RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 TRBV6-8A0A0A6YYG3 113 aa5.47□□□□□ -1.53
CXCR4-201ENST00000241393 SMIM9A6NGZ8 99 aa5.47□□□□□ -1.53
CXCR4-201ENST00000241393 WFDC10AQ9H1F0 79 aa5.47□□□□□ -1.53
CXCR4-201ENST00000241393 CDK2AP2O75956 126 aa5.46□□□□□ -1.54
CXCR4-201ENST00000241393 MEIG1Q5JSS6 88 aa5.46□□□□□ -1.54
CXCR4-201ENST00000241393 FAM222AQ5U5X8 452 aa5.46□□□□□ -1.54
CXCR4-201ENST00000241393 UNC79Q9P2D8 2635 aa5.46□□□□□ -1.54
CXCR4-201ENST00000241393 COX7A2LO14548 114 aa5.45□□□□□ -1.54
CXCR4-201ENST00000241393 C2orf82Q6UX34 121 aa5.45□□□□□ -1.54
CXCR4-201ENST00000241393 UBE2WQ96B02 151 aa5.45□□□□□ -1.54
CXCR4-201ENST00000241393 IGHV3OR16-9A0A0B4J2B5 98 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 A0A1B0GV72 72 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 NPC2P61916 151 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 DEFB121Q5J5C9 76 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 SOSTDC1Q6X4U4 206 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 LINC01561Q8N1V8 128 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 DAND5Q8N907 189 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 COX7B2Q8TF08 81 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 ITPR2Q14571 2701 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 PDZD2O15018 2839 aa5.44□□□□□ -1.54
CXCR4-201ENST00000241393 A0A087WZ39 114 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 TRAV13-2A0A0B4J235 113 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 LOC100131303A0A0U1RQF7 123 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 FAM240AA0A1B0GVK7 77 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 XGP55808 180 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 AKAP9Q99996 3911 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 TRAV26-1A0A087WT03 109 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 IBA57-AS1B1ANH7 110 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 TRACP01848 142 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 MRPL23Q16540 153 aaKnown RBP5.43□□□□□ -1.54
CXCR4-201ENST00000241393 CHCHD5Q9BSY4 110 aa5.43□□□□□ -1.54
CXCR4-201ENST00000241393 IGLV4-60A0A075B6I1 120 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 TRAV8-4A0A0B4J246 113 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 LYRM9A8MSI8 78 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 CRLF1O75462 422 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 MT-ATP8P03928 68 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 C9orf66Q5T8R8 295 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 CLEC2BQ92478 149 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 PRO0255Q9UI72 69 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 ACANP16112 2415 aa5.42□□□□□ -1.54
CXCR4-201ENST00000241393 ZNF469Q96JG9 3925 aaPredicted RBP5.41□□□□□ -1.54
CXCR4-201ENST00000241393 TEX49A0A1B0GTD5 131 aa5.41□□□□□ -1.54
CXCR4-201ENST00000241393 LINC01547P58512 204 aaPredicted RBP5.41□□□□□ -1.54
CXCR4-201ENST00000241393 KRTAP10-3P60369 221 aa5.41□□□□□ -1.54
CXCR4-201ENST00000241393 KRTAP5-3Q6L8H2 238 aa5.41□□□□□ -1.54
CXCR4-201ENST00000241393 NOTCH3Q9UM47 2321 aa5.41□□□□□ -1.54
CXCR4-201ENST00000241393 GCN1Q92616 2671 aaKnown RBP5.41□□□□□ -1.54
CXCR4-201ENST00000241393 LINC00959A0A1B0GUT2 108 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 CRPP02741 224 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 RPL28P46779 137 aaKnown RBP5.4□□□□□ -1.54
CXCR4-201ENST00000241393 Q6Q795 121 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 CITED1Q99966 193 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 JMJD1CQ15652 2540 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 C2CD3Q4AC94 2353 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 MTORP42345 2549 aa5.4□□□□□ -1.54
CXCR4-201ENST00000241393 FASNP49327 2511 aaKnown RBP5.4□□□□□ -1.54
CXCR4-201ENST00000241393 HIVEP2P31629 2446 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 NF1P21359 2839 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 A0A0U1RRA0 63 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 ACYP1P07311 99 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 DEFB130BP0DP73 79 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 DEFB130AP0DP74 79 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 SS18Q15532 418 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 MIR7-3HGQ8N6C7 128 aa5.4□□□□□ -1.55
CXCR4-201ENST00000241393 ANK3Q12955 4377 aaKnown RBP5.39□□□□□ -1.55
CXCR4-201ENST00000241393 SETXQ7Z333 2677 aaKnown RBP5.39□□□□□ -1.55
CXCR4-201ENST00000241393 SNCGO76070 127 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 APOC4P55056 127 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 CKS1BP61024 79 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 LCE1AQ5T7P2 110 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 Q8IZM0 81 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 SND1-IT1Q9HBX3 110 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 TOMM7Q9P0U1 55 aa5.39□□□□□ -1.55
CXCR4-201ENST00000241393 SETD2Q9BYW2 2564 aaPredicted RBP5.38□□□□□ -1.55
CXCR4-201ENST00000241393 LY6G6DO95868 133 aa5.38□□□□□ -1.55
CXCR4-201ENST00000241393 LINC00158P58513 81 aa5.38□□□□□ -1.55
CXCR4-201ENST00000241393 HECTD1Q9ULT8 2610 aa5.38□□□□□ -1.55
CXCR4-201ENST00000241393 IGKV2-28A0A075B6P5 120 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 NBPF19A0A087WUL8 3843 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 H0YGX0 51 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 IGKV2D-28P01615 120 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 CCL18P55774 89 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 IGKV3OR2-268A0A0C4DH90 116 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 CXCL5P42830 114 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 C6orf226Q5I0X4 101 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 C5orf38Q86SI9 138 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 LINC00337Q8N6G1 96 aa5.37□□□□□ -1.55
CXCR4-201ENST00000241393 MIFP14174 115 aa5.36□□□□□ -1.55
CXCR4-201ENST00000241393 CD164L2Q6UWJ8 174 aa5.36□□□□□ -1.55
CXCR4-201ENST00000241393 SMR3AQ99954 134 aa5.36□□□□□ -1.55
CXCR4-201ENST00000241393 BAALC-AS2P0C853 105 aa5.35□□□□□ -1.55
CXCR4-201ENST00000241393 INAFM2P0DMQ5 153 aa5.35□□□□□ -1.55
CXCR4-201ENST00000241393 COX17Q14061 63 aa5.35□□□□□ -1.55
CXCR4-201ENST00000241393 C15orf53Q8NAA6 179 aa5.35□□□□□ -1.55
CXCR4-201ENST00000241393 MUC7Q8TAX7 377 aa5.35□□□□□ -1.55
CXCR4-201ENST00000241393 NOTCH2Q04721 2471 aa5.35□□□□□ -1.55
CXCR4-201ENST00000241393 XCL1P47992 114 aa5.34□□□□□ -1.55
CXCR4-201ENST00000241393 DAD1P61803 113 aa5.34□□□□□ -1.55
CXCR4-201ENST00000241393 SMIM11BQ8TCY0 68 aa5.34□□□□□ -1.55
CXCR4-201ENST00000241393 FAM218AQ96MZ4 157 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms