RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 FAM104AQ969W3 186 aa10.9□□□□□ -0.66
USP25-201ENST00000285679 UNC79Q9P2D8 2635 aa10.9□□□□□ -0.66
USP25-201ENST00000285679 IGLV5-39A0A0G2JS06 123 aa10.89□□□□□ -0.67
USP25-201ENST00000285679 ODF3L2Q3SX64 289 aa10.89□□□□□ -0.67
USP25-201ENST00000285679 C11orf72Q8NBR9 251 aa10.89□□□□□ -0.67
USP25-201ENST00000285679 C9orf116Q5BN46 136 aaPredicted RBP10.89□□□□□ -0.67
USP25-201ENST00000285679 C1orf158Q8N1D5 194 aa10.89□□□□□ -0.67
USP25-201ENST00000285679 SERP2Q8N6R1 65 aa10.89□□□□□ -0.67
USP25-201ENST00000285679 RPL28P46779 137 aaKnown RBP10.88□□□□□ -0.67
USP25-201ENST00000285679 C9orf129Q5T035 196 aaKnown RBP10.88□□□□□ -0.67
USP25-201ENST00000285679 DSCR9P59020 149 aa10.88□□□□□ -0.67
USP25-201ENST00000285679 LINC00269Q8N2A0 174 aa10.88□□□□□ -0.67
USP25-201ENST00000285679 CSDC2Q9Y534 153 aaKnown RBP10.88□□□□□ -0.67
USP25-201ENST00000285679 IGHV4-28A0A0C4DH34 117 aa10.88□□□□□ -0.67
USP25-201ENST00000285679 CELSR2Q9HCU4 2923 aa10.87□□□□□ -0.67
USP25-201ENST00000285679 F5H768 121 aa10.87□□□□□ -0.67
USP25-201ENST00000285679 SNURFQ9Y675 71 aa10.87□□□□□ -0.67
USP25-201ENST00000285679 DEFB105AQ8NG35 78 aa10.87□□□□□ -0.67
USP25-201ENST00000285679 BRI3O95415 125 aa10.86□□□□□ -0.67
USP25-201ENST00000285679 HRCT1Q6UXD1 115 aa10.86□□□□□ -0.67
USP25-201ENST00000285679 FAM19A1Q7Z5A9 133 aa10.86□□□□□ -0.67
USP25-201ENST00000285679 SMIM9A6NGZ8 99 aa10.86□□□□□ -0.67
USP25-201ENST00000285679 RBM3P98179 157 aaKnown RBP10.85□□□□□ -0.67
USP25-201ENST00000285679 C6orf99Q4VX62 202 aa10.85□□□□□ -0.67
USP25-201ENST00000285679 UPK3BQ9BT76 320 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 XAGE1AQ9HD64 81 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 TRBV6-8A0A0A6YYG3 113 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 C5orf47Q569G3 176 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 DEFB121Q5J5C9 76 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 IBA57-AS1B1ANH7 110 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 FAM222AQ5U5X8 452 aa10.84□□□□□ -0.67
USP25-201ENST00000285679 UBR5O95071 2799 aaPredicted RBP10.83□□□□□ -0.68
USP25-201ENST00000285679 IGLV5-45A0A087WSX0 123 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 C4orf3Q8WVX3 66 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 Q6YL49 198 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 C1orf43Q9BWL3 253 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 C16orf74Q96GX8 76 aa10.83□□□□□ -0.68
USP25-201ENST00000285679 BEAN1Q3B7T3 259 aa10.82□□□□□ -0.68
USP25-201ENST00000285679 J3QLI3 93 aa10.82□□□□□ -0.68
USP25-201ENST00000285679 MRAPQ8TCY5 172 aa10.82□□□□□ -0.68
USP25-201ENST00000285679 JMJD7-PLA2G4BH0Y9G9 81 aa10.81□□□□□ -0.68
USP25-201ENST00000285679 TMEM256-PLSCR3K7ERE1 68 aa10.8□□□□□ -0.68
USP25-201ENST00000285679 Q6JHZ5 121 aa10.8□□□□□ -0.68
USP25-201ENST00000285679 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
USP25-201ENST00000285679 TMEM258P61165 79 aa10.79□□□□□ -0.68
USP25-201ENST00000285679 DEFB135Q30KP9 77 aa10.78□□□□□ -0.68
USP25-201ENST00000285679 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.685e-6■■■■■ 32.2
USP25-201ENST00000285679 LINC00482Q8N8I6 264 aa10.77□□□□□ -0.68
USP25-201ENST00000285679 TRBV6-4A0A1B0GX49 114 aa10.77□□□□□ -0.69
USP25-201ENST00000285679 KLK12Q9UKR0 248 aa10.77□□□□□ -0.69
USP25-201ENST00000285679 PKIGQ9Y2B9 76 aa10.77□□□□□ -0.69
USP25-201ENST00000285679 A0A0U1RQV1 116 aa10.76□□□□□ -0.69
USP25-201ENST00000285679 KRTAP10-9P60411 292 aa10.76□□□□□ -0.69
USP25-201ENST00000285679 NBEAL1Q6ZS30 2694 aa10.76□□□□□ -0.69
USP25-201ENST00000285679 MPLKIPQ8TAP9 179 aa10.76□□□□□ -0.69
USP25-201ENST00000285679 MXRA5Q9NR99 2828 aa10.76□□□□□ -0.69
USP25-201ENST00000285679 C4orf26Q17RF5 130 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 MGAM2Q2M2H8 2515 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 CCKP06307 115 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 IGHV4-31P0DP07 118 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 CRYGAP11844 174 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 HIGD2BQ4VC39 106 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 CYSTM1Q9H1C7 97 aa10.75□□□□□ -0.69
USP25-201ENST00000285679 TEP1Q99973 2627 aaKnown RBP10.74□□□□□ -0.69
USP25-201ENST00000285679 IGHV3OR16-9A0A0B4J2B5 98 aa10.74□□□□□ -0.69
USP25-201ENST00000285679 BBC3Q96PG8 261 aaPredicted RBP10.74□□□□□ -0.69
USP25-201ENST00000285679 IGSF10Q6WRI0 2623 aa10.74□□□□□ -0.69
USP25-201ENST00000285679 Q6ZQY7 126 aa10.74□□□□□ -0.69
USP25-201ENST00000285679 A0A087WZ39 114 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 LINC01561Q8N1V8 128 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 APCP25054 2843 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 CSMD2Q7Z408 3487 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 FAM236DA0A1B0GTK5 79 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 FAM236CP0DP71 79 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 Q8N814 137 aa10.73□□□□□ -0.69
USP25-201ENST00000285679 CHCHD10Q8WYQ3 142 aaPredicted RBP10.73□□□□□ -0.69
USP25-201ENST00000285679 Q8N3U1 123 aa10.72□□□□□ -0.69
USP25-201ENST00000285679 DPH3Q96FX2 82 aa10.72□□□□□ -0.69
USP25-201ENST00000285679 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
USP25-201ENST00000285679 DNAJC9-AS1A6NH13 148 aa10.71□□□□□ -0.7
USP25-201ENST00000285679 ZNF561-AS1K7EIQ3 104 aa10.7□□□□□ -0.7
USP25-201ENST00000285679 ZNF843Q8N446 348 aa10.7□□□□□ -0.7
USP25-201ENST00000285679 ZFHX3Q15911 3703 aa10.7□□□□□ -0.7
USP25-201ENST00000285679 LRCOL1A6NCL2 159 aa10.7□□□□□ -0.7
USP25-201ENST00000285679 SETXQ7Z333 2677 aaKnown RBP10.7□□□□□ -0.7
USP25-201ENST00000285679 REG3AQ06141 175 aa10.69□□□□□ -0.7
USP25-201ENST00000285679 CMC4P56277 68 aaPredicted RBP10.69□□□□□ -0.7
USP25-201ENST00000285679 FHL2Q14192 279 aa10.69□□□□□ -0.7
USP25-201ENST00000285679 C6orf223Q8N319 242 aa10.69□□□□□ -0.7
USP25-201ENST00000285679 BRK1Q8WUW1 75 aa10.68□□□□□ -0.7
USP25-201ENST00000285679 NOTCH1P46531 2555 aa10.68□□□□□ -0.7
USP25-201ENST00000285679 PRR4Q16378 134 aa10.68□□□□□ -0.7
USP25-201ENST00000285679 LINC01600Q96MT4 127 aa10.68□□□□□ -0.7
USP25-201ENST00000285679 UNQ6190/PRO20217Q6UXQ8 127 aa10.67□□□□□ -0.7
USP25-201ENST00000285679 C3orf84H3BNL1 204 aa10.67□□□□□ -0.7
USP25-201ENST00000285679 PRO0255Q9UI72 69 aa10.67□□□□□ -0.7
USP25-201ENST00000285679 BAHCC1Q9P281 2608 aa10.67□□□□□ -0.7
USP25-201ENST00000285679 Q8N9L7 120 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms