RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SPANXDQ9BXN6 97 aa11.04□□□□□ -0.64
LRFN1-201ENST00000248668 SPANXCQ9NY87 97 aa11.04□□□□□ -0.64
LRFN1-201ENST00000248668 CLEC2BQ92478 149 aa11.03□□□□□ -0.64
LRFN1-201ENST00000248668 C11orf68Q9H3H3 251 aaKnown RBP11.03□□□□□ -0.64
LRFN1-201ENST00000248668 C5orf38Q86SI9 138 aa11.03□□□□□ -0.64
LRFN1-201ENST00000248668 hADV29S1A0JD25 119 aa11.02□□□□□ -0.64
LRFN1-201ENST00000248668 CIRBPQ14011 172 aaKnown RBP11.02□□□□□ -0.64
LRFN1-201ENST00000248668 RPL13AP40429 203 aaKnown RBP11.02□□□□□ -0.65
LRFN1-201ENST00000248668 TRBV10-2A0A0K0K1G8 114 aa11.02□□□□□ -0.65
LRFN1-201ENST00000248668 HTN3P15516 51 aa11.02□□□□□ -0.65
LRFN1-201ENST00000248668 C4orf26Q17RF5 130 aa11.01□□□□□ -0.65
LRFN1-201ENST00000248668 H7C423 109 aa11.01□□□□□ -0.65
LRFN1-201ENST00000248668 KIR2DL5BQ8NHK3 375 aa11□□□□□ -0.65
LRFN1-201ENST00000248668 SOSTDC1Q6X4U4 206 aa11□□□□□ -0.65
LRFN1-201ENST00000248668 LINC00308Q8TCZ7 52 aa11□□□□□ -0.65
LRFN1-201ENST00000248668 DSCR8Q96T75 97 aa11□□□□□ -0.65
LRFN1-201ENST00000248668 ICOSQ9Y6W8 199 aa11□□□□□ -0.65
LRFN1-201ENST00000248668 Q8N3U1 123 aa10.99□□□□□ -0.65
LRFN1-201ENST00000248668 C3orf22Q8N5N4 141 aa10.99□□□□□ -0.65
LRFN1-201ENST00000248668 IGHV4-28A0A0C4DH34 117 aa10.99□□□□□ -0.65
LRFN1-201ENST00000248668 XCL1P47992 114 aa10.99□□□□□ -0.65
LRFN1-201ENST00000248668 PAX4O43316 350 aa10.98□□□□□ -0.65
LRFN1-201ENST00000248668 CELA1Q9UNI1 258 aa10.98□□□□□ -0.65
LRFN1-201ENST00000248668 PKD1L1Q8TDX9 2849 aa10.98□□□□□ -0.65
LRFN1-201ENST00000248668 PRO0255Q9UI72 69 aa10.97□□□□□ -0.65
LRFN1-201ENST00000248668 FAM19A3Q7Z5A8 133 aa10.97□□□□□ -0.65
LRFN1-201ENST00000248668 COX7B2Q8TF08 81 aa10.96□□□□□ -0.65
LRFN1-201ENST00000248668 TIMM17BO60830 172 aa10.96□□□□□ -0.66
LRFN1-201ENST00000248668 C1orf43Q9BWL3 253 aa10.96□□□□□ -0.66
LRFN1-201ENST00000248668 DAD1P61803 113 aa10.95□□□□□ -0.66
LRFN1-201ENST00000248668 LINC00612Q8N6U2 182 aa10.95□□□□□ -0.66
LRFN1-201ENST00000248668 PKIGQ9Y2B9 76 aa10.95□□□□□ -0.66
LRFN1-201ENST00000248668 PFN2P35080 140 aa10.94□□□□□ -0.66
LRFN1-201ENST00000248668 IGLV10-54A0A075B6I4 117 aa10.94□□□□□ -0.66
LRFN1-201ENST00000248668 IGHV3OR16-9A0A0B4J2B5 98 aa10.94□□□□□ -0.66
LRFN1-201ENST00000248668 TRBV30A0A0K0K1B3 111 aa10.94□□□□□ -0.66
LRFN1-201ENST00000248668 LINC00959A0A1B0GUT2 108 aa10.94□□□□□ -0.66
LRFN1-201ENST00000248668 APOC4P55056 127 aa10.94□□□□□ -0.66
LRFN1-201ENST00000248668 LINC00158P58513 81 aa10.93□□□□□ -0.66
LRFN1-201ENST00000248668 OXLD1Q5BKU9 147 aa10.93□□□□□ -0.66
LRFN1-201ENST00000248668 MIR7-3HGQ8N6C7 128 aa10.93□□□□□ -0.66
LRFN1-201ENST00000248668 UQCRQO14949 82 aa10.93□□□□□ -0.66
LRFN1-201ENST00000248668 IGHV4-30-4P0DP06 118 aa10.93□□□□□ -0.66
LRFN1-201ENST00000248668 COX6CP09669 75 aa10.92□□□□□ -0.66
LRFN1-201ENST00000248668 SMCR5Q8TEV8 140 aa10.91□□□□□ -0.66
LRFN1-201ENST00000248668 LYRM9A8MSI8 78 aa10.91□□□□□ -0.66
LRFN1-201ENST00000248668 LINC00269Q8N2A0 174 aa10.91□□□□□ -0.66
LRFN1-201ENST00000248668 TRACP01848 142 aa10.9□□□□□ -0.66
LRFN1-201ENST00000248668 TRBV7-7A0A0K0K1E9 115 aa10.9□□□□□ -0.66
LRFN1-201ENST00000248668 Q8NAQ8 132 aa10.9□□□□□ -0.67
LRFN1-201ENST00000248668 CYSTM1Q9H1C7 97 aa10.9□□□□□ -0.67
LRFN1-201ENST00000248668 C6orf226Q5I0X4 101 aa10.89□□□□□ -0.67
LRFN1-201ENST00000248668 RETNQ9HD89 108 aa10.89□□□□□ -0.67
LRFN1-201ENST00000248668 ANGP03950 147 aaKnown RBP10.89□□□□□ -0.67
LRFN1-201ENST00000248668 A0A087WZ39 114 aa10.88□□□□□ -0.67
LRFN1-201ENST00000248668 ANK2Q01484 3957 aa10.88□□□□□ -0.67
LRFN1-201ENST00000248668 SS18Q15532 418 aa10.87□□□□□ -0.67
LRFN1-201ENST00000248668 TENM3Q9P273 2699 aa10.87□□□□□ -0.67
LRFN1-201ENST00000248668 H3BT86 120 aa10.87□□□□□ -0.67
LRFN1-201ENST00000248668 ATP5G1P05496 136 aa10.87□□□□□ -0.67
LRFN1-201ENST00000248668 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
LRFN1-201ENST00000248668 LINC00526Q96FQ7 95 aa10.86□□□□□ -0.67
LRFN1-201ENST00000248668 SND1-IT1Q9HBX3 110 aa10.86□□□□□ -0.67
LRFN1-201ENST00000248668 SDIM1Q6ZPB5 146 aa10.85□□□□□ -0.67
LRFN1-201ENST00000248668 A0A1B0GX51 115 aa10.85□□□□□ -0.67
LRFN1-201ENST00000248668 LST1O00453 97 aa10.85□□□□□ -0.67
LRFN1-201ENST00000248668 SPART-AS1P0CW21 52 aa10.84□□□□□ -0.67
LRFN1-201ENST00000248668 FAM240AA0A1B0GVK7 77 aa10.84□□□□□ -0.67
LRFN1-201ENST00000248668 COX7CP15954 63 aa10.84□□□□□ -0.67
LRFN1-201ENST00000248668 LINC00337Q8N6G1 96 aa10.84□□□□□ -0.67
LRFN1-201ENST00000248668 WFDC9Q8NEX5 89 aa10.84□□□□□ -0.67
LRFN1-201ENST00000248668 MIFP14174 115 aa10.83□□□□□ -0.67
LRFN1-201ENST00000248668 CCL18P55774 89 aa10.83□□□□□ -0.67
LRFN1-201ENST00000248668 A0A1B0GUV1 79 aa10.83□□□□□ -0.68
LRFN1-201ENST00000248668 COPS9Q8WXC6 57 aa10.83□□□□□ -0.68
LRFN1-201ENST00000248668 CRPP02741 224 aa10.82□□□□□ -0.68
LRFN1-201ENST00000248668 CHCHD10Q8WYQ3 142 aaPredicted RBP10.82□□□□□ -0.68
LRFN1-201ENST00000248668 IGKV2-28A0A075B6P5 120 aa10.82□□□□□ -0.68
LRFN1-201ENST00000248668 IGKV2D-28P01615 120 aa10.82□□□□□ -0.68
LRFN1-201ENST00000248668 REG3AQ06141 175 aa10.82□□□□□ -0.68
LRFN1-201ENST00000248668 A0A087WVE0 104 aa10.82□□□□□ -0.68
LRFN1-201ENST00000248668 KRTAP10-11P60412 298 aa10.82□□□□□ -0.68
LRFN1-201ENST00000248668 A0A0U1RQV1 116 aa10.81□□□□□ -0.68
LRFN1-201ENST00000248668 WIPF1O43516 503 aa10.81□□□□□ -0.68
LRFN1-201ENST00000248668 C9orf116Q5BN46 136 aaPredicted RBP10.8□□□□□ -0.68
LRFN1-201ENST00000248668 COX7A2LO14548 114 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 OXTP01178 125 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 KRTAP24-1Q3LI83 254 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 FAM218AQ96MZ4 157 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 MALP21145 153 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 DPH3Q96FX2 82 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 LINC01600Q96MT4 127 aa10.8□□□□□ -0.68
LRFN1-201ENST00000248668 KLK12Q9UKR0 248 aa10.79□□□□□ -0.68
LRFN1-201ENST00000248668 IBA57-AS1B1ANH7 110 aa10.79□□□□□ -0.68
LRFN1-201ENST00000248668 PRR3P79522 188 aaKnown RBP10.78□□□□□ -0.68
LRFN1-201ENST00000248668 DEFB121Q5J5C9 76 aa10.78□□□□□ -0.68
LRFN1-201ENST00000248668 Q9HAA7 133 aa10.78□□□□□ -0.68
LRFN1-201ENST00000248668 LINC00643Q86TS7 51 aa10.78□□□□□ -0.68
LRFN1-201ENST00000248668 HIST1H4AP62805 103 aaKnown RBP10.77□□□□□ -0.68
LRFN1-201ENST00000248668 TRAV13-2A0A0B4J235 113 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms