RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 A0A0U1RRA0 63 aa8.14□□□□□ -1.11
SDE2-201ENST00000272091 STAB2Q8WWQ8 2551 aa8.14□□□□□ -1.11
SDE2-201ENST00000272091 TMEM238LA0A1B0GVL6 79 aa8.13□□□□□ -1.11
SDE2-201ENST00000272091 A6NJY4 79 aa8.13□□□□□ -1.11
SDE2-201ENST00000272091 APOMO95445 188 aa8.13□□□□□ -1.11
SDE2-201ENST00000272091 C2orf82Q6UX34 121 aa8.13□□□□□ -1.11
SDE2-201ENST00000272091 DNAH10OSP0CZ25 163 aa8.13□□□□□ -1.11
SDE2-201ENST00000272091 KRTAP21-3Q3LHN1 58 aa8.13□□□□□ -1.11
SDE2-201ENST00000272091 A0A1W2PPM0 123 aa8.12□□□□□ -1.11
SDE2-201ENST00000272091 LINC00308Q8TCZ7 52 aa8.12□□□□□ -1.11
SDE2-201ENST00000272091 PRSS2P07478 247 aa8.12□□□□□ -1.11
SDE2-201ENST00000272091 RPL24P83731 157 aaKnown RBP8.12□□□□□ -1.11
SDE2-201ENST00000272091 VAMP3Q15836 100 aa8.12□□□□□ -1.11
SDE2-201ENST00000272091 TSPAN13O95857 204 aa8.11□□□□□ -1.11
SDE2-201ENST00000272091 CRPP02741 224 aa8.11□□□□□ -1.11
SDE2-201ENST00000272091 MEIG1Q5JSS6 88 aa8.11□□□□□ -1.11
SDE2-201ENST00000272091 TRAV8-4A0A0B4J246 113 aa8.11□□□□□ -1.11
SDE2-201ENST00000272091 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
SDE2-201ENST00000272091 A0A0B4J2C4 111 aa8.1□□□□□ -1.11
SDE2-201ENST00000272091 C6orf226Q5I0X4 101 aa8.1□□□□□ -1.11
SDE2-201ENST00000272091 KLK5Q9Y337 293 aaPredicted RBP8.1□□□□□ -1.11
SDE2-201ENST00000272091 K7EP34 96 aa8.1□□□□□ -1.11
SDE2-201ENST00000272091 IFITM1P13164 125 aa8.1□□□□□ -1.11
SDE2-201ENST00000272091 CIRBPQ14011 172 aaKnown RBP8.1□□□□□ -1.11
SDE2-201ENST00000272091 C6orf223Q8N319 242 aa8.1□□□□□ -1.11
SDE2-201ENST00000272091 PLECQ15149 4684 aaKnown RBP8.1□□□□□ -1.11
SDE2-201ENST00000272091 NHLRC4P0CG21 123 aaPredicted RBP8.1□□□□□ -1.11
SDE2-201ENST00000272091 MALP21145 153 aa8.1□□□□□ -1.11
SDE2-201ENST00000272091 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
SDE2-201ENST00000272091 STARD9Q9P2P6 4700 aa8.09□□□□□ -1.11
SDE2-201ENST00000272091 LINC00526Q96FQ7 95 aa8.09□□□□□ -1.11
SDE2-201ENST00000272091 UPK3BQ9BT76 320 aa8.09□□□□□ -1.11
SDE2-201ENST00000272091 PRO0461Q9UI25 63 aa8.09□□□□□ -1.11
SDE2-201ENST00000272091 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
SDE2-201ENST00000272091 MIR7-3HGQ8N6C7 128 aa8.08□□□□□ -1.12
SDE2-201ENST00000272091 C10orf25Q5T742 122 aa8.08□□□□□ -1.12
SDE2-201ENST00000272091 PRO1854Q9UHT4 67 aa8.08□□□□□ -1.12
SDE2-201ENST00000272091 ERG28Q9UKR5 140 aa8.08□□□□□ -1.12
SDE2-201ENST00000272091 CCL18P55774 89 aa8.07□□□□□ -1.12
SDE2-201ENST00000272091 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.07□□□□□ -1.12
SDE2-201ENST00000272091 SPAG11BQ08648 103 aa8.07□□□□□ -1.12
SDE2-201ENST00000272091 C15orf56Q8N910 161 aa8.07□□□□□ -1.12
SDE2-201ENST00000272091 PPDPFQ9H3Y8 114 aa8.07□□□□□ -1.12
SDE2-201ENST00000272091 PFN2P35080 140 aa8.06□□□□□ -1.12
SDE2-201ENST00000272091 RNF151Q2KHN1 245 aa8.06□□□□□ -1.12
SDE2-201ENST00000272091 SFTA2Q6UW10 78 aa8.06□□□□□ -1.12
SDE2-201ENST00000272091 C9orf116Q5BN46 136 aaPredicted RBP8.06□□□□□ -1.12
SDE2-201ENST00000272091 FABP2P12104 132 aa8.06□□□□□ -1.12
SDE2-201ENST00000272091 LINC00158P58513 81 aa8.06□□□□□ -1.12
SDE2-201ENST00000272091 CFAP161Q6P656 301 aa8.05□□□□□ -1.12
SDE2-201ENST00000272091 UNQ6190/PRO20217Q6UXQ8 127 aa8.05□□□□□ -1.12
SDE2-201ENST00000272091 SPCS1Q9Y6A9 102 aa8.05□□□□□ -1.12
SDE2-201ENST00000272091 CXCL5P42830 114 aa8.05□□□□□ -1.12
SDE2-201ENST00000272091 CKS1BP61024 79 aa8.05□□□□□ -1.12
SDE2-201ENST00000272091 NTN5Q8WTR8 489 aaPredicted RBP8.04□□□□□ -1.12
SDE2-201ENST00000272091 GAGE10A6NGK3 116 aa8.04□□□□□ -1.12
SDE2-201ENST00000272091 KRTAP1-5Q9BYS1 174 aa8.04□□□□□ -1.12
SDE2-201ENST00000272091 Q9HAA7 133 aa8.04□□□□□ -1.12
SDE2-201ENST00000272091 IGKV2D-24A0A075B6R9 120 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 CASC10Q5T4H9 136 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 C1orf43Q9BWL3 253 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 SMCPP49901 116 aaPredicted RBP8.03□□□□□ -1.12
SDE2-201ENST00000272091 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 IGKV2-28A0A075B6P5 120 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 IGKV2D-28P01615 120 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 HIGD2BQ4VC39 106 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 H7C2G1 150 aa8.03□□□□□ -1.12
SDE2-201ENST00000272091 C6orf48Q9UBA6 75 aa8.02□□□□□ -1.13
SDE2-201ENST00000272091 LOC107984156A0A0G2JMH3 177 aa8.01□□□□□ -1.13
SDE2-201ENST00000272091 ARL17AQ8IVW1 177 aa8.01□□□□□ -1.13
SDE2-201ENST00000272091 RPL13AP40429 203 aaKnown RBP8.01□□□□□ -1.13
SDE2-201ENST00000272091 Q8NDZ9 215 aa8.01□□□□□ -1.13
SDE2-201ENST00000272091 COX17Q14061 63 aa8.01□□□□□ -1.13
SDE2-201ENST00000272091 GTF2H5Q6ZYL4 71 aa8.01□□□□□ -1.13
SDE2-201ENST00000272091 VPS13DQ5THJ4 4388 aa8.01□□□□□ -1.13
SDE2-201ENST00000272091 GVQW2A0A096LPI5 108 aaPredicted RBP8□□□□□ -1.13
SDE2-201ENST00000272091 COPS9Q8WXC6 57 aa8□□□□□ -1.13
SDE2-201ENST00000272091 SND1-IT1Q9HBX3 110 aa8□□□□□ -1.13
SDE2-201ENST00000272091 LINC00337Q8N6G1 96 aa8□□□□□ -1.13
SDE2-201ENST00000272091 TRIAP1O43715 76 aa8□□□□□ -1.13
SDE2-201ENST00000272091 WFDC2Q14508 124 aa8□□□□□ -1.13
SDE2-201ENST00000272091 NUPR2A6NF83 97 aa7.99□□□□□ -1.13
SDE2-201ENST00000272091 TCL1BO95988 128 aa7.99□□□□□ -1.13
SDE2-201ENST00000272091 H3BMG7 143 aa7.98□□□□□ -1.13
SDE2-201ENST00000272091 Q6ZRU5 148 aa7.98□□□□□ -1.13
SDE2-201ENST00000272091 FBN3Q75N90 2809 aa7.98□□□□□ -1.13
SDE2-201ENST00000272091 TRBV30A0A0K0K1B3 111 aa7.98□□□□□ -1.13
SDE2-201ENST00000272091 ZNF561-AS1K7EIQ3 104 aa7.97□□□□□ -1.13
SDE2-201ENST00000272091 Q1RN00 199 aa7.97□□□□□ -1.13
SDE2-201ENST00000272091 MTURNQ8N3F0 131 aa7.97□□□□□ -1.13
SDE2-201ENST00000272091 C2orf48Q96LS8 159 aa7.96□□□□□ -1.13
SDE2-201ENST00000272091 SLPIP03973 132 aa7.96□□□□□ -1.13
SDE2-201ENST00000272091 PSMB2P49721 201 aa7.96□□□□□ -1.13
SDE2-201ENST00000272091 CAMK2N2Q96S95 79 aa7.96□□□□□ -1.13
SDE2-201ENST00000272091 PRR3P79522 188 aaKnown RBP7.96□□□□□ -1.14
SDE2-201ENST00000272091 UBE2DNLQ8IWF7 75 aa7.96□□□□□ -1.14
SDE2-201ENST00000272091 TENM2Q9NT68 2774 aa7.96□□□□□ -1.14
SDE2-201ENST00000272091 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
SDE2-201ENST00000272091 VPS25Q9BRG1 176 aa7.94□□□□□ -1.14
SDE2-201ENST00000272091 TRAV13-2A0A0B4J235 113 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms