RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 TRACP01848 142 aa10.98□□□□□ -0.65
SHROOM1-201ENST00000319854 IGLV5-45A0A087WSX0 123 aa10.97□□□□□ -0.65
SHROOM1-201ENST00000319854 CXCL5P42830 114 aa10.97□□□□□ -0.65
SHROOM1-201ENST00000319854 UBE2L6O14933 153 aa10.97□□□□□ -0.65
SHROOM1-201ENST00000319854 HIST1H4AP62805 103 aaKnown RBP10.97□□□□□ -0.65
SHROOM1-201ENST00000319854 LINC00242Q5T6M2 205 aa10.97□□□□□ -0.65
SHROOM1-201ENST00000319854 KIR2DL5BQ8NHK3 375 aa10.97□□□□□ -0.65
SHROOM1-201ENST00000319854 IGLV5-39A0A0G2JS06 123 aa10.96□□□□□ -0.65
SHROOM1-201ENST00000319854 J3KT08 172 aa10.96□□□□□ -0.65
SHROOM1-201ENST00000319854 STAB1Q9NY15 2570 aa10.96□□□□□ -0.65
SHROOM1-201ENST00000319854 PLAC8L1A1L4L8 177 aa10.96□□□□□ -0.66
SHROOM1-201ENST00000319854 CRYGAP11844 174 aa10.96□□□□□ -0.66
SHROOM1-201ENST00000319854 IGKV3D-7A0A0C4DH55 119 aa10.95□□□□□ -0.66
SHROOM1-201ENST00000319854 ATP5G1P05496 136 aa10.95□□□□□ -0.66
SHROOM1-201ENST00000319854 IL17DQ8TAD2 202 aa10.95□□□□□ -0.66
SHROOM1-201ENST00000319854 C16orf74Q96GX8 76 aa10.94□□□□□ -0.66
SHROOM1-201ENST00000319854 A0A087WVE0 104 aa10.94□□□□□ -0.66
SHROOM1-201ENST00000319854 SMIM1B2RUZ4 78 aa10.94□□□□□ -0.66
SHROOM1-201ENST00000319854 MALP21145 153 aa10.94□□□□□ -0.66
SHROOM1-201ENST00000319854 MAST4O15021 2626 aa10.94□□□□□ -0.66
SHROOM1-201ENST00000319854 A0A1B0GX51 115 aa10.93□□□□□ -0.66
SHROOM1-201ENST00000319854 PRIMA1Q86XR5 153 aa10.93□□□□□ -0.66
SHROOM1-201ENST00000319854 CSNK1G2-AS1Q8NCQ2 148 aa10.93□□□□□ -0.66
SHROOM1-201ENST00000319854 TOMM7Q9P0U1 55 aa10.93□□□□□ -0.66
SHROOM1-201ENST00000319854 OR13C6PQ8NH95 151 aa10.92□□□□□ -0.66
SHROOM1-201ENST00000319854 C14orf132Q9NPU4 83 aa10.92□□□□□ -0.66
SHROOM1-201ENST00000319854 FAM222AQ5U5X8 452 aa10.91□□□□□ -0.66
SHROOM1-201ENST00000319854 A0A087WYN8 130 aa10.91□□□□□ -0.66
SHROOM1-201ENST00000319854 OXTP01178 125 aa10.91□□□□□ -0.66
SHROOM1-201ENST00000319854 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
SHROOM1-201ENST00000319854 ATOX1O00244 68 aa10.91□□□□□ -0.66
SHROOM1-201ENST00000319854 PKD1L1Q8TDX9 2849 aa10.91□□□□□ -0.66
SHROOM1-201ENST00000319854 INAFM2P0DMQ5 153 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 CLPSL2Q6UWE3 100 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 LINC00337Q8N6G1 96 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 LINC00846Q9NV44 126 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 NOTCH1P46531 2555 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 WIPF1O43516 503 aa10.9□□□□□ -0.66
SHROOM1-201ENST00000319854 F5H768 121 aa10.89□□□□□ -0.67
SHROOM1-201ENST00000319854 RPL18AQ02543 176 aaKnown RBP10.89□□□□□ -0.67
SHROOM1-201ENST00000319854 DEFB135Q30KP9 77 aa10.89□□□□□ -0.67
SHROOM1-201ENST00000319854 C11orf68Q9H3H3 251 aaKnown RBP10.89□□□□□ -0.67
SHROOM1-201ENST00000319854 CDC42SE2Q9NRR3 84 aa10.89□□□□□ -0.67
SHROOM1-201ENST00000319854 IGLV4-60A0A075B6I1 120 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 CMC4P56277 68 aaPredicted RBP10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 DPH3Q96FX2 82 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 LINC01561Q8N1V8 128 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 DSCR8Q96T75 97 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
SHROOM1-201ENST00000319854 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
SHROOM1-201ENST00000319854 FHL2Q14192 279 aa10.87□□□□□ -0.67
SHROOM1-201ENST00000319854 RPL28P46779 137 aaKnown RBP10.87□□□□□ -0.67
SHROOM1-201ENST00000319854 FBN1P35555 2871 aaKnown RBP10.87□□□□□ -0.67
SHROOM1-201ENST00000319854 DNAL4O96015 105 aa10.86□□□□□ -0.67
SHROOM1-201ENST00000319854 GYPEP15421 78 aa10.85□□□□□ -0.67
SHROOM1-201ENST00000319854 SMIM11BQ8TCY0 68 aa10.85□□□□□ -0.67
SHROOM1-201ENST00000319854 NCR3O14931 201 aa10.85□□□□□ -0.67
SHROOM1-201ENST00000319854 SLPIP03973 132 aa10.84□□□□□ -0.67
SHROOM1-201ENST00000319854 HTN3P15516 51 aa10.84□□□□□ -0.67
SHROOM1-201ENST00000319854 HRCT1Q6UXD1 115 aa10.84□□□□□ -0.67
SHROOM1-201ENST00000319854 MIR7-3HGQ8N6C7 128 aa10.84□□□□□ -0.67
SHROOM1-201ENST00000319854 TRBV6-4A0A1B0GX49 114 aa10.83□□□□□ -0.68
SHROOM1-201ENST00000319854 C4orf26Q17RF5 130 aa10.83□□□□□ -0.68
SHROOM1-201ENST00000319854 SERP2Q8N6R1 65 aa10.83□□□□□ -0.68
SHROOM1-201ENST00000319854 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
SHROOM1-201ENST00000319854 CRPP02741 224 aa10.83□□□□□ -0.68
SHROOM1-201ENST00000319854 TRBV6-8A0A0A6YYG3 113 aa10.82□□□□□ -0.68
SHROOM1-201ENST00000319854 OVOL2Q9BRP0 275 aa10.82□□□□□ -0.68
SHROOM1-201ENST00000319854 TRAV13-2A0A0B4J235 113 aa10.82□□□□□ -0.68
SHROOM1-201ENST00000319854 SND1-IT1Q9HBX3 110 aa10.82□□□□□ -0.68
SHROOM1-201ENST00000319854 USP17L23D6RBM5 183 aa10.81□□□□□ -0.68
SHROOM1-201ENST00000319854 Q6JHZ5 121 aa10.81□□□□□ -0.68
SHROOM1-201ENST00000319854 FAM19A3Q7Z5A8 133 aa10.81□□□□□ -0.68
SHROOM1-201ENST00000319854 OBSCN-AS1Q96MR7 158 aa10.81□□□□□ -0.68
SHROOM1-201ENST00000319854 LECT2O14960 151 aa10.81□□□□□ -0.68
SHROOM1-201ENST00000319854 XCL1P47992 114 aa10.81□□□□□ -0.68
SHROOM1-201ENST00000319854 Q8N3U1 123 aa10.8□□□□□ -0.68
SHROOM1-201ENST00000319854 WFDC9Q8NEX5 89 aa10.8□□□□□ -0.68
SHROOM1-201ENST00000319854 TMEM258P61165 79 aa10.8□□□□□ -0.68
SHROOM1-201ENST00000319854 X6R8D5 127 aa10.8□□□□□ -0.68
SHROOM1-201ENST00000319854 COL6A5A8TX70 2615 aa10.79□□□□□ -0.68
SHROOM1-201ENST00000319854 PFN2P35080 140 aa10.79□□□□□ -0.68
SHROOM1-201ENST00000319854 IGLV10-54A0A075B6I4 117 aa10.78□□□□□ -0.68
SHROOM1-201ENST00000319854 CCL18P55774 89 aa10.77□□□□□ -0.68
SHROOM1-201ENST00000319854 SS18Q15532 418 aa10.77□□□□□ -0.68
SHROOM1-201ENST00000319854 Q5XG85 94 aa10.77□□□□□ -0.69
SHROOM1-201ENST00000319854 LINC00158P58513 81 aa10.77□□□□□ -0.69
SHROOM1-201ENST00000319854 PAX4O43316 350 aa10.76□□□□□ -0.69
SHROOM1-201ENST00000319854 C9orf66Q5T8R8 295 aa10.76□□□□□ -0.69
SHROOM1-201ENST00000319854 COX7B2Q8TF08 81 aa10.75□□□□□ -0.69
SHROOM1-201ENST00000319854 TENM3Q9P273 2699 aa10.75□□□□□ -0.69
SHROOM1-201ENST00000319854 IGHV4-28A0A0C4DH34 117 aa10.74□□□□□ -0.69
SHROOM1-201ENST00000319854 CELA1Q9UNI1 258 aa10.74□□□□□ -0.69
SHROOM1-201ENST00000319854 PRO0255Q9UI72 69 aa10.73□□□□□ -0.69
SHROOM1-201ENST00000319854 NBEAL1Q6ZS30 2694 aa10.73□□□□□ -0.69
SHROOM1-201ENST00000319854 FAM19A1Q7Z5A9 133 aa10.73□□□□□ -0.69
SHROOM1-201ENST00000319854 TRAV23DV6A0A075B6W5 121 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms