RNA–Protein interactions for RNA: ENST00000302536.2

VAT1L-201, Transcript of vesicle amine transport 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAT1L, Length 3,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1L-201ENST00000302536 SNURFQ9Y675 71 aa9.27□□□□□ -0.93
VAT1L-201ENST00000302536 NSD1Q96L73 2696 aaPredicted RBP9.26□□□□□ -0.93
VAT1L-201ENST00000302536 KRTAP1-1Q07627 177 aa9.26□□□□□ -0.93
VAT1L-201ENST00000302536 ENHOQ6UWT2 76 aa9.26□□□□□ -0.93
VAT1L-201ENST00000302536 TENM1Q9UKZ4 2725 aa9.26□□□□□ -0.93
VAT1L-201ENST00000302536 TMEM89A2RUT3 159 aa9.26□□□□□ -0.93
VAT1L-201ENST00000302536 ODF3L2Q3SX64 289 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 UBL5Q9BZL1 73 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 CYSTM1Q9H1C7 97 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 INSP01308 110 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 COX6A2Q02221 97 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 MPLKIPQ8TAP9 179 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 COX7B2Q8TF08 81 aa9.25□□□□□ -0.93
VAT1L-201ENST00000302536 HILS1P60008 231 aa9.24□□□□□ -0.93
VAT1L-201ENST00000302536 TRAV13-2A0A0B4J235 113 aa9.24□□□□□ -0.93
VAT1L-201ENST00000302536 FAM240AA0A1B0GVK7 77 aa9.24□□□□□ -0.93
VAT1L-201ENST00000302536 PRR3P79522 188 aaKnown RBP9.24□□□□□ -0.93
VAT1L-201ENST00000302536 NOTCH1P46531 2555 aa9.24□□□□□ -0.93
VAT1L-201ENST00000302536 BRK1Q8WUW1 75 aa9.23□□□□□ -0.93
VAT1L-201ENST00000302536 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
VAT1L-201ENST00000302536 FAM19A4Q96LR4 140 aa9.23□□□□□ -0.93
VAT1L-201ENST00000302536 DEFB4AO15263 64 aa9.23□□□□□ -0.93
VAT1L-201ENST00000302536 Q6ZSN1 163 aa9.23□□□□□ -0.93
VAT1L-201ENST00000302536 IGHV4-28A0A0C4DH34 117 aa9.22□□□□□ -0.93
VAT1L-201ENST00000302536 Q6ZTI0 123 aa9.22□□□□□ -0.93
VAT1L-201ENST00000302536 IMUPQ9GZP8 106 aa9.22□□□□□ -0.93
VAT1L-201ENST00000302536 CXCL5P42830 114 aa9.21□□□□□ -0.93
VAT1L-201ENST00000302536 DPH3Q96FX2 82 aa9.21□□□□□ -0.94
VAT1L-201ENST00000302536 RPL18AQ02543 176 aaKnown RBP9.21□□□□□ -0.94
VAT1L-201ENST00000302536 LINC00482Q8N8I6 264 aa9.21□□□□□ -0.94
VAT1L-201ENST00000302536 ORMDL1Q9P0S3 153 aa9.21□□□□□ -0.94
VAT1L-201ENST00000302536 LOC100131303A0A0U1RQF7 123 aa9.2□□□□□ -0.94
VAT1L-201ENST00000302536 SPATA3Q8NHX4 192 aa9.2□□□□□ -0.94
VAT1L-201ENST00000302536 COL6A5A8TX70 2615 aa9.2□□□□□ -0.94
VAT1L-201ENST00000302536 A0A087WYN8 130 aa9.19□□□□□ -0.94
VAT1L-201ENST00000302536 LINC00315P59091 139 aa9.19□□□□□ -0.94
VAT1L-201ENST00000302536 SERP2Q8N6R1 65 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 FAM19A1Q7Z5A9 133 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 C9orf85Q96MD7 179 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 KIF25-AS1Q9Y6Z4 181 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 LRCOL1A6NCL2 159 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 SMIM11BQ8TCY0 68 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 FAM218AQ96MZ4 157 aa9.18□□□□□ -0.94
VAT1L-201ENST00000302536 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
VAT1L-201ENST00000302536 UBE2D4Q9Y2X8 147 aa9.17□□□□□ -0.94
VAT1L-201ENST00000302536 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
VAT1L-201ENST00000302536 A8MTW9 85 aa9.16□□□□□ -0.94
VAT1L-201ENST00000302536 MED14OSP0DP75 135 aa9.16□□□□□ -0.94
VAT1L-201ENST00000302536 TMEM258P61165 79 aa9.16□□□□□ -0.94
VAT1L-201ENST00000302536 LITAFQ99732 161 aa9.16□□□□□ -0.94
VAT1L-201ENST00000302536 MRPS36P82909 103 aaKnown RBP9.15□□□□□ -0.94
VAT1L-201ENST00000302536 UPK3BQ9BT76 320 aa9.15□□□□□ -0.94
VAT1L-201ENST00000302536 PYGO1Q9Y3Y4 419 aa9.15□□□□□ -0.94
VAT1L-201ENST00000302536 ANGP03950 147 aaKnown RBP9.15□□□□□ -0.94
VAT1L-201ENST00000302536 KRTAP10-3P60369 221 aa9.15□□□□□ -0.94
VAT1L-201ENST00000302536 C1orf158Q8N1D5 194 aa9.15□□□□□ -0.94
VAT1L-201ENST00000302536 LINC00242Q5T6M2 205 aa9.15□□□□□ -0.95
VAT1L-201ENST00000302536 CRYGAP11844 174 aa9.14□□□□□ -0.95
VAT1L-201ENST00000302536 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
VAT1L-201ENST00000302536 SPANXCQ9NY87 97 aa9.14□□□□□ -0.95
VAT1L-201ENST00000302536 TRBV6-5A0A0K0K1A5 114 aa9.14□□□□□ -0.95
VAT1L-201ENST00000302536 NDUFA1O15239 70 aa9.14□□□□□ -0.95
VAT1L-201ENST00000302536 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
VAT1L-201ENST00000302536 SOSTDC1Q6X4U4 206 aa9.13□□□□□ -0.95
VAT1L-201ENST00000302536 PRR4Q16378 134 aa9.13□□□□□ -0.95
VAT1L-201ENST00000302536 BAHCC1Q9P281 2608 aa9.12□□□□□ -0.95
VAT1L-201ENST00000302536 C9orf129Q5T035 196 aaKnown RBP9.12□□□□□ -0.95
VAT1L-201ENST00000302536 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.12□□□□□ -0.95
VAT1L-201ENST00000302536 MGAM2Q2M2H8 2515 aa9.11□□□□□ -0.95
VAT1L-201ENST00000302536 SS18Q15532 418 aa9.11□□□□□ -0.95
VAT1L-201ENST00000302536 OXTP01178 125 aa9.11□□□□□ -0.95
VAT1L-201ENST00000302536 K7EQD1 137 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 DEFB135Q30KP9 77 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 C9orf116Q5BN46 136 aaPredicted RBP9.1□□□□□ -0.95
VAT1L-201ENST00000302536 OVOL2Q9BRP0 275 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 FHL2Q14192 279 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 LINC00337Q8N6G1 96 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 C2orf48Q96LS8 159 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 SMIM1B2RUZ4 78 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 CCL18P55774 89 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 CHCHD7Q9BUK0 85 aa9.1□□□□□ -0.95
VAT1L-201ENST00000302536 FAM236DA0A1B0GTK5 79 aa9.09□□□□□ -0.95
VAT1L-201ENST00000302536 FAM236CP0DP71 79 aa9.09□□□□□ -0.95
VAT1L-201ENST00000302536 C6orf99Q4VX62 202 aa9.09□□□□□ -0.95
VAT1L-201ENST00000302536 H0YGX0 51 aa9.09□□□□□ -0.95
VAT1L-201ENST00000302536 XAGE1AQ9HD64 81 aa9.09□□□□□ -0.95
VAT1L-201ENST00000302536 LINC00336Q6ZUF6 198 aa9.08□□□□□ -0.96
VAT1L-201ENST00000302536 GYPEP15421 78 aa9.07□□□□□ -0.96
VAT1L-201ENST00000302536 C11orf72Q8NBR9 251 aa9.07□□□□□ -0.96
VAT1L-201ENST00000302536 AKAP9Q99996 3911 aa9.07□□□□□ -0.96
VAT1L-201ENST00000302536 IGLV1-51P01701 117 aa9.07□□□□□ -0.96
VAT1L-201ENST00000302536 DEFB121Q5J5C9 76 aa9.07□□□□□ -0.96
VAT1L-201ENST00000302536 RPS28P62857 69 aaKnown RBP9.07□□□□□ -0.96
VAT1L-201ENST00000302536 TRRAPQ9Y4A5 3859 aa9.06□□□□□ -0.96
VAT1L-201ENST00000302536 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
VAT1L-201ENST00000302536 RMI2Q96E14 147 aa9.05□□□□□ -0.96
VAT1L-201ENST00000302536 FBN1P35555 2871 aaKnown RBP9.05□□□□□ -0.96
VAT1L-201ENST00000302536 IGLV4-60A0A075B6I1 120 aa9.04□□□□□ -0.96
VAT1L-201ENST00000302536 F8WEM9 126 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms