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 DAND5Q8N907 189 aa9.16□□□□□ -0.94
COL18A1-201ENST00000342220 CDKN2A-AS1Q9UH64 79 aa9.15□□□□□ -0.94
COL18A1-201ENST00000342220 PRO0628Q9UI54 55 aa9.15□□□□□ -0.94
COL18A1-201ENST00000342220 PFN2P35080 140 aa9.15□□□□□ -0.94
COL18A1-201ENST00000342220 Q6ZTC4 211 aa9.15□□□□□ -0.94
COL18A1-201ENST00000342220 TENM2Q9NT68 2774 aa9.15□□□□□ -0.95
COL18A1-201ENST00000342220 MIAQ16674 131 aa9.15□□□□□ -0.95
COL18A1-201ENST00000342220 PRO0255Q9UI72 69 aa9.15□□□□□ -0.95
COL18A1-201ENST00000342220 C5orf38Q86SI9 138 aa9.14□□□□□ -0.95
COL18A1-201ENST00000342220 PIK3CD-AS1Q5SR53 167 aa9.14□□□□□ -0.95
COL18A1-201ENST00000342220 IGKV3D-7A0A0C4DH55 119 aa9.13□□□□□ -0.95
COL18A1-201ENST00000342220 SEC61GP60059 68 aa9.13□□□□□ -0.95
COL18A1-201ENST00000342220 XCL1P47992 114 aa9.13□□□□□ -0.95
COL18A1-201ENST00000342220 COX6A2Q02221 97 aa9.13□□□□□ -0.95
COL18A1-201ENST00000342220 CXCL5P42830 114 aa9.13□□□□□ -0.95
COL18A1-201ENST00000342220 OVOL2Q9BRP0 275 aa9.12□□□□□ -0.95
COL18A1-201ENST00000342220 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
COL18A1-201ENST00000342220 RPL18AQ02543 176 aaKnown RBP9.12□□□□□ -0.95
COL18A1-201ENST00000342220 IGLV4-60A0A075B6I1 120 aa9.12□□□□□ -0.95
COL18A1-201ENST00000342220 A0A087WVE0 104 aa9.12□□□□□ -0.95
COL18A1-201ENST00000342220 DAZ4Q86SG3 579 aaKnown RBP9.11□□□□□ -0.95
COL18A1-201ENST00000342220 SERP2Q8N6R1 65 aa9.11□□□□□ -0.95
COL18A1-201ENST00000342220 Q8NAQ8 132 aa9.11□□□□□ -0.95
COL18A1-201ENST00000342220 DAZ3Q9NR90 486 aaKnown RBP9.11□□□□□ -0.95
COL18A1-201ENST00000342220 MIFP14174 115 aa9.1□□□□□ -0.95
COL18A1-201ENST00000342220 TRBV10-1A0A0K0K1A3 114 aa9.1□□□□□ -0.95
COL18A1-201ENST00000342220 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
COL18A1-201ENST00000342220 TRBV6-8A0A0A6YYG3 113 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 A0A0U1RQV1 116 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 NDUFA1O15239 70 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 TIRAPP58753 221 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 C11orf45Q8TAV5 145 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 FAM236DA0A1B0GTK5 79 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 FAM236CP0DP71 79 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 LINC00242Q5T6M2 205 aa9.09□□□□□ -0.95
COL18A1-201ENST00000342220 IGLV5-45A0A087WSX0 123 aa9.08□□□□□ -0.96
COL18A1-201ENST00000342220 LYRM9A8MSI8 78 aa9.08□□□□□ -0.96
COL18A1-201ENST00000342220 IL17DQ8TAD2 202 aa9.08□□□□□ -0.96
COL18A1-201ENST00000342220 Q9H8V8 135 aa9.08□□□□□ -0.96
COL18A1-201ENST00000342220 TGP01266 2768 aa9.08□□□□□ -0.96
COL18A1-201ENST00000342220 CIRBPQ14011 172 aaKnown RBP9.08□□□□□ -0.96
COL18A1-201ENST00000342220 HIST1H4AP62805 103 aaKnown RBP9.07□□□□□ -0.96
COL18A1-201ENST00000342220 UPK3BQ9BT76 320 aa9.07□□□□□ -0.96
COL18A1-201ENST00000342220 TIMM17BO60830 172 aa9.07□□□□□ -0.96
COL18A1-201ENST00000342220 KLK12Q9UKR0 248 aa9.07□□□□□ -0.96
COL18A1-201ENST00000342220 K7EIL1 84 aa9.07□□□□□ -0.96
COL18A1-201ENST00000342220 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
COL18A1-201ENST00000342220 V9GYY9 64 aa9.07□□□□□ -0.96
COL18A1-201ENST00000342220 DEFB131BA0A096LNP1 70 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms