RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TRBV20-1A0A075B6N2 111 aa6.52□□□□□ -1.37
TRIM55-201ENST00000276573 IBA57-AS1B1ANH7 110 aa6.52□□□□□ -1.37
TRIM55-201ENST00000276573 FOXI1Q12951 378 aa6.52□□□□□ -1.37
TRIM55-201ENST00000276573 TRBV30A0A0K0K1B3 111 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 TCL1BO95988 128 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 LINC00158P58513 81 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 WFDC2Q14508 124 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 KIAA0087Q14695 138 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 Q1RN00 199 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 ESRGQ1W209 222 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 ENHOQ6UWT2 76 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 MDFIQ99750 246 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 PRO0461Q9UI25 63 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 OCIAD2Q56VL3 154 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 MIR7-3HGQ8N6C7 128 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 MRAPQ8TCY5 172 aa6.51□□□□□ -1.37
TRIM55-201ENST00000276573 GAGE12HA6NDE8 117 aa6.5□□□□□ -1.37
TRIM55-201ENST00000276573 DNAH3Q8TD57 4116 aa6.5□□□□□ -1.37
TRIM55-201ENST00000276573 MALP21145 153 aa6.49□□□□□ -1.37
TRIM55-201ENST00000276573 RPL13AP40429 203 aaKnown RBP6.49□□□□□ -1.37
TRIM55-201ENST00000276573 WFDC10BQ8IUB3 73 aa6.49□□□□□ -1.37
TRIM55-201ENST00000276573 TRIAP1O43715 76 aa6.49□□□□□ -1.37
TRIM55-201ENST00000276573 PFN2P35080 140 aa6.49□□□□□ -1.37
TRIM55-201ENST00000276573 CKS1BP61024 79 aa6.49□□□□□ -1.37
TRIM55-201ENST00000276573 C2orf82Q6UX34 121 aa6.49□□□□□ -1.37
TRIM55-201ENST00000276573 KLK5Q9Y337 293 aaPredicted RBP6.49□□□□□ -1.37
TRIM55-201ENST00000276573 TRAV10A0A0B4J240 114 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 TRAV8-4A0A0B4J246 113 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 CFAP161Q6P656 301 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 CXCL5P42830 114 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 CCL18P55774 89 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 UBE2WQ96B02 151 aa6.48□□□□□ -1.37
TRIM55-201ENST00000276573 K7ERU9 68 aa6.47□□□□□ -1.37
TRIM55-201ENST00000276573 CRPP02741 224 aa6.47□□□□□ -1.37
TRIM55-201ENST00000276573 COX6CP09669 75 aa6.47□□□□□ -1.37
TRIM55-201ENST00000276573 SMCPP49901 116 aaPredicted RBP6.47□□□□□ -1.37
TRIM55-201ENST00000276573 SND1-IT1Q9HBX3 110 aa6.47□□□□□ -1.37
TRIM55-201ENST00000276573 TENM3Q9P273 2699 aa6.46□□□□□ -1.37
TRIM55-201ENST00000276573 COX17Q14061 63 aa6.46□□□□□ -1.38
TRIM55-201ENST00000276573 ATXN8Q156A1 80 aa6.46□□□□□ -1.38
TRIM55-201ENST00000276573 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
TRIM55-201ENST00000276573 IGKV2-28A0A075B6P5 120 aa6.45□□□□□ -1.38
TRIM55-201ENST00000276573 TRAV13-2A0A0B4J235 113 aa6.45□□□□□ -1.38
TRIM55-201ENST00000276573 IGKV2D-28P01615 120 aa6.45□□□□□ -1.38
TRIM55-201ENST00000276573 LINC01556Q5JQF7 62 aa6.45□□□□□ -1.38
TRIM55-201ENST00000276573 KRTAP26-1Q6PEX3 210 aa6.45□□□□□ -1.38
TRIM55-201ENST00000276573 C15orf53Q8NAA6 179 aa6.45□□□□□ -1.38
TRIM55-201ENST00000276573 NOTCH1P46531 2555 aa6.44□□□□□ -1.38
TRIM55-201ENST00000276573 SPAG11BQ08648 103 aa6.44□□□□□ -1.38
TRIM55-201ENST00000276573 C6orf223Q8N319 242 aa6.44□□□□□ -1.38
TRIM55-201ENST00000276573 LINC01620Q4KN68 170 aa6.44□□□□□ -1.38
TRIM55-201ENST00000276573 UNQ6190/PRO20217Q6UXQ8 127 aa6.44□□□□□ -1.38
TRIM55-201ENST00000276573 LINC00337Q8N6G1 96 aa6.44□□□□□ -1.38
TRIM55-201ENST00000276573 C9JAW5 83 aa6.43□□□□□ -1.38
TRIM55-201ENST00000276573 C9orf116Q5BN46 136 aaPredicted RBP6.43□□□□□ -1.38
TRIM55-201ENST00000276573 C10orf25Q5T742 122 aa6.43□□□□□ -1.38
TRIM55-201ENST00000276573 LINC00526Q96FQ7 95 aa6.43□□□□□ -1.38
TRIM55-201ENST00000276573 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 CLEC2BQ92478 149 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 ANK2Q01484 3957 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 M0QXV9 152 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 LST1O00453 97 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 SLC25A20O43772 301 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 DNAH10OSP0CZ25 163 aa6.42□□□□□ -1.38
TRIM55-201ENST00000276573 NTN5Q8WTR8 489 aaPredicted RBP6.42□□□□□ -1.38
TRIM55-201ENST00000276573 NBEAL1Q6ZS30 2694 aa6.41□□□□□ -1.38
TRIM55-201ENST00000276573 RPL28P46779 137 aaKnown RBP6.41□□□□□ -1.38
TRIM55-201ENST00000276573 LINC01600Q96MT4 127 aa6.41□□□□□ -1.38
TRIM55-201ENST00000276573 LINC00588Q9Y4M8 146 aa6.41□□□□□ -1.38
TRIM55-201ENST00000276573 TRBV10-2A0A0K0K1G8 114 aa6.4□□□□□ -1.38
TRIM55-201ENST00000276573 GVQW2A0A096LPI5 108 aaPredicted RBP6.4□□□□□ -1.39
TRIM55-201ENST00000276573 NDUFC2O95298 119 aa6.4□□□□□ -1.39
TRIM55-201ENST00000276573 TEN1Q86WV5 123 aa6.4□□□□□ -1.39
TRIM55-201ENST00000276573 MUC7Q8TAX7 377 aa6.4□□□□□ -1.39
TRIM55-201ENST00000276573 C1orf43Q9BWL3 253 aa6.4□□□□□ -1.39
TRIM55-201ENST00000276573 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
TRIM55-201ENST00000276573 OR13C6PQ8NH95 151 aa6.39□□□□□ -1.39
TRIM55-201ENST00000276573 SMIM11BQ8TCY0 68 aa6.39□□□□□ -1.39
TRIM55-201ENST00000276573 B9D2Q9BPU9 175 aa6.39□□□□□ -1.39
TRIM55-201ENST00000276573 J3QR89 54 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 ZNF561-AS1K7EIQ3 104 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 PRR3P79522 188 aaKnown RBP6.38□□□□□ -1.39
TRIM55-201ENST00000276573 CARD19Q96LW7 228 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 VPS25Q9BRG1 176 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 C6orf48Q9UBA6 75 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 IGKV2D-24A0A075B6R9 120 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 HIGD2BQ4VC39 106 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 C15orf56Q8N910 161 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 PPDPFLQ8WWR9 84 aa6.38□□□□□ -1.39
TRIM55-201ENST00000276573 MGAM2Q2M2H8 2515 aa6.37□□□□□ -1.39
TRIM55-201ENST00000276573 H3BT86 120 aa6.37□□□□□ -1.39
TRIM55-201ENST00000276573 C2orf48Q96LS8 159 aa6.37□□□□□ -1.39
TRIM55-201ENST00000276573 CAMK2N2Q96S95 79 aa6.37□□□□□ -1.39
TRIM55-201ENST00000276573 CBY1Q9Y3M2 126 aa6.37□□□□□ -1.39
TRIM55-201ENST00000276573 H0YGX0 51 aa6.36□□□□□ -1.39
TRIM55-201ENST00000276573 TRACP01848 142 aa6.36□□□□□ -1.39
TRIM55-201ENST00000276573 Q8NDZ9 215 aa6.36□□□□□ -1.39
TRIM55-201ENST00000276573 FAM218AQ96MZ4 157 aa6.36□□□□□ -1.39
TRIM55-201ENST00000276573 UPK3BQ9BT76 320 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms