RNA–Protein interactions for RNA: ENST00000329151.5

TMEM54-201, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best) BASIC

Gene TMEM54, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-201ENST00000329151 KIAA0087Q14695 138 aa14.13□□□□□ -0.15
TMEM54-201ENST00000329151 C2orf82Q6UX34 121 aa14.13□□□□□ -0.15
TMEM54-201ENST00000329151 VCX2Q9H322 139 aa14.13□□□□□ -0.15
TMEM54-201ENST00000329151 C2orf66Q6UXQ4 117 aa14.12□□□□□ -0.15
TMEM54-201ENST00000329151 LINC01561Q8N1V8 128 aa14.12□□□□□ -0.15
TMEM54-201ENST00000329151 RPL13AP40429 203 aaKnown RBP14.11□□□□□ -0.15
TMEM54-201ENST00000329151 TRAPPC1Q9Y5R8 145 aa14.11□□□□□ -0.15
TMEM54-201ENST00000329151 C6orf226Q5I0X4 101 aa14.1□□□□□ -0.15
TMEM54-201ENST00000329151 KRTAP11-1Q8IUC1 163 aa14.1□□□□□ -0.15
TMEM54-201ENST00000329151 G0S2P27469 103 aa14.08□□□□□ -0.16
TMEM54-201ENST00000329151 PAPPA-AS1Q5QFB9 102 aa14.07□□□□□ -0.16
TMEM54-201ENST00000329151 YPEL4Q96NS1 127 aa14.07□□□□□ -0.16
TMEM54-201ENST00000329151 SEC11AP67812 179 aa14.06□□□□□ -0.16
TMEM54-201ENST00000329151 C9orf129Q5T035 196 aaKnown RBP14.06□□□□□ -0.16
TMEM54-201ENST00000329151 SMCO4Q9NRQ5 59 aa14.06□□□□□ -0.16
TMEM54-201ENST00000329151 LBHQ53QV2 105 aaPredicted RBP14.05□□□□□ -0.16
TMEM54-201ENST00000329151 CBLN2Q8IUK8 224 aa14.05□□□□□ -0.16
TMEM54-201ENST00000329151 LINC01546A6NGU7 62 aa14.04□□□□□ -0.16
TMEM54-201ENST00000329151 IGIPA6NJ69 53 aa14.04□□□□□ -0.16
TMEM54-201ENST00000329151 NPSP0C0P6 89 aa14.04□□□□□ -0.16
TMEM54-201ENST00000329151 ZC2HC1BQ5TFG8 222 aa14.04□□□□□ -0.16
TMEM54-201ENST00000329151 FA2HQ7L5A8 372 aa14.04□□□□□ -0.16
TMEM54-201ENST00000329151 LINC00469Q8N7U9 141 aa14.04□□□□□ -0.16
TMEM54-201ENST00000329151 GEMIN7Q9H840 131 aaKnown RBP14.04□□□□□ -0.16
TMEM54-201ENST00000329151 HERVK_113P63121 156 aa14.03□□□□□ -0.16
TMEM54-201ENST00000329151 PRR4Q16378 134 aa14.03□□□□□ -0.16
TMEM54-201ENST00000329151 KRTAP7-1Q8IUC3 87 aa14.03□□□□□ -0.16
TMEM54-201ENST00000329151 Q8IZM0 81 aa14.03□□□□□ -0.16
TMEM54-201ENST00000329151 TOMM6Q96B49 74 aa14.03□□□□□ -0.16
TMEM54-201ENST00000329151 NUPR1O60356 82 aa14.02□□□□□ -0.17
TMEM54-201ENST00000329151 AMELXQ99217 191 aa14.02□□□□□ -0.17
TMEM54-201ENST00000329151 KRTAP1-4P0C5Y4 121 aa14.01□□□□□ -0.17
TMEM54-201ENST00000329151 LPAP08519 4548 aa14.01□□□□□ -0.17
TMEM54-201ENST00000329151 ZNF861PO60384 105 aa14□□□□□ -0.17
TMEM54-201ENST00000329151 LINC00173Q6ZV60 143 aa14□□□□□ -0.17
TMEM54-201ENST00000329151 C18orf32Q8TCD1 76 aa14□□□□□ -0.17
TMEM54-201ENST00000329151 TIMM17AQ99595 171 aa14□□□□□ -0.17
TMEM54-201ENST00000329151 XAGE1AQ9HD64 81 aa14□□□□□ -0.17
TMEM54-201ENST00000329151 C22orf24Q9Y442 160 aa14□□□□□ -0.17
TMEM54-201ENST00000329151 LINC01549A6NIU2 74 aa13.99□□□□□ -0.17
TMEM54-201ENST00000329151 ERASQ7Z444 233 aa13.99□□□□□ -0.17
TMEM54-201ENST00000329151 SCGB3A1Q96QR1 104 aa13.99□□□□□ -0.17
TMEM54-201ENST00000329151 F8VRH5 84 aa13.98□□□□□ -0.17
TMEM54-201ENST00000329151 CXCL5P42830 114 aa13.97□□□□□ -0.17
TMEM54-201ENST00000329151 LINC00614P0C842 121 aa13.96□□□□□ -0.17
TMEM54-201ENST00000329151 FAM19A3Q7Z5A8 133 aa13.96□□□□□ -0.17
TMEM54-201ENST00000329151 CDKN2A-AS1Q9UH64 79 aa13.96□□□□□ -0.17
TMEM54-201ENST00000329151 RPL28P46779 137 aaKnown RBP13.95□□□□□ -0.18
TMEM54-201ENST00000329151 URB1-AS1Q96HZ7 61 aa13.95□□□□□ -0.18
TMEM54-201ENST00000329151 MRPL55Q7Z7F7 128 aaKnown RBP13.94□□□□□ -0.18
TMEM54-201ENST00000329151 RAB5BP61020 215 aa13.93□□□□□ -0.18
TMEM54-201ENST00000329151 TP73-AS1Q9UF72 201 aa13.92□□□□□ -0.18
TMEM54-201ENST00000329151 A0A096LNJ9 63 aa13.89□□□□□ -0.19
TMEM54-201ENST00000329151 TSPAN13O95857 204 aa13.89□□□□□ -0.19
TMEM54-201ENST00000329151 BCE1O60756 84 aa13.88□□□□□ -0.19
TMEM54-201ENST00000329151 HBDP02042 147 aa13.88□□□□□ -0.19
TMEM54-201ENST00000329151 COX7B2Q8TF08 81 aa13.88□□□□□ -0.19
TMEM54-201ENST00000329151 TRGC2P03986 189 aa13.87□□□□□ -0.19
TMEM54-201ENST00000329151 PMCHL1Q16048 86 aa13.87□□□□□ -0.19
TMEM54-201ENST00000329151 PDZD11Q5EBL8 140 aa13.87□□□□□ -0.19
TMEM54-201ENST00000329151 NKAPP1Q8N9T2 125 aa13.87□□□□□ -0.19
TMEM54-201ENST00000329151 CST9LQ9H4G1 147 aa13.87□□□□□ -0.19
TMEM54-201ENST00000329151 COLCA2A8K830 154 aa13.86□□□□□ -0.19
TMEM54-201ENST00000329151 CRYGAP11844 174 aa13.86□□□□□ -0.19
TMEM54-201ENST00000329151 PMVKQ15126 192 aa13.86□□□□□ -0.19
TMEM54-201ENST00000329151 TYMSOSQ8TAI1 123 aa13.86□□□□□ -0.19
TMEM54-201ENST00000329151 A0A0U1RQV1 116 aa13.85□□□□□ -0.19
TMEM54-201ENST00000329151 RPL37AP8A6NKH3 93 aa13.85□□□□□ -0.19
TMEM54-201ENST00000329151 CHCHD1Q96BP2 118 aaKnown RBP13.85□□□□□ -0.19
TMEM54-201ENST00000329151 TINCRA0A1B0GVN0 87 aa13.84□□□□□ -0.19
TMEM54-201ENST00000329151 GAGE10A6NGK3 116 aa13.84□□□□□ -0.19
TMEM54-201ENST00000329151 SMIM1B2RUZ4 78 aa13.84□□□□□ -0.19
TMEM54-201ENST00000329151 LINC00167Q96N53 147 aa13.84□□□□□ -0.19
TMEM54-201ENST00000329151 UBE2AP49459 152 aa13.83□□□□□ -0.2
TMEM54-201ENST00000329151 BAGE3Q86Y29 109 aa13.82□□□□□ -0.2
TMEM54-201ENST00000329151 H3BRM9 83 aa13.81□□□□□ -0.2
TMEM54-201ENST00000329151 SCO1O75880 301 aa13.81□□□□□ -0.2
TMEM54-201ENST00000329151 ATP5LO75964 103 aa13.81□□□□□ -0.2
TMEM54-201ENST00000329151 SPINK8P0C7L1 97 aa13.8□□□□□ -0.2
TMEM54-201ENST00000329151 NDUFA6P56556 154 aa13.8□□□□□ -0.2
TMEM54-201ENST00000329151 A0A087X002 238 aa13.78□□□□□ -0.2
TMEM54-201ENST00000329151 IGLV5-45A0A087WSX0 123 aa13.77□□□□□ -0.21
TMEM54-201ENST00000329151 HSBP1O75506 76 aa13.77□□□□□ -0.21
TMEM54-201ENST00000329151 IGLC3P0DOY3 106 aa13.74□□□□□ -0.21
TMEM54-201ENST00000329151 FAM19A2Q8N3H0 131 aa13.74□□□□□ -0.21
TMEM54-201ENST00000329151 IGLV5-37A0A075B6J1 123 aa13.73□□□□□ -0.21
TMEM54-201ENST00000329151 IGKV2-28A0A075B6P5 120 aa13.73□□□□□ -0.21
TMEM54-201ENST00000329151 IGKV2D-28P01615 120 aa13.73□□□□□ -0.21
TMEM54-201ENST00000329151 SERF1AO75920 110 aa13.72□□□□□ -0.21
TMEM54-201ENST00000329151 PFN2P35080 140 aa13.72□□□□□ -0.21
TMEM54-201ENST00000329151 IFI27L1Q96BM0 104 aa13.72□□□□□ -0.21
TMEM54-201ENST00000329151 LINC00310P59036 64 aa13.71□□□□□ -0.21
TMEM54-201ENST00000329151 ANAPC11Q9NYG5 84 aa13.71□□□□□ -0.21
TMEM54-201ENST00000329151 IGKV2D-26A0A0A0MRZ7 120 aa13.7□□□□□ -0.22
TMEM54-201ENST00000329151 FAM229BQ4G0N7 80 aa13.69□□□□□ -0.22
TMEM54-201ENST00000329151 ZNF22P17026 224 aaPredicted RBP13.68□□□□□ -0.22
TMEM54-201ENST00000329151 RPL24P83731 157 aaKnown RBP13.68□□□□□ -0.22
TMEM54-201ENST00000329151 LINC00304Q8N9R0 145 aa13.68□□□□□ -0.22
TMEM54-201ENST00000329151 CHTOPQ9Y3Y2 248 aaKnown RBP13.68□□□□□ -0.22
TMEM54-201ENST00000329151 MUC2Q02817 5179 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 167.3 ms